BAC Information

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BAC

Clone NameB6Ng01-116O18
Chromosome14 (Build37)
Map Location 60,451,754 - 60,644,570
singlet/doubletdoublet
Overlap geneAtp8a2
Upstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream geneLOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep, LOC100043586, Tnfrsf19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116O18.bB6Ng01-116O18.g
ACCDH921798DH921799
length1,001777
definitionDH921798|Mus musculus domesticus DNA, BAC clone: B6Ng01-116O18, 5' end.DH921799|Mus musculus domesticus DNA, BAC clone: B6Ng01-116O18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,644,036 - 60,644,570)(60,451,754 - 60,452,527)
sequence
gaattctgcctgcctcttccattgaactactgcaaggcagaacctttttg
ggaaacataaaatttattcataacctaaagtaattaaagactatgatttt
attttacacaacttatacctccaaacaatcaaatttatcctcaacctaaa
gtaattaaagactatggttttatttttatgtatcgtaatcctcccagcaa
tccacttgggaggtggtggattaccacatgctcattttatagatttgtga
ttaggtcatctcagggaagcctgctgatgaatgacaggtggaggactgga
gattacctaagtctggcctttgtttccctgcagcacctgccacatgcccc
tctgggaagatgtaagcctaacttctccttcatctgggggccaggaatag
ggtcagatgccctctccctcttctctctccttaaggacagaatcagtcct
gcagtgacatcagagcattttgagtcattgctagaaagttgaaactcaga
tttctcagtcaaattttgtaataaaatagaataaaatcacatgctgcccc
tgtgctggtggtcctgggttctgtagaaagcagctaagcgagccatgggg
agcaagccagtgtgcggtaaacctccatggcctctgtatcagctcctgcc
tctaactttcactcctgagtccctgccatgacttccttcagagatagagt
atgacctaagagttggaaggaagaataaaaccttcctcccgagttgcttt
tggtcatcatggtttattacggcagtagatacccccgatagcagccacga
gttacctgtgctagggatacagcctggtgaaaatttctctttccaagtta
gctatctgttggtgctgtcattgcttaggtcttgttgaggtagcatgggt
tgtagcttcccttttgtttccaggagacacacttccacactagccttctt
gctctctggttctatggtcttttcacctcctcttcctccatgatcctgag
c
gaattcataaggcagactttgtgatggagatttttgtcttcccatcacat
tgtggggttcacaacctgaatggtcatttaaatgcagctcatgcagatgt
gtcaaaatccagtaaacatcaggaagatcattctgggtaccctgctaaca
cgtgggacaccgctgaataacacttatctaggagggagaattatttgtaa
agacaaatacagatatgagctttcaggacagtggaagggcttcaaacata
tccagtgataccctgtcttgcttgtggcaccctattcggtgatgatcact
ttgttctgtgagtcttaggataatcatttgaccttttttttttctttcca
ttttttattaggtatttagctcatttacatttccaatgctataccaaaag
tcccccatacccacccacccccactcccctacccacccactccccctttt
tggccctggcgttcccctgttctggggcatataaagtttgcgtgtccaat
gggcctctctttccagtgatggccgactaggccatcttttgatacatatg
cagctagagtcaagagctctggggtactggttagttcataatgttgatcc
acctatagggttgcagatccctttagctccttggggtactttctctagct
cctccattgggagccctgtgatccatccattagctgactgtgggcatcca
ctttctgtgttttgctaggccccggcatattctcacaagagacagcttac
atctgggtcctttcataaaatcttgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60644036_60644570
seq2: B6Ng01-116O18.b_46_580 (reverse)

seq1  TTTATTCTATTTTATTACAAAATTTGACTGAGAAATCTGAGTTTCAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTATTTTATTACAAAATTTGACTGAGAAATCTGAGTTTCAACTT  50

seq1  TCTAGCAATGACTCAAAATGCTCTGATGTCACTGCAGGACTGATTCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCAATGACTCAAAATGCTCTGATGTCACTGCAGGACTGATTCTGTC  100

seq1  CTTAAGGAGAGAGAAGAGGGAGAGGGCATCTGACCCTATTCCTGGCCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGAGAGAGAAGAGGGAGAGGGCATCTGACCCTATTCCTGGCCCCC  150

seq1  AGATGAAGGAGAAGTTAGGCTTACATCTTCCCAGAGGGGCATGTGGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAGGAGAAGTTAGGCTTACATCTTCCCAGAGGGGCATGTGGCAGG  200

seq1  TGCTGCAGGGAAACAAAGGCCAGACTTAGGTAATCTCCAGTCCTCCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAGGGAAACAAAGGCCAGACTTAGGTAATCTCCAGTCCTCCACCT  250

seq1  GTCATTCATCAGCAGGCTTCCCTGAGATGACCTAATCACAAATCTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCATCAGCAGGCTTCCCTGAGATGACCTAATCACAAATCTATAAA  300

seq1  ATGAGCATGTGGTAATCCACCACCTCCCAAGTGGATTGCTGGGAGGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCATGTGGTAATCCACCACCTCCCAAGTGGATTGCTGGGAGGATTA  350

seq1  CGATACATAAAAATAAAACCATAGTCTTTAATTACTTTAGGTTGAGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATACATAAAAATAAAACCATAGTCTTTAATTACTTTAGGTTGAGGATA  400

seq1  AATTTGATTGTTTGGAGGTATAAGTTGTGTAAAATAAAATCATAGTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATTGTTTGGAGGTATAAGTTGTGTAAAATAAAATCATAGTCTTT  450

seq1  AATTACTTTAGGTTATGAATAAATTTTATGTTTCCCAAAAAGGTTCTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTTAGGTTATGAATAAATTTTATGTTTCCCAAAAAGGTTCTGCC  500

seq1  TTGCAGTAGTTCAATGGAAGAGGCAGGCAGAATTC  535
      |||||||||||||||||||||||||||||||||||
seq2  TTGCAGTAGTTCAATGGAAGAGGCAGGCAGAATTC  535

seq1: chr14_60451754_60452527
seq2: B6Ng01-116O18.g_71_847

seq1  GAATTCATAAGGCAGACTTTGTGATGGAGATTTTTGTCTTCCCATCACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGGCAGACTTTGTGATGGAGATTTTTGTCTTCCCATCACAT  50

seq1  TGTGGGGTTCACAACCTGAATGGTCATTTAAATGCAGCTCATGCAGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGTTCACAACCTGAATGGTCATTTAAATGCAGCTCATGCAGATGT  100

seq1  GTCAAAATCCAGTAAACATCAGGAAGATCATTCTGGGTACCCTGCTAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAATCCAGTAAACATCAGGAAGATCATTCTGGGTACCCTGCTAACA  150

seq1  CGTGGGACACCGCTGAATAACACTTATCTAGGAGGGAGAATTATTTGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGACACCGCTGAATAACACTTATCTAGGAGGGAGAATTATTTGTAA  200

seq1  AGACAAATACAGATATGAGCTTTCAGGACAGTGGAAGGGCTTCAAACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATACAGATATGAGCTTTCAGGACAGTGGAAGGGCTTCAAACATA  250

seq1  TCCAGTGATACCCTGTCTTGCTTGTGGCACCCTATTCGGTGATGATCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGATACCCTGTCTTGCTTGTGGCACCCTATTCGGTGATGATCACT  300

seq1  TTGTTCTGTGAGTCTTAGGATAATCATTTGACCTTTTTTTTTTCTTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGTGAGTCTTAGGATAATCATTTGACCTTTTTTTTTTCTTTCCA  350

seq1  TTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAG  400

seq1  TCCCCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCATACCCACCCACCCCCACTCCCCTACCCACCCACTCCCCCTTTT  450

seq1  TGGCCCTGGCGTTCCCCTGTTCTGGGGCATATAAAGTTTGCGTGTCCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGGCGTTCCCCTGTTCTGGGGCATATAAAGTTTGCGTGTCCAAT  500

seq1  GGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATG  550

seq1  CAGCTAGAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGATCC  600

seq1  ACCTATAGGGTTGCAGATCCCTTTAGCTCCTT-GGGTACTTTCTCTAGCT  649
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGGTACTTTCTCTAGCT  650

seq1  CCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGGGCATCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGGGCATCCA  700

seq1  C-TTCTGTG-TTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGC-TAC  746
      | ||||||| ||||||||||||||||||| |||||||||||||||| |||
seq2  CTTTCTGTGTTTTGCTAGGCCCCGGCATATTCTCACAAGAGACAGCTTAC  750

seq1  ATCTGGGTCCTTTCGATAAAATCTTGCT  774
      |||||||||||||| |||||||||||||
seq2  ATCTGGGTCCTTTC-ATAAAATCTTGCT  777