BAC Information

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BAC

Clone NameB6Ng01-117O17
Chromosome14 (Build37)
Map Location 45,696,782 - 45,871,015
singlet/doubletdoublet
Overlap geneLOC100041591, 5730420B22Rik, LOC100041611
Upstream geneLOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr, Ptger2
Downstream gene6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884, Ddhd1, EG637379, LOC666834, LOC100041685, LOC625377, LOC218963
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117O17.bB6Ng01-117O17.g
ACCDH922533DH922534
length1,1851,046
definitionDH922533|Mus musculus domesticus DNA, BAC clone: B6Ng01-117O17, 5' end.DH922534|Mus musculus domesticus DNA, BAC clone: B6Ng01-117O17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,696,782 - 45,697,987)(45,869,964 - 45,871,015)
sequence
gaattccaaatccagccaagttgacaatgaagattaactacagcagctta
cacctaggcagtacttccactctgtgtctgctaacatctcttgatcttaa
taacatgggcagttgttataaaattcatgacccctggagaaagaccatag
gcacaatccagattatattagtcaattttattgatactgctagcaaaaca
agctctgagccaaccttgagactgctatgagacagaggcagggggaagga
ttttcagagatgaaaaccacaagaagaccttgagtatctgctagcaagcc
aaggctgttgtgtctgtcaagattagggagtgaaggcaacctccaaatag
tccttgaatgtctgcataaggaggttacagaagccaaaaggcagttagct
gtatcataacaagtaaatggtcacagctgtaacctttctgggtcggggag
tcactgtgttagggttcctgggaacttagctcctagggactggagtcaaa
gacaaacccctagtgggtactaagatggacgctagcataaaatggagttt
ctctggccatcccacagtgatctccaaggcagctcaagtgtagtagctgg
tactctcactaatcctccacccaggtcttagtgtacccaggactctgcat
ttccccagtgactgatggccaatgtgatccactgcatctcctcacatgcc
aaccaacaggctgtatcttccctgcctccactctcttctctctcttctgt
gctcagcccaggcctttccttaagagccactgtcaggagagtgtgttctg
acatcctcccccaaccttccgtgctgacctgtggccacaggagctctttc
tgttccttcccatcagatccacagatgcttcctggagccatcccttcccc
ttcacttccctctcttcctgcctaacccataccaggaagtcatgagcacc
atccttctgccagtttccccagcatgtggaaatggcagccagtgtaagtg
ggggcctgggggtggaagaagtagagaaactttgttcctgagactgtaag
aaaataattcttggagtatccactgggcagctggaacaaatagcaagaaa
tagtgggggagagttggtttcttccatgctggggccatattataggttta
ggaccttacagactcgtggactgtcaagaatgaaa
gaattccataaaataaggactttaaaaaattgataggggctaaccacatg
tttgtttctgaatgggagacatactaacccgaggatagaattttaatcgg
tgaccttttttccttttggtgttaaaaatgaaaaagaaaatctttttttt
ttggagagtctgtgtagttaacaccatcaacagcattacacagcagactg
atgactttaaaagttttcaaatacttattgacttattaatgtgtgttttc
ttaagcacatacaccactcactgcacagtttactctcttcccaccgtgtg
gatgtggggatcaaactcaggttgtcaggctcggcaccaagccaagatgg
cagagccatctagcactcaccagaacaaagcctctttattgttactcata
tgtgtgtaggcgtgcatgaatatacaccacatgtatgtgtagctacctgc
agaggtcagaaagagcacagatctcctggagctgggtctggaaagtgacc
cataactgaggatgacactcaggagcccaggagaggccgcaccagcccct
agaacaaaccttctttttaagaaaattcttttaaatatcttgatgtaggc
cagaacatggtgtctgtcacagtctaggacagaaaaaggcaactattcca
gggtattactcaggcttaattaaaaactacactgatgtagatagagttga
gcgcaaaatatatattacaaggtgaaacagactgtacaccattcaggtca
tatttctgacaaacttgtgaatctagcagtgagaatttattctgacaaca
acctagaatacaggaactttaggtcagttatcttggtggaaagcaagcag
agggtaaaactggtaactttttatggaagctggggggtcctaaagaaaac
agaaatctgattttccatttcttgcggtgagctaattgagatactgtgta
tcaaccctgacttgtaaggagtacgaagtgcatgaaaacatggttgaaat
ctaaattttttttcttttaaatatcattttaaagatatttgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_45696782_45697987
seq2: B6Ng01-117O17.b_51_1235

seq1  GAATTCCAAATCCAGCCAAGTTGACAATGAAGATTAACTACAGCAGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATCCAGCCAAGTTGACAATGAAGATTAACTACAGCAGCTTA  50

seq1  CACCTAGGCAGTACTTCCACTCTGTGTCTGCTAACATCTCTTGATCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGGCAGTACTTCCACTCTGTGTCTGCTAACATCTCTTGATCTTAA  100

seq1  TAACATGGGCAGTTGTTATAAAATTCATGACCCCTGGAGAAAGACCATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGGGCAGTTGTTATAAAATTCATGACCCCTGGAGAAAGACCATAG  150

seq1  GCACAATCCAGATTATATTAGTCAATTTTATTGATACTGCTAGCAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAATCCAGATTATATTAGTCAATTTTATTGATACTGCTAGCAAAACA  200

seq1  AGCTCTGAGCCAACCTTGAGACTGCTATGAGACAGAGGCAGGGGGAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGAGCCAACCTTGAGACTGCTATGAGACAGAGGCAGGGGGAAGGA  250

seq1  TTTTCAGAGATGAAAACCACAAGAAGACCTTGAGTATCTGCTAGCAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAGATGAAAACCACAAGAAGACCTTGAGTATCTGCTAGCAAGCC  300

seq1  AAGGCTGTTGTGTCTGTCAAGATTAGGGAGTGAAGGCAACCTCCAAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGTTGTGTCTGTCAAGATTAGGGAGTGAAGGCAACCTCCAAATAG  350

seq1  TCCTTGAATGTCTGCATAAGGAGGTTACAGAAGCCAAAAGGCAGTTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAATGTCTGCATAAGGAGGTTACAGAAGCCAAAAGGCAGTTAGCT  400

seq1  GTATCATAACAAGTAAATGGTCACAGCTGTAACCTTTCTGGGTCGGGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATAACAAGTAAATGGTCACAGCTGTAACCTTTCTGGGTCGGGGAG  450

seq1  TCACTGTGTTAGGGTTCCTGGGAACTTAGCTCCTAGGGACTGGAGTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTGTTAGGGTTCCTGGGAACTTAGCTCCTAGGGACTGGAGTCAAA  500

seq1  GACAAACCCCTAGTGGGTACTAAGATGGACGCTAGCATAAAATGGAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACCCCTAGTGGGTACTAAGATGGACGCTAGCATAAAATGGAGTTT  550

seq1  CTCTGGCCATCCCACAGTGATCTCCAAGGCAGCTCAAGTGTAGTAGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCCATCCCACAGTGATCTCCAAGGCAGCTCAAGTGTAGTAGCTGG  600

seq1  TACTCTCACTAATCCTCCACCCAGGTCTTAGTGTACCCAGGACTCTGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCACTAATCCTCCACCCAGGTCTTAGTGTACCCAGGACTCTGCAT  650

seq1  TTCCCCAGTGACTGATGGCCAATGTGATCCACTGCATCTCCTCACATGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGTGACTGATGGCCAATGTGATCCACTGCATCTCCTCACATGCC  700

seq1  AACCAACAGGCTGTATCTTCCCTGCCTCCACTCTCTTCTCTCTCTTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACAGGCTGTATCTTCCCTGCCTCCACTCTCTTCTCTCTCTTCTGT  750

seq1  GCTCAGCCCAGGCCTTTCCTTAAGAGCCACTGTCAGGAGAGTGTGTTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCCCAGGCCTTTCCTTAAGAGCCACTGTCAGGAGAGTGTGTTCTG  800

seq1  ACATCCTCCCCCAACCTTCCGTGCTGACCTGTGGCCACAGGAGCTCTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTCCCCCAACCTTCCGTGCTGACCTGTGGCCACAGGAGCTCTTTC  850

seq1  TGTTCCTTCCCATCAGATCCACAGATGCTTCCTGGAGCCATCCCTTCCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTCCCATCAGATCCACAGATGCTTCCTGGAGCCATCCCTTCCCC  900

seq1  TTCACTTCCCTCTCTTCCTGCCTAACCCATACCAGGAAGTCATGAGCACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTCCCTCTCTTCCTGCCTAACCCATACCAGGAAGTCATGAGCACC  950

seq1  ATCCTTCTGCCAGTTTCCCCAAGGCATGTGGAAATGGCAGGCCAGTGTAA  1000
      |||||||||||||||||||||  |||||||||||||||| ||||||||||
seq2  ATCCTTCTGCCAGTTTCCCCA--GCATGTGGAAATGGCA-GCCAGTGTAA  997

seq1  GTTGGGGGCCTGGGGGTGGGAAGAAGGTAGGAGAAACTTTTGTTCCTGAG  1050
      | ||||||||||||||| ||||||| ||| ||||||| ||||||||||||
seq2  G-TGGGGGCCTGGGGGT-GGAAGAA-GTA-GAGAAAC-TTTGTTCCTGAG  1042

seq1  ACTGTAAGAAAATAAATTCTTGGAGTATCCACTGGGCAGCTGAAACAAAT  1100
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  ACTGTAAGAAAAT-AATTCTTGGAGTATCCACTGGGCAGCTGGAACAAAT  1091

seq1  AGCAAGAAAACAGT-GGGGAGACGTTGGTTTCTCCCATGCTGTGGCACAT  1149
      |||||| ||| ||| ||||||| |||||||||| |||||||| ||| || 
seq2  AGCAAG-AAATAGTGGGGGAGA-GTTGGTTTCTTCCATGCTGGGGC-CA-  1137

seq1  TATTATAGTTTATAGACACCTTACCAGACATCGTGAAGACTGGTCAAGAA  1199
      |||||||| || |||  |||||| ||||| |||||  |||| ||||||  
seq2  TATTATAGGTT-TAG-GACCTTA-CAGAC-TCGTG--GACT-GTCAAG--  1178

seq1  AATGAAA  1206
      |||||||
seq2  AATGAAA  1185

seq1: chr14_45869964_45871015
seq2: B6Ng01-117O17.g_68_1113 (reverse)

seq1  ACACACACATATCTTTAAAATGAATATTTAAAAAGAAAAAATATTTAGAT  50
      ||||||| |||||||||||||| |||||| ||||||||||| ||||||||
seq2  ACACACAAATATCTTTAAAATG-ATATTT-AAAAGAAAAAAAATTTAGAT  48

seq1  TTCAACCATG-TCTCATGCACTTCGTACTTCCTTACAAGTCAGGGTTGAT  99
      |||||||||| | ||||||||||||||| |||||||||||||||||||||
seq2  TTCAACCATGTTTTCATGCACTTCGTAC-TCCTTACAAGTCAGGGTTGAT  97

seq1  AACACAGTATCTCAATTAGCTCACCGCAAGAAATTGGAAAATCAGATTTC  149
       |||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  -ACACAGTATCTCAATTAGCTCACCGCAAGAAA-TGGAAAATCAGATTTC  145

seq1  TGTTTTCTTTAGGACCCCCCAGCTTCCATAAAAAGTTACCAGTTTTACCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTTTAGGACCCCCCAGCTTCCATAAAAAGTTACCAGTTTTACCC  195

seq1  TCTGCTTGCTTTTCCACCAAGATAACTGACCTAAAGTTCCTGTATTCTAG  249
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTGC-TTTCCACCAAGATAACTGACCTAAAGTTCCTGTATTCTAG  244

seq1  GTTGTTGTCAGAATAAATTCTCACCTGCTAGATTCACAAGTTTGTCAGAA  299
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTGTTGTCAGAATAAATTCTCA-CTGCTAGATTCACAAGTTTGTCAGAA  293

seq1  ATATGACCTGAATGGTGTACAGTCTGTTTCACCTTGTAATATATATTTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACCTGAATGGTGTACAGTCTGTTTCACCTTGTAATATATATTTTG  343

seq1  CGCTCAACTCTATCTACATCAGTGTAGTTTTTAATTAAGCCTGAGTAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCAACTCTATCTACATCAGTGTAGTTTTTAATTAAGCCTGAGTAATA  393

seq1  CCCTGGAATAGTTGCCTTTTTCTGTCCTAGACTGTGACAGACACCATGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAATAGTTGCCTTTTTCTGTCCTAGACTGTGACAGACACCATGTT  443

seq1  CTGGCCTACATCAAGATATTTAAAAGAATTTTCTTAAAAAGAAGGTTTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTACATCAAGATATTTAAAAGAATTTTCTTAAAAAGAAGGTTTGT  493

seq1  TCTAGGGGCTGGTGCGGCCTCTCCTGGGCTCCTGAGTGTCATCCTCAGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGGCTGGTGCGGCCTCTCCTGGGCTCCTGAGTGTCATCCTCAGTT  543

seq1  ATGGGTCACTTTCCAGACCCAGCTCCAGGAGATCTGTGCTCTTTCTGACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCACTTTCCAGACCCAGCTCCAGGAGATCTGTGCTCTTTCTGACC  593

seq1  TCTGCAGGTAGCTACACATACATGTGGTGTATATTCATGCACGCCTACAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGGTAGCTACACATACATGTGGTGTATATTCATGCACGCCTACAC  643

seq1  ACATATGAGTAACAATAAAGAGGCTTTGTTCTGGTGAGTGCTAGATGGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGAGTAACAATAAAGAGGCTTTGTTCTGGTGAGTGCTAGATGGCT  693

seq1  CTGCCATCTTGGCTTGGTGCCGAGCCTGACAACCTGAGTTTGATCCCCAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATCTTGGCTTGGTGCCGAGCCTGACAACCTGAGTTTGATCCCCAC  743

seq1  ATCCACACGGTGGGAAGAGAGTAAACTGTGCAGTGAGTGGTGTATGTGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACACGGTGGGAAGAGAGTAAACTGTGCAGTGAGTGGTGTATGTGCT  793

seq1  TAAGAAAACACACATTAATAAGTCAATAAGTATTTGAAAACTTTTAAAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAACACACATTAATAAGTCAATAAGTATTTGAAAACTTTTAAAGT  843

seq1  CATCAGTCTGCTGTGTAATGCTGTTGATGGTGTTAACTACACAGACTCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTCTGCTGTGTAATGCTGTTGATGGTGTTAACTACACAGACTCTC  893

seq1  CAAAAAAAAAAGATTTTCTTTTTCATTTTTAACACCAAAAGGAAAAAAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAGATTTTCTTTTTCATTTTTAACACCAAAAGGAAAAAAGG  943

seq1  TCACCGATTAAAATTCTATCCTCGGGTTAGTATGTCTCCCATTCAGAAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCGATTAAAATTCTATCCTCGGGTTAGTATGTCTCCCATTCAGAAAC  993

seq1  AAACATGTGGTTAGCCCCTATCAATTTTTTAAAGTCCTTATTTTATGGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTGGTTAGCCCCTATCAATTTTTTAAAGTCCTTATTTTATGGAA  1043

seq1  TTC  1052
      |||
seq2  TTC  1046