BAC Information

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BAC

Clone NameB6Ng01-120E23
Chromosome14 (Build37)
Map Location 54,631,130 - 54,632,237
singlet/doubletsinglet
Overlap genenone
Upstream geneC920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601, LOC100043282, A130082M07Rik, LOC100042607, LOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308, LOC328483, EG667765, EG630061, LOC630086, EG436467, LOC100043322, OTTMUSG00000015124, A430107P09Rik, OTTMUSG00000015049, LOC100043325, A730076H11Rik, LOC627777
Downstream geneA630038E17Rik, EG626545, Dad1, Abhd4, Olfr49, EG666623, LOC667819, LOC100042642, 5330426L24Rik, Oxa1l, Slc7a7, Mrpl52, Mmp14, Lrp10, Rem2, Prmt5, D14Ertd500e, Jub, 4931414P19Rik, Psmb5, 5830406J20Rik, Cdh24, Acin1, LOC667711, 1700123O20Rik, LOC100042676, Cebpe, Slc7a8, LOC667893, Homez, Ppp1r3e, Bcl2l2, Pabpn1, Slc22a17, Efs, Il25, Cmtm5, Myh6, Myh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120E23.bB6Ng01-120E23.g
ACCDH924285DH924286
length1,1001,122
definitionDH924285|Mus musculus domesticus DNA, BAC clone: B6Ng01-120E23, 5' end.DH924286|Mus musculus domesticus DNA, BAC clone: B6Ng01-120E23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggggttttctctgtgcagttattccgtctggcatatttgatat
atgagctaggttttgtttgtttgtttgtttttgttttgttcttgtttgtc
aacttggcacaagttagagtagtttgagaggggagaagctcaattgagaa
aatgcctctataagtttgggctgtaggcaagcctggagggcactttctta
attcgtggttgacgtgggagggcccagtctgttgtgactgatgccaccct
tagcctggtggtcgtggatgtcgtagggaggcaggataagcaaggcacaa
gaagcaagcagtgtcccaaaccagcaggaagaagggtctctgatggcgag
gtattaagtgagaaaaccaagaatgacaaatagagaagacaagaagtcaa
gaagacaagagcaatagctgggaccacggcatcttctataaatgatgtct
tgtacaaagcatgtttattaagaagtaaaatatactctttttaggacaaa
aactggccaggtctgcagagaactatgtcagacaatgttggcaagaagaa
caaaagatccctcagacacagcggcctcaggactactaaccataacccaa
ggggaagagtacggtcctaagaaattgcaaccgtgcctcttttgaggagg
ttctgactgatagggtaccccaggtttttaggagggtgagagttactaca
gagtcacaccacagcaaggtgttgctgagatttttttttttaaagccaag
acacaaaatggctgccattgagcaggaacccaagacagcagtggttaagc
caccatggtggtttgtttatatcacgtgagcaggggcctgtgcacacaga
ggaggaaagcacagcagttgagggtggtgaaagggtggtgaactccttaa
cctagttccagagtaaacaaaggtcagtgccttagtgacttcccatttgc
ccacagtggctccaacgctagactgggccctgcagtccatttctgaatag
attcagaactaacgtccctttgtcttcatcagcgcctctgagaagtctgg
gtcagtcatgctccctacaaacctaactcttgcttggcattcacgccctt

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtgcagaaagaggaacacttctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtgctactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggaattacagagacaaagtttggagctgagataa
aaggatggaccatgtagagactgccatatccaggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttttggaaag
gacccagatgtagctgtctcttgtgagactatgccgggcctagcaaccac
agaagtggatgctcacagtcagctatggatggatcacaggctcccatgga
gggcctagagaaagtagccaggagctaagagatcttgcaaccctattagg
tgggaaccaacttatgactacagtacccggagctcttgactctcagcctg
ctatatatcaaagatggcctagttggccatacctggaaagagaggccctt
tggactgtgccacacttttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_54631130_54632237
seq2: B6Ng01-120E23.b_45_1144 (reverse)

seq1  AAGGGCGTG-ATG-CAAGCAAGAGTTATGTTTTGTAGGGAGCATGACTGA  48
      ||||||||| ||| ||||||||||||| | ||||||||||||||||||||
seq2  AAGGGCGTGAATGCCAAGCAAGAGTTA-GGTTTGTAGGGAGCATGACTGA  49

seq1  CCCAAGACTTTCTCAGAGGCGCTGATGAAAGGACAAAGGGAACCTTAGTT  98
      ||| |||| ||||||||||||||||||||  ||||||||| || ||||||
seq2  CCC-AGAC-TTCTCAGAGGCGCTGATGAA--GACAAAGGG-ACGTTAGTT  94

seq1  CTGAATCCTATTCAGAAATGGACTTGGCAGGG-CCAGTCTAGCGTTGGAG  147
      |||||| |||||||||||||||||  |||||| |||||||||||||||||
seq2  CTGAAT-CTATTCAGAAATGGACT--GCAGGGCCCAGTCTAGCGTTGGAG  141

seq1  CCACTGTTGGGCAAATGGGAAGTCACTAAGGCACTGACCTTTGTTTAACT  197
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  CCACTG-TGGGCAAATGGGAAGTCACTAAGGCACTGACCTTTGTTT-ACT  189

seq1  CTGGAACTAGGTTAAGGAGTTTCACCACCCTTTCACCACCCTCAACTGCT  247
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTGGAACTAGGTTAAGGAG-TTCACCACCCTTTCACCACCCTCAACTGCT  238

seq1  GTGCTTTCCTCCTCTGTGTGCACAGGCCCCTGCTCACCTGATATAAACAA  297
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTGCTTTCCTCCTCTGTGTGCACAGGCCCCTGCTCACGTGATATAAACAA  288

seq1  ACCACCATGGTGGCTTAACCACTGCTGTCTTGGGTTCCTGCTCAATGGCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCATGGTGGCTTAACCACTGCTGTCTTGGGTTCCTGCTCAATGGCA  338

seq1  GCCATTTTGTGTCTTGGCTTT-AAAAAAAAAATCTCAGCAACACCTTGCT  396
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCCATTTTGTGTCTTGGCTTTAAAAAAAAAAATCTCAGCAACACCTTGCT  388

seq1  GTGGTGTGACTCTGTAGTAACTCTCACCCTCCTAAAAACCTGGGGTACCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTGACTCTGTAGTAACTCTCACCCTCCTAAAAACCTGGGGTACCC  438

seq1  TATCAGTCAGAACCTCCTCAAAAGAGGCACGGTTGCAATTTCTTAGGACC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTCAGAACCTCCTCAAAAGAGGCACGGTTGCAATTTCTTAGGACC  488

seq1  GTACTCTTCCCCTTGGGTTATGGTTAGTAGTCCTGAGGCCGCTGTGTCTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTTCCCCTTGGGTTATGGTTAGTAGTCCTGAGGCCGCTGTGTCTG  538

seq1  AGGGATCTTTTGTTCTTCTTGCCAACATTGTCTGACATAGTTCTCTGCAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCTTTTGTTCTTCTTGCCAACATTGTCTGACATAGTTCTCTGCAG  588

seq1  ACCTGGCCAGTTTTTGTCCTAAAAAGAGTATATTTTACTTCTTAATAAAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCCAGTTTTTGTCCTAAAAAGAGTATATTTTACTTCTTAATAAAC  638

seq1  ATGCTTTGTACAAGACATCATTTATAGAAGATGCCGTGGTCCCAGCTATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGTACAAGACATCATTTATAGAAGATGCCGTGGTCCCAGCTATT  688

seq1  GCTCTTGTCTTCTTGACTTCTTGTCTTCTCTATTTGTCATTCTTGGTTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGTCTTCTTGACTTCTTGTCTTCTCTATTTGTCATTCTTGGTTTT  738

seq1  CTCACTTAATACCTCGCCATCAGAGACCCTTCTTCCTGCTGGTTTGGGAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTAATACCTCGCCATCAGAGACCCTTCTTCCTGCTGGTTTGGGAC  788

seq1  ACTGCTTGCTTCTTGTGCCTTGCTTATCCTGCCTCCCTACGACATCCACG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTGCTTCTTGTGCCTTGCTTATCCTGCCTCCCTACGACATCCACG  838

seq1  ACCACCAGGCTAAGGGTGGCATCAGTCACAACAGACTGGGCCCTCCCACG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAGGCTAAGGGTGGCATCAGTCACAACAGACTGGGCCCTCCCACG  888

seq1  TCAACCACGAATTAAGAAAGTGCCCTCCAGGCTTGCCTACAGCCCAAACT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCACGAATTAAGAAAGTGCCCTCCAGGCTTGCCTACAGCCCAAACT  938

seq1  TATAGAGGCATTTTCTCAATTGAGCTTCTCCCCTCTCAAACTACTCTAAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGGCATTTTCTCAATTGAGCTTCTCCCCTCTCAAACTACTCTAAC  988

seq1  TTGTGCCAAGTTGACAAACAAGAACAAAACAAAAACAAACAAACAAACAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCAAGTTGACAAACAAGAACAAAACAAAAACAAACAAACAAACAA  1038

seq1  AACCTAGCTCATATATCAAATATGCCAGACGGAATAACTGCACAGAGAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGCTCATATATCAAATATGCCAGACGGAATAACTGCACAGAGAAA  1088

seq1  ACCCCAGAATTC  1108
      ||||||||||||
seq2  ACCCCAGAATTC  1100