BAC Information

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BAC

Clone NameB6Ng01-120F22
Chromosome14 (Build37)
Map Location 110,532,335 - 110,533,505
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120F22.bB6Ng01-120F22.g
ACCDH924331DH924332
length1,1541,229
definitionDH924331|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F22, 5' end.DH924332|Mus musculus domesticus DNA, BAC clone: B6Ng01-120F22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattagtctccaattagaatgaaatttactatttttaggtcaaca
aagaatttacttaataatacacattttcaagagtaatttggcatatatct
ttacaataaatgaaattacttaagagaaaatgaaatctaaacccagttta
attagaagagattcatggaatctgggcttgaaaacacagatgcaatgcag
tgtttggtataatctgctacagtagaatttgtaaagagatctgggagtga
ttgatgcttggataagtatccttgctttgaaacatgaagacctgagtata
aattcatgaaacccaaatgaaaagctgggtttggctctgaatccctgcaa
ctgaaatgctgggcaggagcattgaaaccaggagcaccactgtgaatgac
tgacgaggccgcaaagctgaaaaacagagctgcagttcagactctgtctg
aaagcaatagagagtgcagtgaaaggtagaagaaaatgacagtgcatgtg
cagtgaaaataatcccccacacatatagcacaatgatatactataaatac
acagacacatagatacacacacacacacagagacacacacaaagagacac
acacacatacacacacacatacacatgcacacacatatacacacatacac
agacacacacacacagacacacacacacacacacacacacacaccacaga
cacacacacacacacacacacacacacacacacacacacacgtaccaaag
aaagtataaagaaaaaaactaagtggagagtgtgtttttcaattatttct
ttcttgaatgctcataattgctcagttctttcttccagtttctctctcta
aattcacccacctacatctcttgctctctttaaaactcatgggctctatt
acattcattgttattacacatgtgtacattcacatatacatgtgtgcatg
tgcactgaacaaataaataaatatatctaattactttgtataatattact
tttgtatgctgtaaaatcaatgcagtgtttttgaaaacagaaatctatcc
catcttttcaatcataacctagttcctttgctgattttgctttcgttgca
ttaagagtttccttctttttttccatttttcttgtaagtttggggtttgt
tcaa
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
ttaaatgtttctcctcatctaacgagattatcatgtggtttttgtctttg
agtttgtttatataatggattaccttgatggatttccttgtattaaacca
tccctgcatccctggaataaaacctgcttggtcaggatggatgattgctt
taatgtgttcttggattcggttagcaggaattttattgagtatttttgca
tcaatattcataagggaaattggtctgaagttcacactgaaacttataga
ggagaaagtggagaaaagccttgaagatatgggaacaggggaaaaattcc
tgaatagaacagcaatggcttgtgctgtaagattgagaattgacaaatgg
gacctcatgaaactacaaagcttctgcaaggaaaaagacaacgtcaataa
acaaaaagaccaccaacagattgggaaaggatctttacctatcctaaatc
agataggtgactaatatccaatatatataaagaactcaagaaagtggact
ccagaaaatcaaataaccccattaaaaatggggctcagaactgaacaaag
aattctcacctgaggaataccaaatggcacagaagcacctgaaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcacgtgacagca
gatgctggcaaggatgtggagaaagaggaacactcctccattgttggtgt
gattgcaagcttgtacaaccactctgggatgtcagtctggcagtttcttt
agaaaattggaccatagtactacaagaggatccaagcaataacctctctc
taggcattatatccaggaagatgcctcaaccagtaagatgacacatgctc
actatgttcatagcagtcttatttataatagccagaagctgaaagaactc
agatgcctcctctattcagagaatggaatcagaaatgtgctacaatttac
acacatggagttactacctcagctattaaagaaataattatgaatttccg
aggaaaatggatgggaactggaaggattatctccgaagtaagtattccaa
tcccaaggacttccaaaatggactctacccgtttatagtggcattatgtc
ccaataccttagatgactatcactgatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110532335_110533505
seq2: B6Ng01-120F22.b_48_1201

seq1  GAATTCATTAGTCTCCAATTAGAATGAAATTTACTATTTTTAGGTCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGTCTCCAATTAGAATGAAATTTACTATTTTTAGGTCAACA  50

seq1  AAGAATTTACTTAATAATACACATTTTCAAGAGTAATTTGGCATATATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTACTTAATAATACACATTTTCAAGAGTAATTTGGCATATATCT  100

seq1  TTACAATAAATGAAATTACTTAAGAGAAAATGAAATCTAAACCCAGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATAAATGAAATTACTTAAGAGAAAATGAAATCTAAACCCAGTTTA  150

seq1  ATTAGAAGAGATTCATGGAATCTGGGCTTGAAAACACAGATGCAATGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAGAGATTCATGGAATCTGGGCTTGAAAACACAGATGCAATGCAG  200

seq1  TGTTTGGTATAATCTGCTACAGTAGAATTTGTAAAGAGATCTGGGAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGTATAATCTGCTACAGTAGAATTTGTAAAGAGATCTGGGAGTGA  250

seq1  TTGATGCTTGGATAAGTATCCTTGCTTTGAAACATGAAGACCTGAGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCTTGGATAAGTATCCTTGCTTTGAAACATGAAGACCTGAGTATA  300

seq1  AATTCATGAAACCCAAATGAAAAGCTGGGTTTGGCTCTGAATCCCTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGAAACCCAAATGAAAAGCTGGGTTTGGCTCTGAATCCCTGCAA  350

seq1  CTGAAATGCTGGGCAGGAGCATTGAAACCAGGAGCACCACTGTGAATGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATGCTGGGCAGGAGCATTGAAACCAGGAGCACCACTGTGAATGAC  400

seq1  TGACGAGGCCGCAAAGCTGAAAAACAGAGCTGCAGTTCAGACTCTGTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGAGGCCGCAAAGCTGAAAAACAGAGCTGCAGTTCAGACTCTGTCTG  450

seq1  AAAGCAATAGAGAGTGCAGTGAAAGGTAGAAGAAAATGACAGTGCATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATAGAGAGTGCAGTGAAAGGTAGAAGAAAATGACAGTGCATGTG  500

seq1  CAGTGAAAATAATCCCCCACACATATAGCACAATGATATACTATAAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAAATAATCCCCCACACATATAGCACAATGATATACTATAAATAC  550

seq1  ACAGACACATAGATACACACACACACACAGAGACACACACAAAGAGACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACATAGATACACACACACACACAGAGACACACACAAAGAGACAC  600

seq1  ACACACATACACACACACATACACATGCACACACATATACACACATACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATACACACACACATACACATGCACACACATATACACACATACAC  650

seq1  AGACACACACACACAGACACACACACACACACACACACACACACCACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACACACACAGACACACACACACACACACACACACACACCACAGA  700

seq1  CACACACACACACACACACACACACACACACACACACACACGTACCAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACGTACCAAAG  750

seq1  AAAGTATAAAAGAAAAAAACTAAGTGGAGAGTGTGTTTTTCAATTATTTC  800
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAT-AAAGAAAAAAACTAAGTGGAGAGTGTGTTTTTCAATTATTTC  799

seq1  TTTCTTGAATGCTCATAATTGCTCAGTTCCTTTCTTCCAGTTTCTCTCTC  850
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTCTTGAATGCTCATAATTGCTCAGTT-CTTTCTTCCAGTTTCTCTCTC  848

seq1  TAAATTCACCCACCTACATCTCTTGCTCTCTTTAAAACTCATGGCCTCTA  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAAATTCACCCACCTACATCTCTTGCTCTCTTTAAAACTCATGGGCTCTA  898

seq1  TTACATTCATTGTTATTACACATGTGTACATTCACATATACATGTGTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTCATTGTTATTACACATGTGTACATTCACATATACATGTGTGCA  948

seq1  TGTGCACTG-ACAAATAAATAAATATAATCTAATTACTTTGTATAATATT  999
      ||||||||| |||||||||||||||| |||||||||||||||||||||||
seq2  TGTGCACTGAACAAATAAATAAATAT-ATCTAATTACTTTGTATAATATT  997

seq1  ACTTTTGTATGCTGTAAAATCAATGCAGTGTTTTTGAAAACAGAAATCTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTATGCTGTAAAATCAATGCAGTGTTTTTGAAAACAGAAATCTA  1047

seq1  TCCCAATCTTTCATTCATTAACCTTAATTTCTTTTGCTTGTTTTTGCTTT  1099
      |||||   ||||| ||| ||||||  | ||| ||||| || |||||||||
seq2  TCCCATCTTTTCAATCA-TAACCT--AGTTCCTTTGC-TGATTTTGCTTT  1093

seq1  TCTGTTGCATTAAGAGGTTTTCCTTCTTTTTTTTCCATTTTTTTCTTGTT  1149
         |||||||||||||  |||||||| ||||||||||  ||||||||| |
seq2  --CGTTGCATTAAGAG--TTTCCTTC-TTTTTTTCCA--TTTTTCTTG-T  1135

seq1  AAGTTTTTGGTGTTTTGTTCAA  1171
      ||||||   | | |||||||||
seq2  AAGTTT---GGGGTTTGTTCAA  1154