BAC Information

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BAC

Clone NameB6Ng01-120G15
Chromosome14 (Build37)
Map Location 35,021,531 - 35,250,111
singlet/doubletdoublet
Overlap geneSyt15, 3110001K24Rik, LOC623142, Glud1, LOC100041231, 2200001I15Rik, Sncg, Mmrn2, Bmpr1a
Upstream geneEG622657, Arhgap22, Mapk8, LOC100040079, LOC665681, Frmpd2, LOC100040093, Ptpn20, Gdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2
Downstream gene9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik, Wapal, LOC100041341, Grid1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120G15.bB6Ng01-120G15.g
ACCDH924365DH924366
length1,017823
definitionDH924365|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G15, 5' end.DH924366|Mus musculus domesticus DNA, BAC clone: B6Ng01-120G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,021,531 - 35,022,550)(35,249,289 - 35,250,111)
sequence
gaattctttggcggatccttgggaagatattcttttccctaagggtgtac
aagcactgatcatgctacaaccattttatacaaggccaacagaggagagg
ctcggggaacgccccagtctacactggagctttccgttcagggaggacca
agacctaactcttccctccatacctcaattatggaaacaagttgcattgc
ctttttatttaaaccttttggggtagatttttatcccttgtttccaaagg
gcattaaaggcacgctaatcagcagccttgggaggattgcacaggcatcc
tgaaccagacataacttcagacttgaactgtaagtcggagaccacaaaaa
gcttgctcaggagcaaaaatcagttgttctaaggaagaacatggacttga
aatagaactagaaagtcctcaggattgaatacacagagccaaaaatagtt
ccagcccttccttctaggggcttcctagtctggctttctcctgcctttgc
cccatgctgttctctcaaccagagtgcgccctctactgacagaatgtcta
ttgctttgcactttagatgtcaagccaatggcttctttctttctttcttt
ctttctttctttctttctttctttctttctttctttcttccttccttcct
tccttccttccttccttccttccttcctccctccctcccttctcactctc
tccctccctctcttccttcctttcttctctccttccttcctccctttttc
ctttcttttttttctttctttccaacataatatttctattgattctttgg
gaatttcccatcatgcatcacaatcgaaaataaaagtgaaaataaaatta
aggacaacagaaacaccatctgccaacccctctgggaaacagcctgtccc
tctgtcggctgtagccttctcccacacctgtcacagctgttggatctcaa
gctgtgcctacatggcttctgttgcactaagaaggagacagggatgctgt
gcctgcttattctgtga
gaattcatgtcatactcaacagagaatgaagaaatgaatttattgaatat
tttctatttgcatttagtttgctacgtatttggtacattccatcttgttg
ccgtgtggttcctctgtaaggcaaactgaaacggaattaggtactcagga
tcacgaagtgaggaactggcaaagctagttctttttcttttttcctcttt
aaattattaaattactttctatctgttaggaaaatttttctttcccttaa
atgaagtcattgatgtgtggctgtctagtttcccaaccactgttcaagaa
tcttttaagttatgcctgtctttgaggcattatgcttaaaagtgtcttca
tcttccttcctcacttagaaggtatgaactcacatgactgtctgcatagc
tgtagagcattagtggccattgcctggtgcatagtctgcttttattctta
tagtcatctctggtagagaagacagatgagagaaattgagaattgggtct
tcatctttcatatctgctattaagtgggcagtaatccatggtttagagat
ctttcacccaagactgccaaagatatccatctttgttttcctgtcacatt
aatgtactcaaggcgatcttcgttcagccttcctgggaacgactgcttgg
gcacctcatttattcatcgtcagttatgcaatcattcttctatgctgatt
gtctctaggtggattatttcagagtttgcaacaaaaaccctatcatatct
ctgtctttgtgataatttcaaaggaattattttaaaatatactcagttta
aatgtagattttagctgggcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_35021531_35022550
seq2: B6Ng01-120G15.b_43_1059

seq1  GAATTCTTTGGCGGATCCTTGGGAAGATACTCTTTTCCCTAAGGGTGTAC  50
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAATTCTTTGGCGGATCCTTGGGAAGATATTCTTTTCCCTAAGGGTGTAC  50

seq1  AAGCACTGATCATGCTACAACCATTTTATACAAGGCCAACAGAGGAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTGATCATGCTACAACCATTTTATACAAGGCCAACAGAGGAGAGG  100

seq1  CTCGGGGAACGCCCCAGTCTACACTGGAGCTTTCCGTTCAGGGAGGACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGGAACGCCCCAGTCTACACTGGAGCTTTCCGTTCAGGGAGGACCA  150

seq1  AGACCTAACTCTTCCCTCCATACCTCAATTATGGAAACAAGTTGCATTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTAACTCTTCCCTCCATACCTCAATTATGGAAACAAGTTGCATTGC  200

seq1  CTTTTTATTTAAACCTTTTGGGGTAGATTTTTATCCCTTGTTTCCAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATTTAAACCTTTTGGGGTAGATTTTTATCCCTTGTTTCCAAAGG  250

seq1  GCATTAAAGGCACGCTAATCAGCAGCCTTGGGAGGATTGCACAGGCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAAAGGCACGCTAATCAGCAGCCTTGGGAGGATTGCACAGGCATCC  300

seq1  TGAACCAGACATAACTTCAGACTTGAACTGTAAGTCGGAGACCACAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAGACATAACTTCAGACTTGAACTGTAAGTCGGAGACCACAAAAA  350

seq1  GCTTGCTCAGGAGCAAAAATCAGTTGTTCTAAGGAAGAACATGGACTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCAGGAGCAAAAATCAGTTGTTCTAAGGAAGAACATGGACTTGA  400

seq1  AATAGAACTAGAAAGTCCTCAGGATTGAATACACAGAGCCAAAAATAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAACTAGAAAGTCCTCAGGATTGAATACACAGAGCCAAAAATAGTT  450

seq1  CCAGCCCTTCCTTCTAGGGGCTTCCTAGTCTGGCTTTCTCCTGCCTTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCTTCCTTCTAGGGGCTTCCTAGTCTGGCTTTCTCCTGCCTTTGC  500

seq1  CCCATGCTGTTCTCTCAACCAGAGTGCGCCCTCTACTGACAGAATGTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCTGTTCTCTCAACCAGAGTGCGCCCTCTACTGACAGAATGTCTA  550

seq1  TTGCTTTGCACTTTAGATGTCAAGCCAATGGCTTCTTTCTTTCTTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGCACTTTAGATGTCAAGCCAATGGCTTCTTTCTTTCTTTCTTT  600

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCT  650

seq1  TCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTTCTCTCTCTC  700
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCCTTCCTTCCTTCCTTCCTTCCTTCCTCCCTCCCTCCCTTCTCACTCTC  700

seq1  TCCCTCCCTCTCTTCCTTCCTTTCTTCTCTCCTTCCTTCCTCCCTTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCTCTCTTCCTTCCTTTCTTCTCTCCTTCCTTCCTCCCTTTTTC  750

seq1  CTTTCTTTTTTTTCTTTTCTTTCCAACATAATATTTCTATTGATTCTTTG  800
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTTTTTC-TTTCTTTCCAACATAATATTTCTATTGATTCTTTG  799

seq1  GGAATTTCCCATCATGCATCACAATCGAAAATAAAAGTGAAAATAAAAAT  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGAATTTCCCATCATGCATCACAATCGAAAATAAAAGTGAAAAT-AAAAT  848

seq1  TAAGGACAACAGAAACACCATCTGCCAACCCCTCTGGGAAACAGCCTGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACAACAGAAACACCATCTGCCAACCCCTCTGGGAAACAGCCTGTC  898

seq1  CCTCTGTCGGCTGTAGCCTTCTCCCACACCTGTCACAGCTGTTGAGTCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  CCTCTGTCGGCTGTAGCCTTCTCCCACACCTGTCACAGCTGTTGGATCTC  948

seq1  AAGCTGTGCCTTACATGGCTTCTGTTGCACTAAGAAGGAGACAAGGATGC  1000
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  AAGCTGTGCC-TACATGGCTTCTGTTGCACTAAGAAGGAGACAGGGATGC  997

seq1  TGTGCCTGCTTATTCTGTGA  1020
      ||||||||||||||||||||
seq2  TGTGCCTGCTTATTCTGTGA  1017

seq1: chr14_35249289_35250111
seq2: B6Ng01-120G15.g_67_889 (reverse)

seq1  CACGCCCAGCTAAATTCTACATTTTAACTGAGTATATTTTTAAAATAATT  50
      |||||||||||||| ||||||||| ||||||||||| |||||||||||||
seq2  CACGCCCAGCTAAAATCTACATTTAAACTGAGTATA-TTTTAAAATAATT  49

seq1  CCTTTGAAATTATCACAAAGACAGAGATATGATAGGGTTTTTGTTGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAAATTATCACAAAGACAGAGATATGATAGGGTTTTTGTTGCAAA  99

seq1  CTCTGAAATAATCCACCTAGAGACAATCAGCATAGAAGAATGATTGCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAATAATCCACCTAGAGACAATCAGCATAGAAGAATGATTGCATA  149

seq1  ACTGACGATGAATAAATGAGGTG-CCAAGCAGTCGTTCCCAGGAAGGCTG  199
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ACTGACGATGAATAAATGAGGTGCCCAAGCAGTCGTTCCCAGGAAGGCTG  199

seq1  AACGAAGATCGCCTTGAGTACATTAATGTGACAGGAAAACAAAGATGGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAAGATCGCCTTGAGTACATTAATGTGACAGGAAAACAAAGATGGAT  249

seq1  ATCTTTGGCAGTCTTGGGTGAAAGATCTCTAAACCATGGATTACTGCCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGGCAGTCTTGGGTGAAAGATCTCTAAACCATGGATTACTGCCCA  299

seq1  CTTAATAGCAGATATGAAAGATGAAGACCCAATTCTCAATTTCTCTCATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATAGCAGATATGAAAGATGAAGACCCAATTCTCAATTTCTCTCATC  349

seq1  TGTCTTCTCTACCAGAGATGACTATAAGAATAAAAGCAGACTATGCACCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTCTACCAGAGATGACTATAAGAATAAAAGCAGACTATGCACCA  399

seq1  GGCAATGGCCACTAATGCTCTACAGCTATGCAGACAGTCATGTGAGTTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATGGCCACTAATGCTCTACAGCTATGCAGACAGTCATGTGAGTTCA  449

seq1  TACCTTCTAAGTGAGGAAGGAAGATGAAGACACTTTTAAGCATAATGCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCTAAGTGAGGAAGGAAGATGAAGACACTTTTAAGCATAATGCCT  499

seq1  CAAAGACAGGCATAACTTAAAAGATTCTTGAACAGTGGTTGGGAAACTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACAGGCATAACTTAAAAGATTCTTGAACAGTGGTTGGGAAACTAG  549

seq1  ACAGCCACACATCAATGACTTCATTTAAGGGAAAGAAAAATTTTCCTAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCACACATCAATGACTTCATTTAAGGGAAAGAAAAATTTTCCTAAC  599

seq1  AGATAGAAAGTAATTTAATAATTTAAAGAGGAAAAAAGAAAAAGAACTAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAAGTAATTTAATAATTTAAAGAGGAAAAAAGAAAAAGAACTAG  649

seq1  CTTTGCCAGTTCCTCACTTCGTGATCCTGAGTACCTAATTCCGTTTCAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCAGTTCCTCACTTCGTGATCCTGAGTACCTAATTCCGTTTCAGT  699

seq1  TTGCCTTACAGAGGAACCACACGGCAACAAGATGGAATGTACCAAATACG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTACAGAGGAACCACACGGCAACAAGATGGAATGTACCAAATACG  749

seq1  TAGCAAACTAAATGCAAATAGAAAATATTCAATAAATTCATTTCTTCATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAACTAAATGCAAATAGAAAATATTCAATAAATTCATTTCTTCATT  799

seq1  CTCTGTTGAGTATGACATGAATTC  823
      ||||||||||||||||||||||||
seq2  CTCTGTTGAGTATGACATGAATTC  823