BAC Information

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BAC

Clone NameB6Ng01-120K16
Chromosome14 (Build37)
Map Location 6,601,641 - 6,766,174
singlet/doubletdoublet
Overlap geneLOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804
Upstream geneLOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637, EG622640, LOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438
Downstream geneLOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120K16.bB6Ng01-120K16.g
ACCDH924553DH924554
length1,1701,146
definitionDH924553|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K16, 5' end.DH924554|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(6,601,641 - 6,602,351)(6,765,038 - 6,766,174)
sequence
gaattccttgatccacttagatatgaccttagtacaaggagataggaatg
gatcaattcccattcttctacatgttacccgccagtagtgccagcaccat
tttttgaaaatgctgccttttctccactggatggttttagctcccttgtc
aaggatcaaatgaccataggtgtgtgggttcatttctgtgtattcaattc
tattccattggtctacttgtctatcgttataccaagaccatgcaattttg
gatcacaattgctctgtagtacagctttaggtcaggctaccaacaacaat
ttaaaaaaaaaaaccttctgagggctggaattacaagcttgtaccaaatc
tggtcaacttttgtatgtatttccaccagaggttcttttatcctggagaa
cagtttttgctatcctaggttttttgtaattccagatgaatttgcagatt
gccctttctaattcattgaagaattgagttggaattttgatgaagattgc
attgaatctgtagattgcatttgacaagatagccatttttactatattga
tcctgctaatccatgagcatagaagacctttccatcttctgagatcttct
ttaatatctttcttcagagacttgaagttcatatcatacagatcttttac
ttccttagttagagtaacacgaaggtattttctattggtttttactcttg
tgaacagtgttgtttccgtaagttctttctcagcccatttcaaaagacca
agtcagaatcagtgtcaatctctttctccctccagatcaggatgttagta
agctcttagctgttgctctagcactaggcctgcctgtctgggggccatac
ttccaaacatgatgacatggactctatgaaactctaagcaagccctcaga
taaaagcttcattgtatgttaccttgtttatagtatttcatcacagcaat
agaacagtgactaccacaggcagtaaagaatttctcccagcttacagtta
tagaccatcatgaactgaagtcagtgcaggacgccatggtggagccctgc
ttacaagctgctcctcatggcttcttcagctgctttcttatacccaggac
tactgcaaggcaatccactcttgcaggggcttagccttacactatcaatc
ttaatcaagaaaatgtccca
gaattctccagctttggaaggagaggttgccaaaggggatcccacgggtc
catgagaggctccaagagaggcaccccagaaaaggaccaagttggggaga
actagttagcaggtaggtcatggcagttgctagtgatatcatcagtaatg
ccttccttggagaatctcttgtatctaggatagaactagaatcttctgtg
ttgtcacctgtgttgtggtgacagcaactgcctgtggttcataccttctg
tttgctctgggatcaccagcaggaatgttttcctggctgctcaggctatt
tcagaaagagaatggcgatgaaggagagaccagaccaacggagaaggaag
agggaatcctttctcatgaaaaaggaagaaggaagtcattcttgagaagg
cacagtgagtcctgggcagagttgggatcttcctggtagaggtaggcttg
agctgggccgtccaggagtaggtcttacaagctgaagccttggactttgc
caatgtcaaagagtcaagaatttctgatgattagtttgacagagccagga
attgacaaacctgtagctacttttctgggagctattttaatttcaatttg
agtggcaaagaatgccaggagggcattctatgggaatatcagtgtgttat
tccttttcatggaagggagttgaagcacttcaccttccagattactgtag
gtaacttgagtatctgatgaaaagaacagagaaggatgctcccctggtca
tgtcatgtggtgaggactcagacacattggatttgaagacacactattta
ttagtgcttgaaagtgctaagcactattgaaatccaggatttccctgcaa
cacatctgatatgaccttgaacatgttccccattatctttacgtctgagg
caaatttatagatttcatgggcaaggggtctgtatagggagtgtggcata
ttgtctgacaattggttgttagaagaagactatactaaccaaacagcttg
agattagcttttctgcttctttaagggattccaccttgctttaacctttt
ctcttccctcagtcttctctcttgggactcctggataggtctcccttgcc
gtgtcctccagtatcaactcatttgggtttatatctatctgcaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_6601641_6602351
seq2: B6Ng01-120K16.b_513_1214

seq1  AAGAATTGAGTTGGAATTTTGATGAAGATTGCATTGAATCTGTAGATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGAGTTGGAATTTTGATGAAGATTGCATTGAATCTGTAGATTGC  50

seq1  ATTTGACAAGATAGCCATTTTTACTATATTGATCCTGCTAATCCATGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACAAGATAGCCATTTTTACTATATTGATCCTGCTAATCCATGAGC  100

seq1  ATAGAAGACCTTTCCATCTTCTGAGATCTTCTTTAATATCTTTCTTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGACCTTTCCATCTTCTGAGATCTTCTTTAATATCTTTCTTCAGA  150

seq1  GACTTGAAGTTCATATCATACAGATCTTTTACTTCCTTAGTTAGAGTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAAGTTCATATCATACAGATCTTTTACTTCCTTAGTTAGAGTAAC  200

seq1  ACGAAGGTATTTTCTATTGGTTTTTACTCTTGTGAACAGTGTTGTTTCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGGTATTTTCTATTGGTTTTTACTCTTGTGAACAGTGTTGTTTCCG  250

seq1  TAAGTTCTTTCTCAGCCCATTTCAAAAGACCAAGTCAGAATCAGTGTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCTTTCTCAGCCCATTTCAAAAGACCAAGTCAGAATCAGTGTCAA  300

seq1  TCTCTTTCTCCCTCCAGATCAGGATGTTAGTAAGCTCTTAGCTGTTGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTCCCTCCAGATCAGGATGTTAGTAAGCTCTTAGCTGTTGCTC  350

seq1  TAGCACTAGGCCTGCCTGTCTGGGGGCCATACTTCCAAACATGATGACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAGCACTAGGCCTGCCTGTCTGGGGGCCATACTTCCAAACATGATGA-CA  399

seq1  TGGACTCTATGAAACTCTAAGCAAGCCCTCAGATAAAAGCTTCATTGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCTATGAAACTCTAAGCAAGCCCTCAGATAAAAGCTTCATTGTAT  449

seq1  GTTACCTTGTTTATAGTATTTCATCACAGCAATAGAACAGTGACTACCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTTGTTTATAGTATTTCATCACAGCAATAGAACAGTGACTACCAC  499

seq1  AGGCAGTAAAGAATTTCTCCCAGCTTACAGTTATAGACCATCATGAACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTAAAGAATTTCTCCCAGCTTACAGTTATAGACCATCATGAACTG  549

seq1  AAGTCAGTGCAGGACGCCATGGTGGAGCCCTGCTTACAAGCTTGCTCCTC  600
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGTCAGTGCAGGACGCCATGGTGGAGCCCTGCTTACAAGC-TGCTCCTC  598

seq1  ATGGCTTCTTCAGCCTGCTTTCTTATACCACAGGACCACCTGCCAAGGCA  650
      ||||||||||||| ||||||||||||||| |||||| | ||| |||||||
seq2  ATGGCTTCTTCAG-CTGCTTTCTTATACC-CAGGACTA-CTG-CAAGGCA  644

seq1  ATCCACTTCTTGCAGTGGGCTTAGCCCTACCACATCAATCCTTAATCAAG  700
      |||||| |||||||| |||||||||| |||   |||||| ||||||||||
seq2  ATCCAC-TCTTGCAG-GGGCTTAGCCTTACACTATCAAT-CTTAATCAAG  691

seq1  AAAATGCCCCA  711
      |||||| ||||
seq2  AAAATGTCCCA  702

seq1: chr14_6765038_6766174
seq2: B6Ng01-120K16.g_69_1214 (reverse)

seq1  CCCTGCAGATAG--ATAAACACAAATGAGTTTGCATACTTGATGGCCCAG  48
      ||||||||||||  |||||| ||||||||||   ||||| ||  |  || 
seq2  CCCTGCAGATAGATATAAACCCAAATGAGTT--GATACTGGA--GGACAC  46

seq1  GGCAGGGGAGACC-ATTCA-GAGTCCCAAG-GAGAAGACTGAGGG-AGAG  94
      |||| |||||||| || || |||||||||| |||||||||||||| ||||
seq2  GGCAAGGGAGACCTATCCAGGAGTCCCAAGAGAGAAGACTGAGGGAAGAG  96

seq1  AAAAGG-TAAAGACAGGGTGAATCCCTAAAAG-AGCAGAAAAGCTATCTT  142
      |||||| |||||  |||  |||||||| |||| |||||||||||||   |
seq2  AAAAGGTTAAAGCAAGGTGGAATCCCTTAAAGAAGCAGAAAAGCTAATCT  146

seq1  CCAGCTGGTTTGCTAAGCTAT-GTCCTCTTCCTAACCACC-ATTGTCAGA  190
      | |||| ||||| | || ||| ||| |||| ||||| ||| |||||||||
seq2  CAAGCT-GTTTGGTTAG-TATAGTCTTCTT-CTAACAACCAATTGTCAGA  193

seq1  C-ATATGCCACACTCCCTATTACAGGACCCCTTGCCC-TGAAATCTAT-A  237
      | ||||||||||||||||| |||| |||||||||||| |||||||||| |
seq2  CAATATGCCACACTCCCTA-TACA-GACCCCTTGCCCATGAAATCTATAA  241

seq1  ATTTGCCTCAGACGTAAAGAT-ATGGGGAACATTGTC-AGGTCATATCAG  285
      ||||||||||||||||||||| |||||||||||  || ||||||||||||
seq2  ATTTGCCTCAGACGTAAAGATAATGGGGAACATGTTCAAGGTCATATCAG  291

seq1  ATGTGTTGCAGGGAAATCCTGGATTTC-ATAGTGCTTAGCACTATCAAGC  334
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  ATGTGTTGCAGGGAAATCCTGGATTTCAATAGTGCTTAGCACTTTCAAGC  341

seq1  ACTAATTAATAGTGTGTCTTCAAATCCAATGTGTCTGAGTCCTCACCACA  384
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAAATAGTGTGTCTTCAAATCCAATGTGTCTGAGTCCTCACCACA  391

seq1  TGACATGACCAGGGGAGCATCCTTCTCTGTTCTTTTCATCAGATACTCAA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGACCAGGGGAGCATCCTTCTCTGTTCTTTTCATCAGATACTCAA  441

seq1  GTTACCTACAGTAATCTGGAAGGTGAAGTGCTTCAACTCCCTTCCATG-A  483
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTTACCTACAGTAATCTGGAAGGTGAAGTGCTTCAACTCCCTTCCATGAA  491

seq1  AAGGAATAACACACTGATATTCCCATAGAATGCCCTCCTGGCATTCTTTG  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATAACACACTGATATTCCCATAGAATGCCCTCCTGGCATTCTTTG  541

seq1  CCACTCAAATTGAAATT-AAATAGCTCCCAGAAAAGTAGCTACAGGTTTG  582
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCACTCAAATTGAAATTAAAATAGCTCCCAGAAAAGTAGCTACAGGTTTG  591

seq1  TCAATTCCTGGCTCTGTCAAACTAATCATCAGAAATTCTTGACTCTTTGA  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCCTGGCTCTGTCAAACTAATCATCAGAAATTCTTGACTCTTTGA  641

seq1  CATTGGCAAAGTCCAAGGCTTCAGCTTGTAAGACCTACTCCTGGACGGCC  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCAAAGTCCAAGGCTTCAGCTTGTAAGACCTACTCCTGGACGGCC  691

seq1  CAGCTCAAGCCTACCTCTACCAGGAAGATCCCAACTCTGCCCAGGACTCA  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCAAGCCTACCTCTACCAGGAAGATCCCAACTCTGCCCAGGACTCA  741

seq1  CTGTGCCTTCTCAAGAATGACTTCCTTCTTCCTTTTTCATGAGAAAGGAT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCTTCTCAAGAATGACTTCCTTCTTCCTTTTTCATGAGAAAGGAT  791

seq1  TCCCTCTTCCTTCTCCGTTGGTCTGGTCTCTCCTTCATCGCCATTCTCTT  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTCCTTCTCCGTTGGTCTGGTCTCTCCTTCATCGCCATTCTCTT  841

seq1  TCTGAAATAGCCTGAGCAGCCAGGAAAACATTCCTGCTGGTGATCCCAGA  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATAGCCTGAGCAGCCAGGAAAACATTCCTGCTGGTGATCCCAGA  891

seq1  GCAAACAGAAGGTATGACCCACAGGCAGTTGCTGTCACCACAACACAGGT  932
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCAAACAGAAGGTATGAACCACAGGCAGTTGCTGTCACCACAACACAGGT  941

seq1  GACAACACAGAAGATTCTAGTTCTATCCTAGATACAAGAGATTCTCCAAG  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACACAGAAGATTCTAGTTCTATCCTAGATACAAGAGATTCTCCAAG  991

seq1  GAAGGCATTACTGATGATATCACTAGCAACTGCCATGACCTACCTGCTAA  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCATTACTGATGATATCACTAGCAACTGCCATGACCTACCTGCTAA  1041

seq1  CTAGTTCTCCCCAACTTGGTCCTTTTCTGGGGTGCCTCTCTTGGAGCCTC  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCTCCCCAACTTGGTCCTTTTCTGGGGTGCCTCTCTTGGAGCCTC  1091

seq1  TCATGGACCCGTGGGATCCCCTTTGGCAACCTCTCCTTCCAAAGCTGGAG  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGACCCGTGGGATCCCCTTTGGCAACCTCTCCTTCCAAAGCTGGAG  1141

seq1  AATTC  1137
      |||||
seq2  AATTC  1146