BAC Information

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BAC

Clone NameB6Ng01-120N08
Chromosome14 (Build37)
Map Location 72,194,923 - 72,196,054
singlet/doubletsinglet
Overlap genenone
Upstream geneGfra2, LOC100043132, LOC100043136
Downstream geneLOC668477, LOC668482, LOC675957, Fndc3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120N08.bB6Ng01-120N08.g
ACCDH924672DH924673
length1,132748
definitionDH924672|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N08, 5' end.DH924673|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgactctgaaacatgaggctattgaaattatctaggtttcaca
gaagaaccaaaattttaggaactttaaaacatcttacttaataagtacag
agaaggttccattggcaaagagcttgcaatatattcatgaggacctgagt
tcagatctgtagcatgcatgtaaggctatgctctgtattgtgcatctgta
accccaacactagggtagggtatgcagagacaggcagaccttagaggctc
actgagtggctagtccaacagaatcagtgagcctcaggtttattgagaga
ccctgagttgaaaagtaagatggagagtgatagaagaagacatctgacaa
taacctctgacctctgtgcatgcaaccatggttttgacacaatgcagtca
aaaccagaagcaaaagtgtattatactcagtcatatgctggtagacatat
ctaaagacaaccagaatacagcagagaaaccaaatggaagagaagaaaaa
tacattgacatggagggcagatcaaggaagttcagcgggcagagtgagca
tcctagcagatgagataagaaagaattatagataattaagatcctggttg
acagaacagcccggttctgaaggtggctgctggggtgagcatgataccaa
tgctggtacctgatacagatctgcttggtgacagaaaacaacaaggaaga
ggaaatgagtcagagcacattcagagacagaaaggctgaggaagcccatg
tccctagggtgtggcaaggaacagtgttagccacattctagcatgtgtga
tcgaagtttagtacactcctttgggcccttgcatttagaggtgggtagag
gtcaggggtttgaccactatactgcctttgtgcggttgtctgggtttggt
tttcctggggtgatgggacaccctaagacaggaaatcacatgatccactc
tgggctcaggaagaccatgtgcctaagtaactgtgatttttttttttaga
aaatcaatagaggttgcctgtgtggatcctttactcttgccaggctatgg
tgtggctggcatggggcttggataggttagtcatatggtactttcttaga
catcattcagtctcccagcttcttctaacaac

gaattcatgaaattcttaggcaaatggatggaactagaaaatatcttcct
gaacgaggtaacccaatcaaaaaaagaacatacatggtatgcactcattg
ataagttgttattagccaagaagctcagaatactcaaggtacaattcatg
gaccaaatgaaactcaagaagaaggaagaccaaagtgtggatagatactt
tgatccttattagaagggggaacaaaacacccatggtagaagttacagag
acaaaatgtggagtatctggaaggaatgaccatccatatattgtcctacc
tggggattcatcccatatatagtcaccaaacccagacactattgtggatg
ccaacaagagcttgctgacaggagcctgatatagctgcctcctgagagac
tctaccagtaccttacaaatacagaggtggatgcttgcagccaaccattg
cgctcaccatagggtccccaatgaaggagctaccgaaaggccccaaggag
ctgaggggtttgcagtcctataggaggaacaacaatatgaacaaactagt
agccccagagctccctgggattagaccaccaactaaagagtacaaatggt
gggactcatggctccagcttcatatgtagcagaggttggccttgctatgt
tatcaatgggaggggagacccttggtcttgtgagggctctatgccccagt
gtaggggaatgccagggccaggaaatgggagtgggtggggtggtgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_72194923_72196054
seq2: B6Ng01-120N08.b_48_1179

seq1  GAATTCTTGACTCTGAAACATGAGGCTATTGAAATTATCTAGGTTTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACTCTGAAACATGAGGCTATTGAAATTATCTAGGTTTCACA  50

seq1  GAAGAACCAAAATTTTAGGAACTTTAAAACATCTTACTTAATAAGTACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACCAAAATTTTAGGAACTTTAAAACATCTTACTTAATAAGTACAG  100

seq1  AGAAGGTTCCATTGGCAAAGAGCTTGCAATATATTCATGAGGACCTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTTCCATTGGCAAAGAGCTTGCAATATATTCATGAGGACCTGAGT  150

seq1  TCAGATCTGTAGCATGCATGTAAGGCTATGCTCTGTATTGTGCATCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCTGTAGCATGCATGTAAGGCTATGCTCTGTATTGTGCATCTGTA  200

seq1  ACCCCAACACTAGGGTAGGGTATGCAGAGACAGGCAGACCTTAGAGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAACACTAGGGTAGGGTATGCAGAGACAGGCAGACCTTAGAGGCTC  250

seq1  ACTGAGTGGCTAGTCCAACAGAATCAGTGAGCCTCAGGTTTATTGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTGGCTAGTCCAACAGAATCAGTGAGCCTCAGGTTTATTGAGAGA  300

seq1  CCCTGAGTTGAAAAGTAAGATGGAGAGTGATAGAAGAAGACATCTGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGTTGAAAAGTAAGATGGAGAGTGATAGAAGAAGACATCTGACAA  350

seq1  TAACCTCTGACCTCTGTGCATGCAACCATGGTTTTGACACAATGCAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCTGACCTCTGTGCATGCAACCATGGTTTTGACACAATGCAGTCA  400

seq1  AAACCAGAAGCAAAAGTGTATTATACTCAGTCATATGCTGGTAGACATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAAGCAAAAGTGTATTATACTCAGTCATATGCTGGTAGACATAT  450

seq1  CTAAAGACAACCAGAATACAGCAGAGAAACCAAATGGAAGAGAAGAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGACAACCAGAATACAGCAGAGAAACCAAATGGAAGAGAAGAAAAA  500

seq1  TACATTGACATGGAGGGCAGATCAAGGAAGTTCAGCGGGCAGAGTGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGACATGGAGGGCAGATCAAGGAAGTTCAGCGGGCAGAGTGAGCA  550

seq1  TCCTAGCAGATGAGATAAGAAAGAATTATAGATAATTAAGATCCTGGTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCAGATGAGATAAGAAAGAATTATAGATAATTAAGATCCTGGTTG  600

seq1  ACAGAACAGCCCGGTTCTGAAGGTGGCTGCTGGGGTGAGCATGATACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACAGCCCGGTTCTGAAGGTGGCTGCTGGGGTGAGCATGATACCAA  650

seq1  TGCTGGTACCTGATACAGATCTGCTTGGTGACAGAAAACAACAAGGAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTACCTGATACAGATCTGCTTGGTGACAGAAAACAACAAGGAAGA  700

seq1  GGAAATGAGTCAGAGCACATTCAGAGACAGAAAGGCTGAGGAAGCCCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGAGTCAGAGCACATTCAGAGACAGAAAGGCTGAGGAAGCCCATG  750

seq1  TCCCTAGGGTGTGGCAAGGAACAGTGTTAGCCACATTCTAGCATGTGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGGGTGTGGCAAGGAACAGTGTTAGCCACATTCTAGCATGTGTGA  800

seq1  TCGAAGTTTAGTACACTCCTTTGGGCCCTTGCATTTAGAGGTGGGTAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAGTTTAGTACACTCCTTTGGGCCCTTGCATTTAGAGGTGGGTAGAG  850

seq1  GTCAGGGGTTTGACCACTATACTGCC-TTGTGCGGTTGTCTGGGTTTGG-  898
      |||||||||||||||||||||||||| |||||||||||||||||||||| 
seq2  GTCAGGGGTTTGACCACTATACTGCCTTTGTGCGGTTGTCTGGGTTTGGT  900

seq1  TATCCT-GGGTGAT-GGACACCCTTAAGACAGGAAATCACATGATCCACT  946
      | |||| ||||||| |||||||| ||||||||||||||||||||||||||
seq2  TTTCCTGGGGTGATGGGACACCC-TAAGACAGGAAATCACATGATCCACT  949

seq1  CTGGGCTCAGGAAGACCATGTGCCTAAGT-ACTGTGATTTTTTTTTTAAG  995
      ||||||||||||||||||||||||||||| ||||||||||||||||| ||
seq2  CTGGGCTCAGGAAGACCATGTGCCTAAGTAACTGTGATTTTTTTTTTTAG  999

seq1  AAAATCAATAGAGGCTGCCTGTGTGATTCCTTTACTCTTGCAAGGCTATG  1045
      |||||||||||||| ||||||||||  |||||||||||||| ||||||||
seq2  AAAATCAATAGAGGTTGCCTGTGTGGATCCTTTACTCTTGCCAGGCTATG  1049

seq1  GTGTGGCTGCACTGTGGCTTTGGATAGTTTTAGTCATAAGGAACTTCCTA  1095
      |||||||||   || ||| ||||||||  ||||||||| || |||| || 
seq2  GTGTGGCTGGCATGGGGC-TTGGATAG-GTTAGTCATATGGTACTTTCTT  1097

seq1  AGACATCATTCAGTTCTCCCCAGCTTCTTCTAACAAC  1132
      ||||||||||||| ||| |||||||||||||||||||
seq2  AGACATCATTCAG-TCT-CCCAGCTTCTTCTAACAAC  1132


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