BAC Information

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BAC

Clone NameB6Ng01-120N13
Chromosome14 (Build37)
Map Location 105,193,346 - 105,341,884
singlet/doubletdoublet
Overlap genenone
Upstream geneEdnrb, Pou4f1, 2610206B13Rik, D130009I18Rik
Downstream geneLOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120N13.bB6Ng01-120N13.g
ACCDH924682DH924683
length2351,099
definitionDH924682|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N13, 5' end.DH924683|Mus musculus domesticus DNA, BAC clone: B6Ng01-120N13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,193,346 - 105,193,580)(105,340,764 - 105,341,884)
sequence
agaaagataaacattaagaaaatgaaccgctcattttaaaaatggccatc
atccggaatacagatgccaagcgctgctggtatgcatagagcaaaggaat
tcatgtgtgtagcttggaggacaagcagtgcaaaggtttcttgaaacctg
gaaagataacggtcgtatggcccagccaacccatccaaagcatatactca
gggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctttggatctatttttgataaacattgttttagctgaattgtaaa
gtcatggaagtcctttagctttgaaaagcgtccaacttctttttaaatta
aaatatcaggtttttatacaatgtattctgatttgggtttttcttcccct
agccctctccctgtcttacccacccacccaaatccacacagtttctttct
cattagaatacaaacaggcatctaaaatagtaggaacaataataacaaca
gtaattaataaataataagaataaaagcaaccaaatcagaataggacaga
acaaacagaagaagaaaaggacactccccaataaagtctaagaaacgcat
atagatgcagagttacatgttttcatatagagaaaccccataaaaacata
aaaccaaaaccacgatatatatgcaaaggacctttaaggtggaaaacaaa
acaaaaccctgacaaaacattacgagacaaggaacttccaaaaatggtgt
tgagttccttttgttttggttgtctacagatgggcatggggcctgccctt
aagaatagtttgtattccctgtgagattgttggagaaaactaattttcca
tttgcaagtggttaataatggtctccaacttcttactcccatctcagggc
ctcattcttatttacagtatattcacaatgccaactcaagtgaagagacc
ttgaaatatgcccactttgtgtgttcacttaaatacacacatgaatggct
gcactgtagactcagatagaggctttctttgtgattatgagaagttgctc
ataaattgtttttacgtgtgtccattggatgcatgcatgtagaatccaaa
agacatctttcagggctgggttttcttactatggattctagattctgggt
tttcaaggcaaactccttgatcttatgcaacaagtctctgctcttagatt
aaacttcttgagtcccattagagctacatttgtttcatctatttttacac
ttatacatcttttagtaggaaatattataataaactttccgtttaaatct
tgctagatacttcagtaggttggatgatttatttctctgactaaaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_105193346_105193580
seq2: B6Ng01-120N13.b_53_287

seq1  AGAAAGATAAACATTAAGAAAATGAACCGCTCATTTTAAAAATGGCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATAAACATTAAGAAAATGAACCGCTCATTTTAAAAATGGCCATC  50

seq1  ATCCGGAATACAGATGCCAAGCGCTGCTGGTATGCATAGAGCAAAGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGGAATACAGATGCCAAGCGCTGCTGGTATGCATAGAGCAAAGGAAT  100

seq1  TCATGTGTGTAGCTTGGAGGACAAGCAGTGCAAAGGTTTCTTGAAACCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTGTAGCTTGGAGGACAAGCAGTGCAAAGGTTTCTTGAAACCTG  150

seq1  GAAAGATAACGGTCGTATGGCCCAGCCAACCCATCCAAAGCATATACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATAACGGTCGTATGGCCCAGCCAACCCATCCAAAGCATATACTCA  200

seq1  GGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  235
      |||||||||||||||||||||||||||||||||||
seq2  GGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  235

seq1: chr14_105340764_105341884
seq2: B6Ng01-120N13.g_68_1166 (reverse)

seq1  ATTTTTTAAGTCAAGAAGAAAATAAAATCATACAAACCTAACTGAAGTAT  50
      ||||||| ||||    ||| ||  ||||||| | ||||| ||||||||||
seq2  ATTTTTT-AGTC----AGAGAAATAAATCAT-CCAACCT-ACTGAAGTAT  43

seq1  CTAAGCAAGAATTTTTTAAAAAGGGAAAGTTTTTATTTATTATATTTTCT  100
      || ||||||| ||      ||| |||||||||    |||| |||||| ||
seq2  CT-AGCAAGATTT------AAACGGAAAGTTT---ATTATAATATTTCCT  83

seq1  ACTAAAAGGATGTAATAAGTGTATAAAATAGATGAAACAAAATGTAGCTC  150
      ||||||| ||||| ||||||||| |||||||||||||| |||||||||||
seq2  ACTAAAA-GATGT-ATAAGTGTA-AAAATAGATGAAAC-AAATGTAGCTC  129

seq1  TTAATGGGACTCAAGAAGTTTAATCTAAGAGCCAGAGAACTGGTTGCAT-  199
       |||||||||||||||||||||||||||||| ||||| ||| ||||||| 
seq2  -TAATGGGACTCAAGAAGTTTAATCTAAGAG-CAGAG-ACTTGTTGCATA  176

seq1  AGATCAAGGAGTTTGCCTTGAAAACCCAGAATCTAGAATCCATAGTAAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAGGAGTTTGCCTTGAAAACCCAGAATCTAGAATCCATAGTAAGA  226

seq1  AAACCCAGCCCTGAAAGATGTCTTTTGGATTCTACATGCATGCATCCAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGCCCTGAAAGATGTCTTTTGGATTCTACATGCATGCATCCAAT  276

seq1  GGACACACGTAAAAACAA-TTATGAGCAACTTCTCATAATCACAAAGAAA  348
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGACACACGTAAAAACAATTTATGAGCAACTTCTCATAATCACAAAGAAA  326

seq1  GCCTCTATCTGAGTCTACAGTGCAGCCATTCATGTGTGTATTTAAGTGAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTATCTGAGTCTACAGTGCAGCCATTCATGTGTGTATTTAAGTGAA  376

seq1  CACACAAAGTGGGCATATTTCAAGGTCTCTTCACTTGAGTTGGCATTGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAAGTGGGCATATTTCAAGGTCTCTTCACTTGAGTTGGCATTGTG  426

seq1  AATATACTGTAAATAAGAATGAGGCCCTGAGATGGGAGTAAGAAGTTGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACTGTAAATAAGAATGAGGCCCTGAGATGGGAGTAAGAAGTTGGA  476

seq1  GACCATTATTAACCACTTGCAAATGGAAAATTAGTTTTCTCCAACAATCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTATTAACCACTTGCAAATGGAAAATTAGTTTTCTCCAACAATCT  526

seq1  CACAGGGAATACAAACTATTCTTAAGGGCAGGCCCCATGCCCATCTGTAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGAATACAAACTATTCTTAAGGGCAGGCCCCATGCCCATCTGTAG  576

seq1  ACAACCAAAACAAAAGGAACTCAACACCATTTTTGGAAGTTCCTTGTCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAAAACAAAAGGAACTCAACACCATTTTTGGAAGTTCCTTGTCTC  626

seq1  GTAATGTTTTGTCAGGGTTTTGTTTTGTTTTCCACCTTAAAGGTCCTTTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGTTTTGTCAGGGTTTTGTTTTGTTTTCCACCTTAAAGGTCCTTTG  676

seq1  CATATATATCGTGGTTTTGGTTTTATGTTTTTATGGGGTTTCTCTATATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATCGTGGTTTTGGTTTTATGTTTTTATGGGGTTTCTCTATATG  726

seq1  AAAACATGTAACTCTGCATCTATATGCGTTTCTTAGACTTTATTGGGGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGTAACTCTGCATCTATATGCGTTTCTTAGACTTTATTGGGGAG  776

seq1  TGTCCTTTTCTTCTTCTGTTTGTTCTGTCCTATTCTGATTTGGTTGCTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTTCTTCTTCTGTTTGTTCTGTCCTATTCTGATTTGGTTGCTTT  826

seq1  TATTCTTATTATTTATTAATTACTGTTGTTATTATTGTTCCTACTATTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTATTATTTATTAATTACTGTTGTTATTATTGTTCCTACTATTTT  876

seq1  AGATGCCTGTTTGTATTCTAATGAGAAAGAAACTGTGTGGATTTGGGTGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCTGTTTGTATTCTAATGAGAAAGAAACTGTGTGGATTTGGGTGG  926

seq1  GTGGGTAAGACAGGGAGAGGGCTAGGGGAAGAAAAACCCAAATCAGAATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTAAGACAGGGAGAGGGCTAGGGGAAGAAAAACCCAAATCAGAATA  976

seq1  CATTGTATAAAAACCTGATATTTTAATTTAAAAAGAAGTTGGACGCTTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTATAAAAACCTGATATTTTAATTTAAAAAGAAGTTGGACGCTTTT  1026

seq1  CAAAGCTAAAGGACTTCCATGACTTTACAATTCAGCTAAAACAATGTTTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTAAAGGACTTCCATGACTTTACAATTCAGCTAAAACAATGTTTA  1076

seq1  TCAAAAATAGATCCAAAGAATTC  1121
      |||||||||||||||||||||||
seq2  TCAAAAATAGATCCAAAGAATTC  1099