BAC Information

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BAC

Clone NameB6Ng01-121F21
Chromosome14 (Build37)
Map Location 13,027,897 - 13,161,834
singlet/doubletdoublet
Overlap genePtprg, 3830406C13Rik, EG667072
Upstream geneEG382843, LOC100042427, LOC667059, LOC100041996, LOC100042441
Downstream geneFezf2, Cadps, EG432822, LOC100042022, LOC100042026, EG328354, Synpr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121F21.bB6Ng01-121F21.g
ACCDH925069DH925070
length1,1841,040
definitionDH925069|Mus musculus domesticus DNA, BAC clone: B6Ng01-121F21, 5' end.DH925070|Mus musculus domesticus DNA, BAC clone: B6Ng01-121F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,027,897 - 13,029,099)(13,160,796 - 13,161,834)
sequence
gaattccggggaggcagccacagccgaggcaacatggctctggcttttct
gctcatgctattgagcatacatgcctgattgatagaagctgttgattcaa
cagggctgatgaaaaaagaacagggttctcctgatggctgggttaagtgc
tgcagttgggactatcctttgctattgacttttttcttctttggtgtcaa
accacagatgatagcaagaaagttgactctttttatcagttttcctttta
agagagacattgactctagcatgggtagagtaggttggagaagcctaagg
tattggtgacttactgcttatcattctaaagatgcaaggacttactgtgg
atctgtgaaggggattttcttcatgaccagaagcactggccctcactcct
agcagtggcatgtgagctccccatcatctaagctttgatgccttcatctg
ggcaaacgttgctttattcccttcatcctctcctgccctgctgttggcac
ctacaaggaggttttcttgtggcttagtccacgggaaaggactgccattt
tcatggtgtaattctcatcacaaaaagctaaacctttggagctaagaacg
aaccatcatatttgataacagaagttcatacttcgtaatctgatcctcaa
ctgattatatcaaacttttttttatataatcagtggctttagtgataaca
cgaggtggcctccttttcacctaacagatattctatagcagaaaattctg
caaatgagaatcctggcacagtgtgaccgttatttatcagtgtaaccgag
gtattctactcaatgccatgttcttaacctcttctaactttaagaatgaa
gacagtacattgcaacccaggctctgacttggccaaagctcagctcagcc
attcactttagataagtggcctcaagtgtccttatgtgtatcacacgata
ctttgtttccctacacctggatctgtaagcagactgcattcaaagtgttg
tcctaggctttggcatcggacaggttaatgatgtctctctccgaatatac
actccatcttttatactgtttcccttgtctattccagtattgatttagtc
ttggagttccacagaaatacttcagtcaagcctaacctttcctcatagcc
cctcgcaacattgcatccatcaggtcctgatcac
gaattcctcatatcttacacatctataataaagtgtgtgggtttctctag
ggatgagagccggagcagagctagctgttctgagtgaggtagagtaaaca
tgggatttaaattgtaggtctaggattaatactgagaagatacacggagt
ctctatggttttctttcaaatctataaaattgacataagactactgactg
tctaccacaaaggaatattgtgttggaagaatgtactgtgtctgcgatga
catcccaggaggggagctttgtagaactcacaagtggcgaggagcttaca
acattttctttgcatgacttctgaggagatggtgggaaaggaatagcatt
ggaagtcagtggtgtgggctcagcttccgggacagcatgtacttgctact
caggagacgtttgctttatttcccatgatttttttttaaaacaaggtctt
ttataatatgtagcccttgctgaccttaaacttcagaatctcctacctca
gcttcctcagtgctggatagacaaacagcagcttccatccatgcctggct
ccctgagttctctgctaagggctatgttcctactgagtttgcttctactg
actgttggtgtttttgtatgtatcattttctttactctgcccaagcaccc
ttccttctcctccgcttcattcttgggcctgtcgcctgctcctcgggaag
tgtaacctgctttagtccttcctagaaaatgagggagtgcagtaacactg
ggtgagcgccctttggcccagatttggcttttacagatgagtatctttcg
ggagagccttttctctctctcccttaccatctgagctggactcccttggt
ccttctctgcctcagtcatgtccatgtcttcctttcatcgtttgtgctct
catatgtcatgtatctcattgttcctccaactttgcttcccaaacactca
agtaactcatggtagggtaaggttagagtgtcaagtgccaagttcatatg
ttctggcacatggtaggcatgcacaatttctaactgtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_13027897_13029099
seq2: B6Ng01-121F21.b_48_1231

seq1  GAATTCCGGGGAGGCAGCCACAGCCGAGGCAACATGGCTCTGGCTTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGGGGAGGCAGCCACAGCCGAGGCAACATGGCTCTGGCTTTTCT  50

seq1  GCTCATGCTATTGAGCATACATGCCTGATTGATAGAAGCTGTTGATTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATGCTATTGAGCATACATGCCTGATTGATAGAAGCTGTTGATTCAA  100

seq1  CAGGGCTGATGAAAAAAGAACAGGGTTCTCCTGATGGCTGGGTTAAGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTGATGAAAAAAGAACAGGGTTCTCCTGATGGCTGGGTTAAGTGC  150

seq1  TGCAGTTGGGACTATCCTTTGCTATTGACTTTTTTCTTCTTTGGTGTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTGGGACTATCCTTTGCTATTGACTTTTTTCTTCTTTGGTGTCAA  200

seq1  ACCACAGATGATAGCAAGAAAGTTGACTCTTTTTATCAGTTTTCCTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGATGATAGCAAGAAAGTTGACTCTTTTTATCAGTTTTCCTTTTA  250

seq1  AGAGAGACATTGACTCTAGCATGGGTAGAGTAGGTTGGAGAAGCCTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACATTGACTCTAGCATGGGTAGAGTAGGTTGGAGAAGCCTAAGG  300

seq1  TATTGGTGACTTACTGCTTATCATTCTAAAGATGCAAGGACTTACTGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTGACTTACTGCTTATCATTCTAAAGATGCAAGGACTTACTGTGG  350

seq1  ATCTGTGAAGGGGATTTTCTTCATGACCAGAAGCACTGGCCCTCACTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGAAGGGGATTTTCTTCATGACCAGAAGCACTGGCCCTCACTCCT  400

seq1  AGCAGTGGCATGTGAGCTCCCCATCATCTAAGCTTTGATGCCTTCATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGGCATGTGAGCTCCCCATCATCTAAGCTTTGATGCCTTCATCTG  450

seq1  GGCAAACGTTGCTTTATTCCCTTCATCCTCTCCTGCCCTGCTGTTGGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACGTTGCTTTATTCCCTTCATCCTCTCCTGCCCTGCTGTTGGCAC  500

seq1  CTACAAGGAGGTTTTCTTGTGGCTTAGTCCACGGGAAAGGACTGCCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAGGAGGTTTTCTTGTGGCTTAGTCCACGGGAAAGGACTGCCATTT  550

seq1  TCATGGTGTAATTCTCATCACAAAAAGCTAAACCTTTGGAGCTAAGAACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTGTAATTCTCATCACAAAAAGCTAAACCTTTGGAGCTAAGAACG  600

seq1  AACCATCATATTTGATAACAGAAGTTCATACTTCGTAATCTGATCCTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCATATTTGATAACAGAAGTTCATACTTCGTAATCTGATCCTCAA  650

seq1  CTGATTATATCAAACTTTTTTTTATATAATCAGTGGCTTTAGTGATAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTATATCAAACTTTTTTTTATATAATCAGTGGCTTTAGTGATAACA  700

seq1  CGAGGTGGCCTCCTTTTCACCTAACAGATATTCTATAGCAGAAAATTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGTGGCCTCCTTTTCACCTAACAGATATTCTATAGCAGAAAATTCTG  750

seq1  CAAATGAGAATCCTGGCACAGTGTGACCGTTATTTATCAGTGTAACCGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGAATCCTGGCACAGTGTGACCGTTATTTATCAGTGTAACCGAG  800

seq1  GTATTCTACTCAATGCCATGTTCTTAACCTCTTCTAACTTTAAGAATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTACTCAATGCCATGTTCTTAACCTCTTCTAACTTTAAGAATGAA  850

seq1  GACAGTACATTGCAACCCAGGCTCTGACTTGGCCAAAGCTCAGCTCAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTACATTGCAACCCAGGCTCTGACTTGGCCAAAGCTCAGCTCAGCC  900

seq1  ATTCACTTTAGATAAGTGGCCTCAAGTGTCCTTATGTGTATCACAACGAT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATTCACTTTAGATAAGTGGCCTCAAGTGTCCTTATGTGTATCAC-ACGAT  949

seq1  ACTTTGTTTCCCTACACCTGGATCCTGTAAAGCAGACTGCATTCAAAGTG  1000
      ||||||||||||||||||||||| |||| |||||||||||||||||||||
seq2  ACTTTGTTTCCCTACACCTGGAT-CTGT-AAGCAGACTGCATTCAAAGTG  997

seq1  TTGTCCTAGGCTTTGGCAATCGGGACAGGTTTAATGATGTCTCTCTCCGA  1050
      ||||||||||||||||| ||| ||||||| ||||||||||||||||||||
seq2  TTGTCCTAGGCTTTGGC-ATC-GGACAGG-TTAATGATGTCTCTCTCCGA  1044

seq1  ATTATACCAACTCCATC-TTTATACTGTTTCCC-TGTCTATCCCAGTAAT  1098
      | |||||  |||||||| ||||||||||||||| ||||||| ||||| ||
seq2  A-TATAC--ACTCCATCTTTTATACTGTTTCCCTTGTCTATTCCAGT-AT  1090

seq1  TGATTTTTAAGTC-TGGAGTTTCCACAGAATATACCTTCAGTTCTAGCCT  1147
      ||||||   |||| ||||| |||||||||| ||| |||||| || |||||
seq2  TGATTT---AGTCTTGGAG-TTCCACAGAA-ATA-CTTCAG-TCAAGCCT  1133

seq1  ACCCCTTTTCTTCAT-GCCTCT-GCAACTATTGCATCCATCAGTGGTTTC  1195
      | ||  |||| |||| ||| || ||||| ||||||||||||||     ||
seq2  AACC--TTTCCTCATAGCCCCTCGCAAC-ATTGCATCCATCAG----GTC  1176

seq1  CTGATCAC  1203
      ||||||||
seq2  CTGATCAC  1184

seq1: chr14_13160796_13161834
seq2: B6Ng01-121F21.g_67_1106 (reverse)

seq1  TTCACAGCTTAGAATTGGTGCATGCCTACAATGTGCCAG-ACATA-GGAC  48
      ||||||| |||||| | |||||||||||| ||||||||| ||||| | ||
seq2  TTCACAG-TTAGAAATTGTGCATGCCTACCATGTGCCAGAACATATGAAC  49

seq1  TTGGCACTTGACACTCTAACCTTACCCTACCATGAGTTACTTGGAGTGTT  98
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGGCACTTGACACTCTAACCTTACCCTACCATGAGTTACTT-GAGTGTT  98

seq1  CTGGGGAGCAAAGTTGGAAGGAACAATGAGATACATGACATATGAGAGCA  148
       |||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  -TGGGAAGCAAAGTTGG-AGGAACAATGAGATACATGACATATGAGAGCA  146

seq1  CAAAACGAATGAAAGGAAGACATGGACATGACTGAGGCAGAGAAGGACCA  198
      | ||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  C-AAACG-ATGAAAGGAAGACATGGACATGACTGAGGCAGAGAAGGACCA  194

seq1  AGGGAGTCCAGCTCAGATGGTAAGGGAGAGAGAG-AAAGGCTCTCCCGAA  247
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGGGAGTCCAGCTCAGATGGTAAGGGAGAGAGAGAAAAGGCTCTCCCGAA  244

seq1  AGATACTCATCTGTAAAAGCCAAATCTGGGCC-AAGGGCGCTCA-CCAGT  295
      |||||||||||||||||||||||||||||||| ||||||||||| |||||
seq2  AGATACTCATCTGTAAAAGCCAAATCTGGGCCAAAGGGCGCTCACCCAGT  294

seq1  GTTACTGCACTCCCTCA-TTTCTAGGAAGGACTAAAGCAGGTTACACTTC  344
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTTACTGCACTCCCTCATTTTCTAGGAAGGACTAAAGCAGGTTACACTTC  344

seq1  CCGAGGAGCAGGCGACAGGCCCAAGAATGAAGCGGAGGAGAAGGAAGGGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGAGCAGGCGACAGGCCCAAGAATGAAGCGGAGGAGAAGGAAGGGT  394

seq1  GCTTGGGCAGAGTAAAGAAAATGATACATAC-AAAACACCAACAGTCAGT  443
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCTTGGGCAGAGTAAAGAAAATGATACATACAAAAACACCAACAGTCAGT  444

seq1  AGAAGCAAACTCAGTAGGAACATAGCCCTTAGCAGAGAACTCAGGGAGCC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAAACTCAGTAGGAACATAGCCCTTAGCAGAGAACTCAGGGAGCC  494

seq1  AGGCATGGATGGAAGCTGCTGTTTGTCTATCCAGCACTGAGGAAGCTGAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGGATGGAAGCTGCTGTTTGTCTATCCAGCACTGAGGAAGCTGAG  544

seq1  GTAGGAGATTCTGAAGTTTAAGGTCAGCAAGGGCTACATATTATAAAAGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGATTCTGAAGTTTAAGGTCAGCAAGGGCTACATATTATAAAAGA  594

seq1  CCTTGTTTTAAAAAAAAATCATGGGAAATAAAGCAAACGTCTCCTGAGTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTTTAAAAAAAAATCATGGGAAATAAAGCAAACGTCTCCTGAGTA  644

seq1  GCAAGTACATGCTGTCCCGGAAGCTGAGCCCACACCACTGACTTCCAATG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTACATGCTGTCCCGGAAGCTGAGCCCACACCACTGACTTCCAATG  694

seq1  CTATTCCTTTCCCACCATCTCCTCAGAAGTCATGCAAAGAAAATGTTGTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCTTTCCCACCATCTCCTCAGAAGTCATGCAAAGAAAATGTTGTA  744

seq1  AGCTCCTCGCCACTTGTGAGTTCTACAAAGCTCCCCTCCTGGGATGTCAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTCGCCACTTGTGAGTTCTACAAAGCTCCCCTCCTGGGATGTCAT  794

seq1  CGCAGACACAGTACATTCTTCCAACACAATATTCCTTTGTGGTAGACAGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGACACAGTACATTCTTCCAACACAATATTCCTTTGTGGTAGACAGT  844

seq1  CAGTAGTCTTATGTCAATTTTATAGATTTGAAAGAAAACCATAGAGACTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTCTTATGTCAATTTTATAGATTTGAAAGAAAACCATAGAGACTC  894

seq1  CGTGTATCTTCTCAGTATTAATCCTAGACCTACAATTTAAATCCCATGTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTATCTTCTCAGTATTAATCCTAGACCTACAATTTAAATCCCATGTT  944

seq1  TACTCTACCTCACTCAGAACAGCTAGCTCTGCTCCGGCTCTCATCCCTAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTACCTCACTCAGAACAGCTAGCTCTGCTCCGGCTCTCATCCCTAG  994

seq1  AGAAACCCACACACTTTATTATAGATGTGTAAGATATGAGGAATTC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCACACACTTTATTATAGATGTGTAAGATATGAGGAATTC  1040