BAC Information

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BAC

Clone NameB6Ng01-121H08
Chromosome14 (Build37)
Map Location 4,300,053 - 4,344,639
singlet/doubletdoublet
Overlap geneLOC100040801, LOC666336
Upstream geneLOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076
Downstream geneLOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121H08.bB6Ng01-121H08.g
ACCDH925136DH925137
length1,1621,122
definitionDH925136|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H08, 5' end.DH925137|Mus musculus domesticus DNA, BAC clone: B6Ng01-121H08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,300,053 - 4,301,235)(4,343,502 - 4,344,639)
sequence
gaattctccagctttggaaggagaagttgccaaaggggatcccacgggtc
caagagaggctccaggagaggctccccagaaaaggaccaagctgggcaga
actagttaacaggtaggtcatggcagttgctagtgacatcatcagtaatg
ccttccttggagaatctcttgtatctaggatagaactagaatcttctgtg
ttgtcacctgtgttgtggtgacagcaactgcctgtggttcatcccttctg
tttgctctgggttcaccagcaggaatgttttcctggctgctcaggctatt
tcagaaagagaatggcgatgaaggagagaccagaccaacagagaaggaag
agggaatcctttctcatgaaaaaggaagaaggaaatggttatggagaagg
cacagtgagtcctgggcagagttggggaacttcctggtagaggtaggctt
gagctgggccttccaggagtaggtcttacaagctgaagccttggactttg
tcaatgtcagaaaaagagtcaagaatttctgatgattagtttgacagagc
caggaattgacaaacctgcagctactttgctgggagctatttaatttcat
tttgagtggcaaaaaatgtcaggagtgggcactatgagaataacagtgtg
tcctttcatggaagggagttgaagcacttcatcttccagattactgtagg
taacttgagtctctgatgaaaagaacagagaaggatgctcccctggtcat
gtcatgtggtgaggactcagacacattggatttgaagacactcgattaat
tagtgcttgatagtgctaagcactatgaacttcaggatttccctgcgtcc
catctgatatgacctgacaatgttccccatatctttatgtctgaggcagc
ttatacatttcaaggcaaccgggcctgtaacaggagtgtggcatatgtct
gacatggtggttaggaagaggaacatagcttagcaaacagctggaagata
gctttctgctctttaggattcactgtcttttatctttttctcttcctcat
cttcttctgggactcagaatggtctccctgctctggcatcaagatgcaat
tcttttgtgtttactatctgcaggttgctgaaatactcaccaaaattcaa
atgaacaagaag
gaattcaccattggaaaatcactaacagcactgtgaagttttctaaggtg
gacagcaggaagcctgtccttttcctaccctctccttcagcccctcttcc
cccacctgtgtaggattttgaggtcgaatgtgcattgtgcactgctgctg
caaggtagctcttccctgtggctgtgctgaagcagctggccagggaagcc
tgggagctgaggctccagcctgtggattctctttcctcagactttagtct
ggaccagggagaggtgttctctcctgtggatgtgtgtatatatattcttt
gctttgtactttgttcacgtagttcaatgcattcttccaggcattctgga
tgggcgctttagcctagacatttatttcggcatgttgtcatcttgggctg
catgcatgtcctctcttgtttctgagtcctcaccatgcccttcccagctt
cctgttagccaaagggaatcactctttctgaaccaaaagctctcagagca
gagctgaacctcccagaaaatgctcttctctacctaatgcgccagatggg
ggtgggcccaaagctaaacagcactgtagaggtggcctaaaggccccgaa
cccccaggcagaggtgcggaggtaaggtcctagcaatggtgatgagtgag
ggtccatgagaccgagttcttctcccgggcagagggaacttttacttagc
tggagttgtactttgtggttcgagtatgtggaggtattcggggtccagag
tgcaccccagaacataggagatagccccatgtccccctttccctcaggag
ccttctcctcactcctgctgcctagaacaagggggaggaggatctccact
gcctgacctgctgcttcatgccccttcctatctctacttctatttcctct
gagccctccagaccctaggaggagtgagagggaggtccttcgagcgtatc
tcgacatctgtcatctcattctggtgctgtcatatcctgggtcagcacac
agaacatcccagctgggtacccaggcgtgagtgcaagagactcagagtct
tagcaggggagctgtgatcaaggtccgggttcagtggctgccaaggggat
cccgaagatggtgctatgctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4300053_4301235
seq2: B6Ng01-121H08.b_46_1207

seq1  GAATTCTCCAGCTTTGGAAGGAGAGGTTGCCAAAGGGGATCACACGGGTC  50
      |||||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  GAATTCTCCAGCTTTGGAAGGAGAAGTTGCCAAAGGGGATCCCACGGGTC  50

seq1  CATGAGAGGCTCCAGGAGAGGCACCCCAGAAAAGGACCAAGCTGGGCAGA  100
      || ||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAAGAGAGGCTCCAGGAGAGGCTCCCCAGAAAAGGACCAAGCTGGGCAGA  100

seq1  ACTAGTTAACAGGTAGGTCATGGCAGTTGCTAGTGACATCATCAGTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTAACAGGTAGGTCATGGCAGTTGCTAGTGACATCATCAGTAATG  150

seq1  CCTTCCTTGGAGAATCTCTTGTATCTAGGATAGAACTAGAATCTTCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTGGAGAATCTCTTGTATCTAGGATAGAACTAGAATCTTCTGTG  200

seq1  TTGTCACCTGTGTTGTGGTGACAGCAACTGCCTGTGGTTCATCCCTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACCTGTGTTGTGGTGACAGCAACTGCCTGTGGTTCATCCCTTCTG  250

seq1  TTTGCTCTGGGTTCACCAGCAGGAATGTTTTCCTGGCTGCTCAGGCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCTGGGTTCACCAGCAGGAATGTTTTCCTGGCTGCTCAGGCTATT  300

seq1  TCAGAAAGAGAATGGCGATGAAGGAGAGACCAGACCAACAGAGAAGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGAGAATGGCGATGAAGGAGAGACCAGACCAACAGAGAAGGAAG  350

seq1  AGGGAATCCTTTCTCATGAAAAAGAAAGAAGGAAATGGTTCTGGAGAAGG  400
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  AGGGAATCCTTTCTCATGAAAAAGGAAGAAGGAAATGGTTATGGAGAAGG  400

seq1  CACAGTGAGTCCTGGGCAGAGTTGGGGAACTTCCTGGTAGAGGTAGGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGAGTCCTGGGCAGAGTTGGGGAACTTCCTGGTAGAGGTAGGCTT  450

seq1  GAGCTGGGCCTTCCAGGAGTAGGTCTTACAAGCTGAAGCCTTGGACTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGGCCTTCCAGGAGTAGGTCTTACAAGCTGAAGCCTTGGACTTTG  500

seq1  TCAATGTCAGAAAAAGAGTCAAGAATTTCTGATGATTAGTTTGACAGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTCAGAAAAAGAGTCAAGAATTTCTGATGATTAGTTTGACAGAGC  550

seq1  CAGGAATTGACAAACCTGCAGCTACTTTTCTGGGAGCTATTTAATTTCAT  600
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAGGAATTGACAAACCTGCAGCTACTTTGCTGGGAGCTATTTAATTTCAT  600

seq1  TTTGAGTGGCAAAAAATGTCAGGAGTGGGCACTATGAGAATAACAGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTGGCAAAAAATGTCAGGAGTGGGCACTATGAGAATAACAGTGTG  650

seq1  TCCTTTCATGGAAGGGAGTTGAAGCACTTCATCTTCCAGATTACTGTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCATGGAAGGGAGTTGAAGCACTTCATCTTCCAGATTACTGTAGG  700

seq1  TAACCTGAGTCTCTGATGAAAAGAACAGAGAAGGATGCTCCCCTGGTCAT  750
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGAGTCTCTGATGAAAAGAACAGAGAAGGATGCTCCCCTGGTCAT  750

seq1  GTCATGTGGTGAGGACTCAGACACATTGGATTTGAAGACACACAATTAAT  800
      ||||||||||||||||||||||||||||||||||||||||| | ||||||
seq2  GTCATGTGGTGAGGACTCAGACACATTGGATTTGAAGACACTCGATTAAT  800

seq1  TAGTGCTTGATAGTGCTAAGCACTATGAACTTCAGGACTTCCCTGCGTCC  850
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAGTGCTTGATAGTGCTAAGCACTATGAACTTCAGGATTTCCCTGCGTCC  850

seq1  CATCTGATATGACCTGACAATGTTCCCCATATCTTTATGTCTGAGGCAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGATATGACCTGACAATGTTCCCCATATCTTTATGTCTGAGGCAGC  900

seq1  TTATACATTTCAAGGCAACCGGGCCTGTAACAGGGAGTGTGGCATATGTC  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTATACATTTCAAGGCAACCGGGCCTGTAACA-GGAGTGTGGCATATGTC  949

seq1  TGACAATGGTGGTTAGGAAGAGGAACATAGCTTAGCAAACCAGCTGGAAG  1000
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGAC-ATGGTGGTTAGGAAGAGGAACATAGCTTAGCAAA-CAGCTGGAAG  997

seq1  ATAGCTTTTCTGCTCTTTTAGGAATTCACTGTC-TTTATC-TTTTCTCTC  1048
      ||||| ||||||||| |||||| |||||||||| |||||| |||||||| 
seq2  ATAGC-TTTCTGCTC-TTTAGG-ATTCACTGTCTTTTATCTTTTTCTCTT  1044

seq1  CCTCCATCTTCTTCTTGGGACTCAGAATGGTCTCCCCTGCCCCTGGGCCA  1098
      ||| |||||||||| |||||||||||||||||| ||||| | ||||  ||
seq2  CCT-CATCTTCTTC-TGGGACTCAGAATGGTCT-CCCTG-CTCTGG--CA  1088

seq1  TCAAGTATGCAAATTCTTTTGTGTTTACCTATCTGCAGGGTCTGCTAGAA  1148
      ||||| |||| |||||||||||||||| |||||||||||   |||| |||
seq2  TCAAG-ATGC-AATTCTTTTGTGTTTA-CTATCTGCAGG--TTGCT-GAA  1132

seq1  ATACTTCAACCCAAAATTCCAAAATGACCAAGAAG  1183
      |||| |||  |||||||||  |||||| |||||||
seq2  ATAC-TCA--CCAAAATTC--AAATGAACAAGAAG  1162

seq1: chr14_4343502_4344639
seq2: B6Ng01-121H08.g_67_1188 (reverse)

seq1  CTAGC-TAGCACCATCTTCTGCGATCCCCTCCGCGCAGCACCCTGGACCC  49
      ||||| ||||||||||||| | ||||||||    ||||| | ||| ||||
seq2  CTAGCATAGCACCATCTTC-GGGATCCCCT--TGGCAGC-CACTGAACCC  46

seq1  GGGACCCTGGATCACAAGCCTCCCCTGCCTAGATCTCTTGGGTCCTCTGT  99
      ||   ||| |||||||   |||||||||  ||| ||| || || |||| |
seq2  GG--ACCTTGATCACA--GCTCCCCTGCTAAGA-CTC-TGAGT-CTCT-T  88

seq1  GCACTTCATGCCTGGGCACCCAGCCTTGGGATGTTCTGGTGTTGCTGACC  149
      |||| ||| ||||||| |||||||  ||||||||||| ||| ||||||||
seq2  GCAC-TCACGCCTGGGTACCCAGC--TGGGATGTTCT-GTG-TGCTGACC  133

seq1  CAGGATATGACCAGCACCAGAATGAGATGACAGATGTCGAGATACGCCTC  199
      |||||||||| ||||||||||||||||||||||||||||||||||| |||
seq2  CAGGATATGA-CAGCACCAGAATGAGATGACAGATGTCGAGATACG-CTC  181

seq1  GAAGGACCTCCCTCTCACTCCTCCTAGGGTCTGGAGGGCTCAGAGGAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACCTCCCTCTCACTCCTCCTAGGGTCTGGAGGGCTCAGAGGAAAT  231

seq1  AG-AGTAGAGATAGGAAGGGGCATGAAGCAGCAGGTCAGGCAGTGGAGAT  298
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGAGATAGGAAGGGGCATGAAGCAGCAGGTCAGGCAGTGGAGAT  281

seq1  CCTCCT-CCCCTTGTTCTAGGCAGCAGGAGTGAGGAGAAGGCTCCTGAGG  347
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCCCCTTGTTCTAGGCAGCAGGAGTGAGGAGAAGGCTCCTGAGG  331

seq1  GAAAGGGGGACATGGAGCTATCTCCTATGTTCTGGGGTGCACTCTGGACC  397
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAAAGGGGGACATGGGGCTATCTCCTATGTTCTGGGGTGCACTCTGGACC  381

seq1  CCGAATCCCTCCACATACTCGGACCACAAAGTACAACTCCAGCTAAGTAA  447
      |||||| |||||||||||||| ||||||||||||||||||||||||||||
seq2  CCGAATACCTCCACATACTCGAACCACAAAGTACAACTCCAGCTAAGTAA  431

seq1  AAGTTCCCTCTGCCCGGGAGAAGAACTCGGTCTCATGGACCCTCACTCAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGTTCCCTCTGCCCGGGAGAAGAACTCGGTCTCATGGACCCTCACTCAT  481

seq1  CACCATTGCTAGGACCTTACCTCCGCACCTCTGCCTGGGGGTTCGGGGCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTGCTAGGACCTTACCTCCGCACCTCTGCCTGGGGGTTCGGGGCC  531

seq1  TTTAGGCCACCTCTACAGTGCTGTTTAGCTTTGGGCCCACCCCCATCTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCCACCTCTACAGTGCTGTTTAGCTTTGGGCCCACCCCCATCTGG  581

seq1  CGCATTAGGTAGAGAAGAGCATTTTCTGGGAGGTTCAGCTCTGCTCTGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATTAGGTAGAGAAGAGCATTTTCTGGGAGGTTCAGCTCTGCTCTGAG  631

seq1  AGCTTTTGGTTCAGAAAGAGTGATTCCCTTTGGCTAACAGGAAGCTGGGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTGGTTCAGAAAGAGTGATTCCCTTTGGCTAACAGGAAGCTGGGA  681

seq1  AGGGCATGGTGAGGACTCAGAAACAAGAGAGGACATGCATGCAGCCCAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATGGTGAGGACTCAGAAACAAGAGAGGACATGCATGCAGCCCAAG  731

seq1  ATGACAACATGCCGAAATAAATGTCTAGGCTAAAGCGCCCATCCAGAATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAACATGCCGAAATAAATGTCTAGGCTAAAGCGCCCATCCAGAATG  781

seq1  CCTGGAAGAATGCATTGAACTACGTGAACAAAGTACAAAGCAAAGAATAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGAATGCATTGAACTACGTGAACAAAGTACAAAGCAAAGAATAT  831

seq1  ATATACACACATCCACAGGAGAGAACACCTCTCCCTGGTCCAGACTAAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACACATCCACAGGAGAGAACACCTCTCCCTGGTCCAGACTAAAG  881

seq1  TCTGAGGAAAGAGAATCCACAGGCTGGAGCCTCAGCTCCCAGGCTTCCCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGAAAGAGAATCCACAGGCTGGAGCCTCAGCTCCCAGGCTTCCCT  931

seq1  GGCCAGCTGCTTCAGCACAGCCACAGGGAAGAGCTACCTTGCAGCAGCAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCTGCTTCAGCACAGCCACAGGGAAGAGCTACCTTGCAGCAGCAG  981

seq1  TGCACAATGCACATTCGACCTCAAAATCCTACACAGGTGGGGGAAGAGGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAATGCACATTCGACCTCAAAATCCTACACAGGTGGGGGAAGAGGG  1031

seq1  GCTGAGGGAGAGGGTAGGAAAAGGACAGGCTTCCTGCTGTCCACCTTAGA  1097
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGGAGAGGGTAGGAAAAGGACAGGCTTCCTGCTGTCCACCTTAGA  1081

seq1  AAACTTCACAGTGCTGTTAGTGATTTTCCAATGGTGAATTC  1138
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCACAGTGCTGTTAGTGATTTTCCAATGGTGAATTC  1122