BAC Information

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BAC

Clone NameB6Ng01-121I09
Chromosome14 (Build37)
Map Location 107,287,496 - 107,431,284
singlet/doubletdoublet
Overlap genenone
Upstream geneSpry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
Downstream geneLOC668752, EG668754
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121I09.bB6Ng01-121I09.g
ACCDH925184DH925185
length1,0221,156
definitionDH925184|Mus musculus domesticus DNA, BAC clone: B6Ng01-121I09, 5' end.DH925185|Mus musculus domesticus DNA, BAC clone: B6Ng01-121I09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,287,496 - 107,288,411)(107,430,085 - 107,431,284)
sequence
gaattcattggaggacagcagaggcagttgaagtcagagaataagaagga
gccaaaatattacaacaatttgccagagctaatatgagaccaagcagaga
aagtcagtaagaagctgagagaaaccagatagcttcagttagcatggaga
ggagtttgggccagaacaactgagttgaaacaaccagactgagtttagaa
ggacatagaaagtttgagcttattcagcagtaaatctcctggatgacaat
tgcatctgatgagtaaaagttaattttccactgccctagagatttatgta
cctagtgtcactgcattggagaagcccactttccctctctataagccgac
ataaatgacagcccaggtgacaacctttaccccagtggctaggtatttac
tcattcatttttaattaaaaagtaaaatacaataagataaagccaacact
atcacatcaaagttgctcaggaaaaacaacagaagaaaagaggtggcaca
agaaacagagacccattcatttgcacactcatgaattccgtaaaacatta
aactagaagccataatatagcatcctgtgcgtggtgcttgagagcactgt
gtaagttcatatgaaccttttccgtattagcttagaggacctttatttta
caggtgtctcccattcctttatatcctttgtgattattcttctgttgagt
tctctgagctctgagcaggatgcgtggggtagtggtatgactgaaacatc
caatttagggttgaatgttccaaagtccctcactctctacctaaataatt
cctgactgtagatctatgtagtaattcctacctgctccatgaagaccctt
gtctaatggtggctgaacgtggcattgatctgtgaatataggagaatatc
atttggagtcattttatcacagcatactttttcttttcttagaccagtgt
tacttggtttttaccatagcgccctggattatttttcttggtttcttgat
cacccagcatgcccactatgga
gaattcatcacttatgaaaagaactggtattcagttaccaaaatatataa
aaatatattttcaaatgttataatccataatatagataaattcagagtag
accacattttttcaagcgtagatttttttactaataaactaattgagata
aataaaagagaaaaataataaaaaattaagttacttttcaggggtgaaaa
tgccatctaaaactcaacaggaacattaagaattccttgtcaccatcctt
tatgtcttataaattcataagtgattacatttatagtggaaataagaaag
atacatttagccaggtagtggtggcacatgcctttaatcccagcacttgg
gtggcagaggaaggtggatttctaagttcgaggccagcttggtctacaga
gtgagttccaggacagccagtactacacagagaaaccctgtctcaagaaa
aaaaaatagataaatttaatactcttactatttatagctactaaaactcg
tttttttaaaaatatatttgcagtattcttttgtcccccaatcctattgc
cagtttccctgtaatatggtgtaccccctaaggaaatataactttgtcct
gctgatggatggtagatagttgggcaaggtttcactcataaaggaacata
cgatttataaattcacatatggcttctcgggatgacatccaagtacctgc
agtttgggcagtttgatgaacttcatgatctctgttggaatataaaaata
tattatgaataatccagcagtgatgtaccctaacactaagacccccaaag
gaggatgccttgtagccacataaacaagagaggagactaatgtgacggaa
gatatgaaaggatacttcatttaagtcttgagcttggtatgatggtcttg
atgtaaagtgaagaactacaggtacctgtgtggtcctttcttctctcaga
tgtttactagaatatgtcatttaaggtgtatttattctaataatacacac
tggagaacagaaagtacaaagaagctattttcataatttcatactgcaac
actacacaatgggtgggctgatattttagctatggccagaattacatact
gttcagtctttattatacgatcctgaatactgcattgaccaagagattaa
tgcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_107287496_107288411
seq2: B6Ng01-121I09.b_44_959

seq1  GAATTCATTGGAGGACAGCAGAGGCAGTTGAAGTCAGAGAATAAGAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGAGGACAGCAGAGGCAGTTGAAGTCAGAGAATAAGAAGGA  50

seq1  GCCAAAATATTACAACAATTTGCCAGAGCTAATATGAGACCAAGCAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAATATTACAACAATTTGCCAGAGCTAATATGAGACCAAGCAGAGA  100

seq1  AAGTCAGTAAGAAGCTGAGAGAAACCAGATAGCTTCAGTTAGCATGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTAAGAAGCTGAGAGAAACCAGATAGCTTCAGTTAGCATGGAGA  150

seq1  GGAGTTTGGGCCAGAACAACTGAGTTGAAACAACCAGACTGAGTTTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTGGGCCAGAACAACTGAGTTGAAACAACCAGACTGAGTTTAGAA  200

seq1  GGACATAGAAAGTTTGAGCTTATTCAGCAGTAAATCTCCTGGATGACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAGAAAGTTTGAGCTTATTCAGCAGTAAATCTCCTGGATGACAAT  250

seq1  TGCATCTGATGAGTAAAAGTTAATTTTCCACTGCCCTAGAGATTTATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTGATGAGTAAAAGTTAATTTTCCACTGCCCTAGAGATTTATGTA  300

seq1  CCTAGTGTCACTGCATTGGAGAAGCCCACTTTCCCTCTCTATAAGCCGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTGTCACTGCATTGGAGAAGCCCACTTTCCCTCTCTATAAGCCGAC  350

seq1  ATAAATGACAGCCCAGGTGACAACCTTTACCCCAGTGGCTAGGTATTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGACAGCCCAGGTGACAACCTTTACCCCAGTGGCTAGGTATTTAC  400

seq1  TCATTCATTTTTAATTAAAAAGTAAAATACAATAAGATAAAGCCAACACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATTTTTAATTAAAAAGTAAAATACAATAAGATAAAGCCAACACT  450

seq1  ATCACATCAAAGTTGCTCAGGAAAAACAACAGAAGAAAAGAGGTGGCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATCAAAGTTGCTCAGGAAAAACAACAGAAGAAAAGAGGTGGCACA  500

seq1  AGAAACAGAGACCCATTCATTTGCACACTCATGAATTCCGTAAAACATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGAGACCCATTCATTTGCACACTCATGAATTCCGTAAAACATTA  550

seq1  AACTAGAAGCCATAATATAGCATCCTGTGCGTGGTGCTTGAGAGCACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAAGCCATAATATAGCATCCTGTGCGTGGTGCTTGAGAGCACTGT  600

seq1  GTAAGTTCATATGAACCTTTTCCGTATTAGCTTAGAGGACCTTTATTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTCATATGAACCTTTTCCGTATTAGCTTAGAGGACCTTTATTTTA  650

seq1  CAGGTGTCTCCCATTCCTTTATATCCTTTGTGATTATTCTTCTGTTGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTCTCCCATTCCTTTATATCCTTTGTGATTATTCTTCTGTTGAGT  700

seq1  TCTCTGAGCTCTGAGCAGGATGCGTGGGGTAGTGGTATGACTGAAACATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGCTCTGAGCAGGATGCGTGGGGTAGTGGTATGACTGAAACATC  750

seq1  CAATTTAGGGTTGAATGTTCCAAAGTCCCTCACTCTCTACCTAAATAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAGGGTTGAATGTTCCAAAGTCCCTCACTCTCTACCTAAATAATT  800

seq1  CCTGACTGTAGATCTATGTAGTAATTCCTACCTGCTCCATGAAGACCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTGTAGATCTATGTAGTAATTCCTACCTGCTCCATGAAGACCCTT  850

seq1  GTCTAATGGTGGCTGAACGTGGCATTGATCTGTGAATATAGGAGAATATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATGGTGGCTGAACGTGGCATTGATCTGTGAATATAGGAGAATATC  900

seq1  ATTTGGAGTCATTTTA  916
      ||||||||||||||||
seq2  ATTTGGAGTCATTTTA  916

seq1: chr14_107430085_107431284
seq2: B6Ng01-121I09.g_66_1221 (reverse)

seq1  AATGCATATAATATCTTCTATGTGTCAAATGCAGGTTTATCTAGAGGATC  50
      ||||||| |||| ||||      ||| |||||||     | |  ||||||
seq2  AATGCAT-TAATCTCTT-----GGTC-AATGCAG-----TATTCAGGATC  38

seq1  TGGTAATAAATATAAAGACATGGAAACCAGAGTATAGCTAATTCTGGCCC  100
        || |||   |||||||| ||  |||   |||||   ||||||||||| 
seq2  --GT-ATA---ATAAAGAC-TG--AAC---AGTAT--GTAATTCTGGCC-  73

seq1  AATAGCATAAAATAATCAAGCCCACACAATTGTGTAGTGTTGCAAGGTAT  150
       ||||| |||||| ||| ||||||| | ||||||||||||||||  ||||
seq2  -ATAGC-TAAAAT-ATC-AGCCCAC-CCATTGTGTAGTGTTGCA--GTAT  116

seq1  GAAAAATTATGAAAAATAGCTTTCTTTGTTACTTTCTGTTCTCCAGTGTG  200
      |  |||||||| |||||||| ||||||| |||||||||||||||||||||
seq2  G--AAATTATG-AAAATAGC-TTCTTTG-TACTTTCTGTTCTCCAGTGTG  161

seq1  TATTTATTAGGAATAAATACACCTTAAAATGAACATAATTCTAGTAAACA  250
      || |||||| ||||||||||||||| ||||| |||| |||||||||||||
seq2  TA-TTATTA-GAATAAATACACCTT-AAATG-ACAT-ATTCTAGTAAACA  206

seq1  TCTTGAGAGAAGAAAGGGCCACACAGGTACCTGTAGTTCTTCACTTTACA  300
      || |||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TC-TGAGAGAAGAAAGGACCACACAGGTACCTGTAGTTCTTCACTTTACA  255

seq1  TCAAGACCATCATACCAAGCTCAAGACTTAAATGAAGTATCC-TTCATAT  349
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCAAGACCATCATACCAAGCTCAAGACTTAAATGAAGTATCCTTTCATAT  305

seq1  CTTCCGTCACATTAGTCTCCTCTCTTGTTTATGTGGCTACAAGGCATCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCGTCACATTAGTCTCCTCTCTTGTTTATGTGGCTACAAGGCATCCT  355

seq1  CCTTTGGGGGTCTTAGTGTTAGGGTACATCACTGCTGGATTATTCATAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGGGGTCTTAGTGTTAGGGTACATCACTGCTGGATTATTCATAAT  405

seq1  ATATTTTTATATTCCAACAGAGATCATGAAGTTCATCAAACTGCCCAAAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTATATTCCAACAGAGATCATGAAGTTCATCAAACTGCCCAAAC  455

seq1  TGCAGGTACTTGGATGTCATCCCGAGAAGCCATATGTGAATTTATAAATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTACTTGGATGTCATCCCGAGAAGCCATATGTGAATTTATAAATC  505

seq1  GTATGTTCCTTTATGAGTGAAACCTTGCCCAACTATCTACCATCCATCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTCCTTTATGAGTGAAACCTTGCCCAACTATCTACCATCCATCAG  555

seq1  CAGGACAAAGTTATATTTCCTTAGGGGGTACACCATATTACAGGGAAACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAAAGTTATATTTCCTTAGGGGGTACACCATATTACAGGGAAACT  605

seq1  GGCAATAGGATTGGGGGACAAAAGAATACTGCAAATATATTTTTAAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATAGGATTGGGGGACAAAAGAATACTGCAAATATATTTTTAAAAAA  655

seq1  ACGAGTTTTAGTAGCTATAAATAGTAAGAGTATTAAATTTATCTATTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGTTTTAGTAGCTATAAATAGTAAGAGTATTAAATTTATCTATTTTT  705

seq1  TTTTCTTGAGACAGGGTTTCTCTGTGTAGTACTGGCTGTCCTGGAACTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGAGACAGGGTTTCTCTGTGTAGTACTGGCTGTCCTGGAACTCA  755

seq1  CTCTGTAGACCAAGCTGGCCTCGAACTTAGAAATCCACCTTCCTCTGCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAGACCAAGCTGGCCTCGAACTTAGAAATCCACCTTCCTCTGCCA  805

seq1  CCCAAGTGCTGGGATTAAAGGCATGTGCCACCACTACCTGGCTAAATGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGCTGGGATTAAAGGCATGTGCCACCACTACCTGGCTAAATGTA  855

seq1  TCTTTCTTATTTCCACTATAAATGTAATCACTTATGAATTTATAAGACAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTATTTCCACTATAAATGTAATCACTTATGAATTTATAAGACAT  905

seq1  AAAGGATGGTGACAAGGAATTCTTAATGTTCCTGTTGAGTTTTAGATGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATGGTGACAAGGAATTCTTAATGTTCCTGTTGAGTTTTAGATGGC  955

seq1  ATTTTCACCCCTGAAAAGTAACTTAATTTTTTATTATTTTTCTCTTTTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACCCCTGAAAAGTAACTTAATTTTTTATTATTTTTCTCTTTTAT  1005

seq1  TTATCTCAATTAGTTTATTAGTAAAAAAATCTACGCTTGAAAAAATGTGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCAATTAGTTTATTAGTAAAAAAATCTACGCTTGAAAAAATGTGG  1055

seq1  TCTACTCTGAATTTATCTATATTATGGATTATAACATTTGAAAATATATT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCTGAATTTATCTATATTATGGATTATAACATTTGAAAATATATT  1105

seq1  TTTATATATTTTGGTAACTGAATACCAGTTCTTTTCATAAGTGATGAATT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATTTTGGTAACTGAATACCAGTTCTTTTCATAAGTGATGAATT  1155

seq1  C  1200
      |
seq2  C  1156