BAC Information

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BAC

Clone NameB6Ng01-121L23
Chromosome14 (Build37)
Map Location 47,108,066 - 47,249,718
singlet/doubletdoublet
Overlap geneLOC100041754
Upstream genePlekhc1, EG382884, Ddhd1, EG637379, LOC666834, LOC100041685, LOC625377, LOC218963, LOC100041724, Bmp4, LOC100041732
Downstream geneCdkn3, Cnih, Gmfb, Cgrrf1, Samd4, Gch1, Wdhd1, Socs4, LOC670795, C130032J12Rik, Lgals3, Dlg7, LOC666895, Fbxo34, D14Ertd436e, EG625730, LOC100042787
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121L23.bB6Ng01-121L23.g
ACCDH925354DH925355
length1,2321,124
definitionDH925354|Mus musculus domesticus DNA, BAC clone: B6Ng01-121L23, 5' end.DH925355|Mus musculus domesticus DNA, BAC clone: B6Ng01-121L23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,248,490 - 47,249,718)(47,108,066 - 47,109,210)
sequence
gaattccttattcaaagcaaatgtgtatcatctgtgcagctagagttcca
tggtcctcatgtccctttgtctgtattctctaacatagaaagggtggatt
gggagcgatggggaggagagatgcctcacagggaccccgtggcttggagg
atgtatctatgggcaaggtcaagtgcagctaggaggaagggcagtgcagg
aagtcatctccctagataagtgggatcttgcagttctgtgtgctcttcaa
ggccatctactgcaggatggatgtggctaaaccatggggagctctgagag
ccctgaatctccttcttgacttcacaactcctgggagggtgtgtggtcac
tccatggtatgtgaagtggtcacagggtggcattattcaaatcatctctc
accttcagattcattctcctatcaacaacaatctaaaaaaaaaagatgga
aacaaatccttagggtttttttgtttgtttgttttaatgaatggcggctc
ttttcctgtgtcacttagtaaaataaatgaccctttctataacaacaaag
ccactagtcttgggagaagagtaagttgggtcatgttgcctgggtgactt
gcccaggaaatgggtccgtgaacacagcactagtgaagaagggaagcttt
tccaggggactttttggggtgcggaatggtaaatggacaagttgtaccaa
cggacacatgagaagggacactgatgatgaaagaccctagggagacacca
aggccactcctgggcaagaaatcaagtggaatgaatggtacaaagccata
cagacaagtgtgctttcttccccaagcaatttgggtacagtgatttctag
ggccgaagtccccaggtgtcacctgtacaccgtgaaaccttaagtcacct
agttccaaagcagcactctgagcatttagattcaagaaagaatgcccata
tctgcttttcattagttctcaggggacgcagggctccatccagactaaga
aacccacatgacagtagaagacaacagggtttttttttttttagacaggg
tctttacttttatatggttctccaatgctggccagaagaactcaggaatc
ttccaatcccagccttccgagtgcctaaaaatttacgaattatgttgtca
cactgtgcctaaacattgattttaattgcaacgttctggattaaatacct
gtttgatgaccttggggtaagaagcctacatt
gaattcttgacctggagaaccaccagagaagagatttctgatgcttcaag
ttacacatttgttatggtagacacacacacacacacacacacacacacac
acacacacacacacacacacagcaaagaataaccaaatacatagcctaaa
aaggtttgatagtaattggaattgtgtttcttcaaagttcacattttaga
ggactcatctagcagaattgatatctgtgatcgctatttttccttgttaa
cttgactaccactggaattaactaaaacctcagaaggaactttgttcatg
atgccttgtgacctcagattttcagcctgcagaactattggaagtaaatt
tttattgtaaaaagcatccatctgtctctggtactgttatgatagccttg
ggagactaacatggcatggcagagagactttctgaacgtaaactgaaggt
gtccagggtatcagccatcgagagagcacatctcaatgagctgatgagct
aagagctgcagcttcctacctgcacactaggggagggtttagaacataaa
accctatttgctcagaaacaaggtgggattttcaattctatttctgaagt
agtgaatataaccagtaaatgtatttttccttaaaaatctcattctgaaa
tgatgctttttaatataattgatatatcttataatcaaggagaccaagta
cattgcagtgtatactactaagcacttcacatactccaataacctagaag
tggggtgctatttgtggactgttggggcccacctgtgccagttcataaaa
gctaattgtgctcatttttactccagtccagctacatcttgaggttagca
cagctgggtatacatcattgaaagtgttagttaccaaccaacctatagcc
agactaggcacatggccatgcctttcacataaagaggctaaagagatgat
tacagtctttattccagaacttgggagccagagacgttgatttggagtct
gagccaacctggtccagagagctatttccaggtagcctagcacaaagaat
actctgttctcaaaagaaaagaaaatccaggtggggggagctcaagttgc
tctcttagtatacaggccttgatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_47248490_47249718
seq2: B6Ng01-121L23.b_48_1279 (reverse)

seq1  AATGTAGCTTACTTACCCCAAGGTCATTCAAAACAGATAATTAAATTCAG  50
      |||||||  | ||||||||||||||||   |||||| | ||| ||| |||
seq2  AATGTAGGCTTCTTACCCCAAGGTCAT--CAAACAGGT-ATTTAATCCAG  47

seq1  GAAACATTTTCAATATAAAATCAATGTTTGAGGCA-GGTGTGACAACATA  99
        |||  || |||| |||||||||||||| |||||  |||||||||||||
seq2  --AAC-GTTGCAAT-TAAAATCAATGTTT-AGGCACAGTGTGACAACATA  92

seq1  TATCTGTAA--TCTTA-GCACTCTGGAAGCTGGGA-TGGGAGAATCCTGA  145
       ||  ||||  | ||| |||||| | | ||||||| ||| ||| ||||||
seq2  -ATTCGTAAATTTTTAGGCACTCGGAAGGCTGGGATTGGAAGATTCCTGA  141

seq1  GT--CTCTGGCCAGCA-TGGAGACCAATATAAAAGT-AAGACCCTGTCT-  190
      ||   ||||||||||| |||||| | |||||||||| |||||||||||| 
seq2  GTTCTTCTGGCCAGCATTGGAGAACCATATAAAAGTAAAGACCCTGTCTA  191

seq1  AAAAAAAAAAAACCCTG-TGTC-TCTACTGTCATGTGGGTTTCTTGGTCT  238
      ||||||||||||||||| |||| |||||||||||||||||||||| ||||
seq2  AAAAAAAAAAAACCCTGTTGTCTTCTACTGTCATGTGGGTTTCTTAGTCT  241

seq1  GGATGGAGCCCTGCGTCCCCTGAGAACTAATGAAAAGCAGATATGGGCAT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGCCCTGCGTCCCCTGAGAACTAATGAAAAGCAGATATGGGCAT  291

seq1  TCTTTCTTGAATCTAAATGCTCAGAGTGCTGCTTTGGAACTAGGTGACTT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTGAATCTAAATGCTCAGAGTGCTGCTTTGGAACTAGGTGACTT  341

seq1  AAGGTTTCACGGTGTACAGGTGACACCTGGGGACTTCGGCCCTAGAAATC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTCACGGTGTACAGGTGACACCTGGGGACTTCGGCCCTAGAAATC  391

seq1  ACTGTACCCAAATTGCTTGGGGAAGAAAGCACACTTGTCTGTATGGCTTT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACCCAAATTGCTTGGGGAAGAAAGCACACTTGTCTGTATGGCTTT  441

seq1  GTACCATTCATTCCACTTGATTTCTTGCCCAGGAGTGGCCTTGGTGTCTC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATTCATTCCACTTGATTTCTTGCCCAGGAGTGGCCTTGGTGTCTC  491

seq1  CCTAGGGTCTTTCATCATCAGTGTCCCTTCTCATGTGTCCGTTGGTACAA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGTCTTTCATCATCAGTGTCCCTTCTCATGTGTCCGTTGGTACAA  541

seq1  CTTGTCCATTTACCATTCCGCACCCCAAAAAGTCCCCTGGAAAAGCTTCC  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCATTTACCATTCCGCACCCCAAAAAGTCCCCTGGAAAAGCTTCC  591

seq1  CTTCTTCACTAGTGCTGTGTTCACGGACCCATTTCCTGGGCAAGTCACCC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCACTAGTGCTGTGTTCACGGACCCATTTCCTGGGCAAGTCACCC  641

seq1  AGGCAACATGACCCAACTTACTCTTCTCCCAAGACTAGTGGCTTTGTTGT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACATGACCCAACTTACTCTTCTCCCAAGACTAGTGGCTTTGTTGT  691

seq1  TATAGAAAGGGTCATTTATTTTACTAAGTGACACAGGAAAAGAGCCGCCA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAGGGTCATTTATTTTACTAAGTGACACAGGAAAAGAGCCGCCA  741

seq1  TTCATTAAAACAAACAAACAAAAAAACCCTAAGGATTTGTTTCCATCTTT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAAAACAAACAAACAAAAAAACCCTAAGGATTTGTTTCCATCTTT  791

seq1  TTTTTTTAGATTGTTGTTGATAGGAGAATGAATCTGAAGGTGAGAGATGA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAGATTGTTGTTGATAGGAGAATGAATCTGAAGGTGAGAGATGA  841

seq1  TTTGAATAATGCCACCCTGTGACCACTTCACATACCATGGAGTGACCACA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATAATGCCACCCTGTGACCACTTCACATACCATGGAGTGACCACA  891

seq1  CACCCTCCCAGGAGTTGTGAAGTCAAGAAGGAGATTCAGGGCTCTCAGAG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCCCAGGAGTTGTGAAGTCAAGAAGGAGATTCAGGGCTCTCAGAG  941

seq1  CTCCCCATGGTTTAGCCACATCCATCCTGCAGTAGATGGCCTTGAAGAGC  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCATGGTTTAGCCACATCCATCCTGCAGTAGATGGCCTTGAAGAGC  991

seq1  ACACAGAACTGCAAGATCCCACTTATCTAGGGAGATGACTTCCTGCACTG  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAACTGCAAGATCCCACTTATCTAGGGAGATGACTTCCTGCACTG  1041

seq1  CCCTTCCTCCTAGCTGCACTTGACCTTGCCCATAGATACATCCTCCAAGC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCTCCTAGCTGCACTTGACCTTGCCCATAGATACATCCTCCAAGC  1091

seq1  CACGGGGTCCCTGTGAGGCATCTCTCCTCCCCATCGCTCCCAATCCACCC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGGTCCCTGTGAGGCATCTCTCCTCCCCATCGCTCCCAATCCACCC  1141

seq1  TTTCTATGTTAGAGAATACAGACAAAGGGACATGAGGACCATGGAACTCT  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATGTTAGAGAATACAGACAAAGGGACATGAGGACCATGGAACTCT  1191

seq1  AGCTGCACAGATGATACACATTTGCTTTGAATAAGGAATTC  1229
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCACAGATGATACACATTTGCTTTGAATAAGGAATTC  1232

seq1: chr14_47108066_47109210
seq2: B6Ng01-121L23.g_66_1189

seq1  GAATTCTTGACCTGGAGAACCACCAGAGAAGAGATTTCTGATGCTTCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACCTGGAGAACCACCAGAGAAGAGATTTCTGATGCTTCAAG  50

seq1  TTACACATTTGTTATGGTAGACACACACACACACACACACACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACATTTGTTATGGTAGACACACACACACACACACACACACACACAC  100

seq1  ACACACACACACACACACACAGCAAAGAATAACCAAATACATAGCCTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACAGCAAAGAATAACCAAATACATAGCCTAAA  150

seq1  AAGGTTTGATAGTAATTGGAATTGTGTTTCTTCAAAGTTCACATTTTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGATAGTAATTGGAATTGTGTTTCTTCAAAGTTCACATTTTAGA  200

seq1  GGACTCATCTAGCAGAATTGATATCTGTGATCGCTATTTTTCCTTGTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCATCTAGCAGAATTGATATCTGTGATCGCTATTTTTCCTTGTTAA  250

seq1  CTTGACTACCACTGGAATTAACTAAAACCTCAGAAGGAACTTTGTTCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTACCACTGGAATTAACTAAAACCTCAGAAGGAACTTTGTTCATG  300

seq1  ATGCCTTGTGACCTCAGATTTTCAGCCTGCAGAACTATTGGAAGTAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTGTGACCTCAGATTTTCAGCCTGCAGAACTATTGGAAGTAAATT  350

seq1  TTTATTGTAAAAAGCATCCATCTGTCTCTGGTACTGTTATGATAGCCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTAAAAAGCATCCATCTGTCTCTGGTACTGTTATGATAGCCTTG  400

seq1  GGAGACTAACATGGCATGGCAGAGAGACTTTCTGAACGTAAACTGAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTAACATGGCATGGCAGAGAGACTTTCTGAACGTAAACTGAAGGT  450

seq1  GTCCAGGGTATCAGCCATCGAGAGAGCACATCTCAATGAGCTGATGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGGTATCAGCCATCGAGAGAGCACATCTCAATGAGCTGATGAGCT  500

seq1  AAGAGCTGCAGCTTCCTACCTGCACACTAGGGGAGGGTTTAGAACATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTGCAGCTTCCTACCTGCACACTAGGGGAGGGTTTAGAACATAAA  550

seq1  ACCCTATTTGCTCAGAAACAAGGTGGGATTTTCAATTCTATTTCTGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATTTGCTCAGAAACAAGGTGGGATTTTCAATTCTATTTCTGAAGT  600

seq1  AGTGAATATAACCAGTAAATGTATTTTTCCTTAAAAATCTCATTCTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATATAACCAGTAAATGTATTTTTCCTTAAAAATCTCATTCTGAAA  650

seq1  TGATGCTTTTTAATATAATTGATATATCTTATAATCAAGGAGACCAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTTTTTAATATAATTGATATATCTTATAATCAAGGAGACCAAGTA  700

seq1  CATTGCAGTGTATACTACTAAGCACTTCACATACTCCAATAACCTAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAGTGTATACTACTAAGCACTTCACATACTCCAATAACCTAGAAG  750

seq1  TGGGGTGCTATTTGTGGACTGTTGGGGCCCACCTGTGCCAGTTCATAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGCTATTTGTGGACTGTTGGGGCCCACCTGTGCCAGTTCATAAAA  800

seq1  GCTAATTGTGCTCATTTTTACTCCAGTCCAGCTACATCTTGAGGTTAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTGTGCTCATTTTTACTCCAGTCCAGCTACATCTTGAGGTTAGCA  850

seq1  CAGCTGGGTATTACATCATTGAAAGTGTTAGTTACCAACCAACCTATAGC  900
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGGTA-TACATCATTGAAAGTGTTAGTTACCAACCAACCTATAGC  899

seq1  CAGACTAGGCAACATGGCCATGCCTTCCACATAAAAGAGGCTAAAGAGAT  950
      |||||||||| ||||||||||||||| ||||| |||||||||||||||||
seq2  CAGACTAGGC-ACATGGCCATGCCTTTCACAT-AAAGAGGCTAAAGAGAT  947

seq1  GATTACAGTCCTTTAATCCCAGAACTTGGGAGCCAGAGGAAGGTTGATTT  1000
      ||||||||||  || || ||||||||||||||||||||  | ||||||||
seq2  GATTACAGTC--TTTATTCCAGAACTTGGGAGCCAGAG--ACGTTGATTT  993

seq1  -GAGTCTGAGGCCAACCTGGTCCAGAGAGCTATTTCCAGGGTAGCCTAGG  1049
       |||||||| |||||||||||||||||||||||||||| |||||||||| 
seq2  GGAGTCTGA-GCCAACCTGGTCCAGAGAGCTATTTCCA-GGTAGCCTAG-  1040

seq1  CAACAAAGATAAACCCTGTCTCAAAAAAGAAAAAGAAAAAAATCAGGGGT  1099
        ||||||| | || |||| ||  |||||||    || ||||||   |||
seq2  -CACAAAGA-ATACTCTGT-TCTCAAAAGAA----AAGAAAATC-CAGGT  1082

seq1  GGGGGGAGGCTCAACAGTTTGCTCTCATTAGTACA-AAGCCTTGATC  1145
      ||||||| ||||||    |||||||| |||||| | | |||||||||
seq2  GGGGGGA-GCTCAA---GTTGCTCTC-TTAGTATACAGGCCTTGATC  1124