BAC Information

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BAC

Clone NameB6Ng01-121M04
Chromosome14 (Build37)
Map Location 14,804,160 - 14,805,047
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042022, LOC100042026, EG328354, Synpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7
Downstream geneAtxn7, Psmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121M04.g
ACCDH925364
length910
definitionDH925364|Mus musculus domesticus DNA, BAC clone: B6Ng01-121M04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctagaatactcaaatttctttatgactgcctggccacttgtgcc
acgttacgacagtgtaaaatatggagagactcccaggtaatttctgttga
tatctagctcaaatccaactggtttgctaataggaaaaactccaaaaagg
aacacatatcgggcttctgtgatatttggacctacctctttttagcaaaa
acatagttggaatctgcccagaactgctgaagaggcaggctgagttaggc
tcccttgtgttttctcagcctgctcatcctttgccctggtgctggaaatt
ttgcggcacattgaaagggagctgaaggaaggtgtgagcagctggatagc
aatgcaaggaggtttgtcctcctgcctgccttagctggtgtaaaggagct
tctctggtggaagaaactcaccaagggaactgccacttatattaaactcc
cggacaggggcccttcagaagggagctatagtactgggggagtcagcctg
ggctaggaaatggaagcaccagaccacacggagaagagaaagccactctc
ctgctggcccttcttgccttctttgatctccttctccttcctgttggcca
ggccctcctgtagcttgacagcaagtgacccacggataggctttgaaagt
catcttcttgcagtacagaggaggtccacagtggtggagactgggctggg
cttactcattatcttcatcagtttacctcaagtcttccttaaggaagctt
gttaacatgcatagaaacatacagtatgtaatctgtagagtatctgttga
ttaggctcaattccattcttaaatataaatgtaatagtccaaactgcttt
ttaaagacagttattgcattttacatttaatgtgtgtgtgtgtgtgtgtg
tgtgtgtgtg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14804160_14805047
seq2: B6Ng01-121M04.g_92_973

seq1  TGACTGCCAGGTTACTTGTGCCACATTACAGCAAGGTAAAATATGGAGAG  50
      |||||||| ||  ||||||||||| ||||  ||  |||||||||||||||
seq2  TGACTGCCTGGCCACTTGTGCCACGTTACGACAGTGTAAAATATGGAGAG  50

seq1  ACTCCCAGGTAATTTCATTTAATATCTAGCTCAAATCCAGCTGGTTTGCT  100
      ||||||||||||||||  || |||||||||||||||||| ||||||||||
seq2  ACTCCCAGGTAATTTCTGTTGATATCTAGCTCAAATCCAACTGGTTTGCT  100

seq1  AAGAGGAAAAGCTCCGAGAAGGAACTCATAGCGGGCTTCTGTGTAAGTTG  150
      || ||||||| |||| | ||||||| |||| ||||||||||||  | |||
seq2  AATAGGAAAAACTCCAAAAAGGAACACATATCGGGCTTCTGTGATATTTG  150

seq1  GACCTACCTCGCTTTTGCAGAAGCAGAGTTGGAATCTGCCCAGAACTGCT  200
      ||||||||||  ||| ||| || || ||||||||||||||||||||||||
seq2  GACCTACCTCTTTTTAGCAAAAACATAGTTGGAATCTGCCCAGAACTGCT  200

seq1  GAAGAGGCAGGCTGAGTTAGGCTCAGCAGCGTTTTCTCAGCCTGCTCATC  250
      ||||||||||||||||||||||||    | ||||||||||||||||||||
seq2  GAAGAGGCAGGCTGAGTTAGGCTCCCTTGTGTTTTCTCAGCCTGCTCATC  250

seq1  CTTTGCCCTGGTGCTGGAGATTTTGTGGCACATTGAAAGGGAGCAGGAAG  300
      |||||||||||||||||| |||||| ||||||||||||||||||  ||||
seq2  CTTTGCCCTGGTGCTGGAAATTTTGCGGCACATTGAAAGGGAGC-TGAAG  299

seq1  GAAGGTAGTGAGCAGCTGGATAGCAATGCAAGGAGGTTTGGCCTCCTGCC  350
      |||||| ||||||||||||||||||||||||||||||||| |||||||||
seq2  GAAGGT-GTGAGCAGCTGGATAGCAATGCAAGGAGGTTTGTCCTCCTGCC  348

seq1  TGCCTTAGCTGGTAGAAAGGGGCTTCTCGGGTGGAAGAAACTCACAAAGG  400
      |||||||||||||  ||||| ||||||| |||||||||||||||| ||||
seq2  TGCCTTAGCTGGTGTAAAGGAGCTTCTCTGGTGGAAGAAACTCACCAAGG  398

seq1  GAAGTGCCACTTAGATTAAGCTCCCGGACAGGGGCCCTTCAGAAGGGAGC  450
      ||| ||||||||| ||||| ||||||||||||||||||||||||||||||
seq2  GAACTGCCACTTATATTAAACTCCCGGACAGGGGCCCTTCAGAAGGGAGC  448

seq1  TATAGTACTGGGGGAGTCAGCCTGGGCTAGGAAATGGAAGCACCAGAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATAGTACTGGGGGAGTCAGCCTGGGCTAGGAAATGGAAGCACCAGACCA  498

seq1  CAGGGAGAAGAGAAGGCCACTCTCCTGCTGGCCCTTCTTGCCTTCTTTGA  550
      || ||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CACGGAGAAGAGAAAGCCACTCTCCTGCTGGCCCTTCTTGCCTTCTTTGA  548

seq1  TCTCCTTCTCCTTCCTGTTGGCCAGGCCCTCCTGTAGCTTGACAGCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCTCCTTCCTGTTGGCCAGGCCCTCCTGTAGCTTGACAGCAAGT  598

seq1  AACCCAGGGATAGGCTTTGGAAGTCAGCTTCTTGCAGTACAGAGGAGGTC  650
       ||||| |||||||||||| |||||| |||||||||||||||||||||||
seq2  GACCCACGGATAGGCTTTGAAAGTCATCTTCTTGCAGTACAGAGGAGGTC  648

seq1  CACAGTGGTGGAGACTGGGCTGGGCTTAGTCATTATCTTCATCAGTTTAC  700
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CACAGTGGTGGAGACTGGGCTGGGCTTACTCATTATCTTCATCAGTTTAC  698

seq1  CTCAAAGTCTTCCTTAAGGAAGCTTGTTAAACATGCATAGAAACATAGAG  750
      ||| |||||||||||||||||||||||| |||||||||||||||||| ||
seq2  CTC-AAGTCTTCCTTAAGGAAGCTTGTT-AACATGCATAGAAACATACAG  746

seq1  TATGTAATCTGTAGAGTAATCTGTTGATTAGGCTCAATTCCATTCTTAAA  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TATGTAATCTGTAGAGT-ATCTGTTGATTAGGCTCAATTCCATTCTTAAA  795

seq1  TATAAATGTAAATAGTCCAAACTGCTTTTTAAAGACAGTTATTGCATTTT  850
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGT-AATAGTCCAAACTGCTTTTTAAAGACAGTTATTGCATTTT  844

seq1  ACATTTAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  888
      ||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  882