BAC Information

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BAC

Clone NameB6Ng01-121M20
Chromosome14 (Build37)
Map Location 81,928,546 - 81,929,676
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121M20.bB6Ng01-121M20.g
ACCDH925392DH925393
length1,1221,150
definitionDH925392|Mus musculus domesticus DNA, BAC clone: B6Ng01-121M20, 5' end.DH925393|Mus musculus domesticus DNA, BAC clone: B6Ng01-121M20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctgaaagcaatcccactaaa
atcaggtactagacaaggctgcccattttcgccctacctcttcaacgtag
tacttgaagtcctagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagatgaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaaggacaaacaggctgagaaaaaaattag
ggaaacaacatccttctcaatagtcacaaataatataaaacatcttggtg
tgactctaattaaggaagtgaaagatctgtatgagaagaacttcaagtct
catttttaactctttaatatgcagataaggaaataatgctcaggacctaa
gaaagagaaataatgcacttttaaattaaatgattggtttgattttacaa
attaattctcttttcatcttcagctggtaaagatgaaatgtttggacttc
tgtactgtgaccactttggaacagagcagtaaatggtatgtggtatgtag
tgtgtgaaaattctctttgtattgaatgtgtgacacacatatgtgtgagt
gaagtgattttgtcttcatatgatgatggcatgaatatgtatgtatgttt
gtacatatatgtgtctgtgttcatgcatatgagcatgtcaccatttttaa
cctcatatcttcactaaagattttccacactctcagttttccatcctcac
agcagttgacatcttacatctggcatactctctgttcttaatagatcccc
cagtacttgcaaaatgtccacctgtcgctttggcatggaaaagatttctg
atttcttgtcttcctttattgtttgtatctagatttttttttaggagata
atcaaattagaagaaatgatgtaaatttcttgaaggtaataaaccatcta
taaaaataaggactttaaaaga
gaattctcacccgaggaatactgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacatcagtcagaatggctaagatcaaaaattcagatgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
gcattgcaagcttgtacaaccactctggaaatcagtctggtggttcctcc
aaaaattggacatagtactatcagaggatcccacaatacctctcttgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccctatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacaaaaaagtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgaaatgtactcactgataagtggatattaacccagaaact
tagtatagcgagatataaggtacaatatgtataaacatatgaaactgaag
aagaacgaagaccaaagtgtggacactttgctcattcttagaattggaaa
caatcacccatggaaggagttacatagacaaagtttggagctgagacaaa
agaatggtccatctagagactgccatatccaggatccatcccataattag
cctcgaagcgatgacaccattgcatacactagcaagcctttgttgcaagg
acgtgatatagctgtcccttgtgagactagaccgggtctaccaaacgcag
aagtggatgctcacagtcactattggatggatcacagggccccaatgtga
gctagagaaagtatcagagctaagaagatctgcatcctattcagaggaac
acataatgaactatcagtacccagagctctggactctagctgtatatgta
accaagatgactaggtggcatcacttgaagaagtcatgtcagcaacgtat
gcctagtacaggtaaatccagtcaaaaatggaatagtgtggctggtgggt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81928546_81929676
seq2: B6Ng01-121M20.b_50_1170

seq1  AATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCAG  50

seq1  TAGCCAACATCAAAGTAAATGGTGAGAAGCTGAAAGCAATCCCACTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAACATCAAAGTAAATGGTGAGAAGCTGAAAGCAATCCCACTAAAA  100

seq1  TCAGGTACTAGACAAGGCTGCCCATTTTCGCCCTACCTCTTCAACGTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTACTAGACAAGGCTGCCCATTTTCGCCCTACCTCTTCAACGTAGT  150

seq1  ACTTGAAGTCCTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGTCCTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGA  200

seq1  TACAAATTGGAAAAGATGAAGTCAAAATATCACTTTTTGCAGATGATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTGGAAAAGATGAAGTCAAAATATCACTTTTTGCAGATGATATG  250

seq1  ATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCT  300

seq1  GATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATTAACTCAAACAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATTAACTCAAACAAGT  350

seq1  CAATGGCCTTTCTCTACACAAAGGACAAACAGGCTGAGAAAAAAATTAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCCTTTCTCTACACAAAGGACAAACAGGCTGAGAAAAAAATTAGG  400

seq1  GAAACAACATCCTTCTCAATAGTCACAAATAATATAAAACATCTTGGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAACATCCTTCTCAATAGTCACAAATAATATAAAACATCTTGGTGT  450

seq1  GACTCTAATTAAGGAAGTGAAAGATCTGTATGAGAAGAACTTCAAGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTAATTAAGGAAGTGAAAGATCTGTATGAGAAGAACTTCAAGTCTC  500

seq1  ATTTTTAACTCTTTAATATGCAGATAAGGAAATAATGCTCAGGACCTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAACTCTTTAATATGCAGATAAGGAAATAATGCTCAGGACCTAAG  550

seq1  AAAGAGAAATAATGCACTTTTAAATTAAATGATTGGTTTGATTTTACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAATAATGCACTTTTAAATTAAATGATTGGTTTGATTTTACAAA  600

seq1  TTAATTCTCTTTTCATCTTCAGCTGGTAAAGATGAAATGTTTGGACTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCTCTTTTCATCTTCAGCTGGTAAAGATGAAATGTTTGGACTTCT  650

seq1  GTACTGTGACCACTTTGGAACAGAGCAGTAAATGGTATGTGGTATGTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTGACCACTTTGGAACAGAGCAGTAAATGGTATGTGGTATGTAGT  700

seq1  GTGTGAAAATTCTCTTTGTATTGAATGTGTGACACACATATGTGTGAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAAATTCTCTTTGTATTGAATGTGTGACACACATATGTGTGAGTG  750

seq1  AAGTGATTTTGTCTTCATATGATGATGGCATGAATATGTATGTATGTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATTTTGTCTTCATATGATGATGGCATGAATATGTATGTATGTTTG  800

seq1  TACATATATGTGTCTGTGTTCATGCATATGAGCATGTCACCATTTTTAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATATGTGTCTGTGTTCATGCATATGAGCATGTCACCATTTTTAAC  850

seq1  CTCATATCTTCACTAAAGATTTTCCACACTCTCAGTTTTCCATCCTCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATCTTCACTAAAGATTTTCCACACTCTCAGTTTTCCATCCTCACA  900

seq1  GCAGTTGACATCTTACATCTGGCATACTCTCTGTTCTTAATAGATCCCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTGACATCTTACATCTGGCATACTCTCTGTTCTTAATAGATCCCCC  950

seq1  AGGTACTTGCAAAATGTCCACCTGTCGCTTTGGCATGGAAAAGAATTTCT  1000
      | ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  A-GTACTTGCAAAATGTCCACCTGTCGCTTTGGCATGGAAAAG-ATTTCT  998

seq1  GATTTCTTTGTCTTCCTTTATTGTTTTGTATCTAGATTTTTTTTTAGGAG  1050
      |||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  GATTTC-TTGTCTTCCTTTATTG-TTTGTATCTAGATTTTTTTTTAGGAG  1046

seq1  AATAAATCAAATTAGAGAAAATGATGTAAATATCTTGAAGTAAATTAAAC  1100
      |   ||||||||||||  ||||||||||||| ||||||||  || |||||
seq2  A--TAATCAAATTAGAAGAAATGATGTAAATTTCTTGAAGGTAA-TAAAC  1093

seq1  CATCTTTATAAAAATAAAGACTTTATAAAGA  1131
      ||||  ||||||||||| ||||||| |||||
seq2  CATC--TATAAAAATAAGGACTTTA-AAAGA  1121