BAC Information

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BAC

Clone NameB6Ng01-121N19
Chromosome14 (Build37)
Map Location 97,846,660 - 97,974,251
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1, LOC635593
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121N19.bB6Ng01-121N19.g
ACCDH925436DH925437
length1,124996
definitionDH925436|Mus musculus domesticus DNA, BAC clone: B6Ng01-121N19, 5' end.DH925437|Mus musculus domesticus DNA, BAC clone: B6Ng01-121N19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,846,660 - 97,847,793)(97,973,252 - 97,974,251)
sequence
gaattctcttaataattaatgttaaaattatcaaccatgacaaatattta
tcatatattggtcaatgaacaaattaagatacatataataatgtaaagtt
taataatatgatgttttcataaaaataaattaaggtacatttagataaat
gattcaaataaaattatcatgttaataaaccagtgaggcacttgtggttt
tcagactttttgtctgataagaaaaatgtcattttgtgaatatgaataaa
tcagttttaaaattctgccatttgtgttcctcacagaaacagaatcaata
ggatacacatacaatcaaaaatgtcaatagtacctgtacacatgtagtgt
gtgaacttgcctagagagatatgaattaaagggctcttcacatcagacag
gtattctgggacagaataaaaaaaaaatccttccaaagtcaagttagtga
ggctgtgagttcactgtgactccttacaggattatgggccaaaggcagtt
atatcactacagaattctatttgtcaatacagttcagagttaaccatctc
tagtttaaatatgacatgtacagtagtcatccttccatatcctgaaccaa
aggaagtcagagatggtctaatcaagagtggcaagcttcaggaaggtcag
agttaagagcaaatttgtgggactcacaagtctgggtcatgagagggcga
cttatgacaggaaaataagcacatttaaagagagtgtaagaaatgagata
atagtgttttcaaaagcattgccaaatctcacaatgatacattttcatga
agcaggatatagagtatgatggtggacattcagagtgttcacagtgaggc
atgttatcctgaaaaagaaattcagaaaaattcagcactgggaatcagaa
aacagatgcctcggagatagggaaaaataggttcagattaaatggaatag
gaatgtatgagccacccataaaagcttgaatttagggacagaattgactc
aaagattatgaaccacccctcaaactcaaagaagctctaaagtcatagca
agattcctaaacatattattcattttagtcattcaatgctattgctttga
aaaccaagaatcactgagcagaga
gaattctgaacgagcatttttgctgtctttggagtcttaggaaaacacat
tcacctttacaaagacaaacatgacaatagatgagggggaaatacacagg
aagacttagaggaagaagaaggaaaggagaatgatgtacttctattataa
tcacaaaataaaagaaataactaaaataataagtaactttgaataagaat
taaaaattttaaagtctttgtgaatgcaacattctgtcagagactaaatc
atacctgacaatcagctcttatccatcttatagtgtgctgtattaaattt
gttgatattttgttaagatgttttatttccaagcacatgaacaataaata
ctcttaactgaaatattgttttagattttatttttagagtgtttacttac
ttattactagtttatcacaatattatttttagatttgacattcaatatac
agagaccacttaattatgttggaagcattttctttacaataaatattaaa
aacaacgtttacttcttcgaatatttgatacaattccaaaattataacat
aattttaaaagaatcaagaaggaaataaaaaagactcttgttctgtttaa
taacaatagttaccttagtagaaaaattctttgaaactagttagtggatt
tgattattttgaaaatgtaattggcaagtcttggttaatagatttggaat
gacaaaaagatattattgcttttgtttcattattcaaatgagaagcatca
gaaatatgtaagtatatctgccaacacacataaatatggatttttttttc
ctgtggatcttagcatattgtctgtagagatatggacttcagtaggttgg
aaactctgttaacatcctttattcaatgtttcttggtaaagtcataatca
aaaaggggagagaaaatgagatatcaagcatttagaaaagtggatgactt
ttttgatggatgtagagtaataataatttatagtgtggtactttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97846660_97847793
seq2: B6Ng01-121N19.b_47_1170

seq1  GAATTCTCTTAATAATTAATGTTAAAATTATCAACCATGACAAATATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAATAATTAATGTTAAAATTATCAACCATGACAAATATTTA  50

seq1  TCATATATTGGTCAATGAACAAATTAAGATACATATAATAATGTAAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATTGGTCAATGAACAAATTAAGATACATATAATAATGTAAAGTT  100

seq1  TAATAATATGATGTTTTCATAAAAATAAATTAAGGTACATTTAGATAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATATGATGTTTTCATAAAAATAAATTAAGGTACATTTAGATAAAT  150

seq1  GATTCAAATAAAATTATCATGTTAATAAACCAGTGAGGCACTTGTGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAATAAAATTATCATGTTAATAAACCAGTGAGGCACTTGTGGTTT  200

seq1  TCAGACTTTTTGTCTGATAAGAAAAATGTCATTTTGTGAATATGAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTTTTTGTCTGATAAGAAAAATGTCATTTTGTGAATATGAATAAA  250

seq1  TCAGTTTTAAAATTCTGCCATTTGTGTTCCTCACAGAAACAGAATCAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTAAAATTCTGCCATTTGTGTTCCTCACAGAAACAGAATCAATA  300

seq1  GGATACACATACAATCAAAAATGTCAATAGTACCTGTACACATGTAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACACATACAATCAAAAATGTCAATAGTACCTGTACACATGTAGTGT  350

seq1  GTGAACTTGCCTAGAGAGATATGAATTAAAGGGCTCTTCACATCAGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTTGCCTAGAGAGATATGAATTAAAGGGCTCTTCACATCAGACAG  400

seq1  GTATTCTGGGACAGAATAAAAAAAAAATCCTTCCAAAGTCAAGTTAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTGGGACAGAATAAAAAAAAAATCCTTCCAAAGTCAAGTTAGTGA  450

seq1  GGCTGTGAGTTCACTGTGACTCCTTACAGGATTATGGGCCAAAGGCAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGAGTTCACTGTGACTCCTTACAGGATTATGGGCCAAAGGCAGTT  500

seq1  ATATCACTACAGAATTCTATTTGTCAATACAGTTCAGAGTTAACCATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACTACAGAATTCTATTTGTCAATACAGTTCAGAGTTAACCATCTC  550

seq1  TAGTTTAAATATGACATGTACAGTAGTCATCCTTCCATATCCTGAACCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAAATATGACATGTACAGTAGTCATCCTTCCATATCCTGAACCAA  600

seq1  AGGAAGTCAGAGATGGTCTAATCAAGAGTGGCAAGCTTCAGGAAGGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTCAGAGATGGTCTAATCAAGAGTGGCAAGCTTCAGGAAGGTCAG  650

seq1  AGTTAAGAGCAAATTTGTGGGACTCACAAGTCTGGGTCATGAGAGGGCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGAGCAAATTTGTGGGACTCACAAGTCTGGGTCATGAGAGGGCGA  700

seq1  CTTATGACAGGAAAATAAGCACATTTAAAGAGAGTGTAAGAAATGAGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGACAGGAAAATAAGCACATTTAAAGAGAGTGTAAGAAATGAGATA  750

seq1  ATAGTGTTTTCAAAAGCATTGCCAAATCTCACAATGATACATTTTCATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTTTTCAAAAGCATTGCCAAATCTCACAATGATACATTTTCATGA  800

seq1  AGCAGGATATAGAGTATGATGGTGGACATTCAGAGTGTTCACAGTGAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGATATAGAGTATGATGGTGGACATTCAGAGTGTTCACAGTGAGGC  850

seq1  ATGTTATCCTGAAAAAGAAATTCAGAAAAATTCAGGCACTGGGAATCAGA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGTTATCCTGAAAAAGAAATTCAGAAAAATTCA-GCACTGGGAATCAGA  899

seq1  AAACAGATGCCTCGGAGATAGGGAAAAATAGGTTCAGATTAAATGGAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATGCCTCGGAGATAGGGAAAAATAGGTTCAGATTAAATGGAATA  949

seq1  GGAATGTAATGAGCCACCCATTAAAAGCTTGAATTTAGGGACAGAATTGA  1000
      ||||||| |||||||||||| |||||||||||||||||||||||||||||
seq2  GGAATGT-ATGAGCCACCCA-TAAAAGCTTGAATTTAGGGACAGAATTGA  997

seq1  CTCAAAAGAATTATGAACCCACCCCTCAAACTCAAAGAAGGCTCTAAAGT  1050
      ||||||   |||||||| ||||||||||||||||||||| ||||||||||
seq2  CTCAAA--GATTATGAA-CCACCCCTCAAACTCAAAGAA-GCTCTAAAGT  1043

seq1  CATAAGCAAGATTCCTAAACATA-TATTCATTTTTAGTCATTTCAATGCT  1099
      ||| ||||||||||||||||||| |||||| ||||||||| |||||||||
seq2  CAT-AGCAAGATTCCTAAACATATTATTCA-TTTTAGTCA-TTCAATGCT  1090

seq1  ATTGCTTTGAAAAACAAAGATCACTGAGCCAGAGA  1134
      ||||||||||||| |||  ||||||||| ||||||
seq2  ATTGCTTTGAAAACCAAGAATCACTGAG-CAGAGA  1124

seq1: chr14_97973252_97974251
seq2: B6Ng01-121N19.g_69_1064 (reverse)

seq1  TTAAAGTACCACACCTAATAAAATTATTATTACTCTACATCCATCAAAAA  50
      ||||||||||||| |||   ||||||||||||||||||||||||||||||
seq2  TTAAAGTACCACA-CTA--TAAATTATTATTACTCTACATCCATCAAAAA  47

seq1  AGTCATCCACTTTTCTAAATGCTTGATTATCTTCATTTTCTCTCCCTTCT  100
      |||||||||||||||||||||||||| |||| |||||||||||||| | |
seq2  AGTCATCCACTTTTCTAAATGCTTGA-TATC-TCATTTTCTCTCCCCTTT  95

seq1  TTGA-TATGACTTTACCAAGAAACATTGAATAAAGGATGTTAACAGAGTT  149
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTATGACTTTACCAAGAAACATTGAATAAAGGATGTTAACAGAGTT  145

seq1  TCCAACCTACTGAAGTCCATATCTCTACAGACAATATGCTAAGATCCACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCTACTGAAGTCCATATCTCTACAGACAATATGCTAAGATCCACA  195

seq1  GGAAAAAAAAATCCATATTTATGTGTGTTGGCAGATATACTTACATATTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAAATCCATATTTATGTGTGTTGGCAGATATACTTACATATTT  245

seq1  CTGATGCTTCTCATTTGAATAATGAAACAAAAGCAATAATATCTTTTTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCTTCTCATTTGAATAATGAAACAAAAGCAATAATATCTTTTTGT  295

seq1  CATTCCAAATCTATTAACCAAGACTTGCCAATTACATTTTCAAAATAATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAAATCTATTAACCAAGACTTGCCAATTACATTTTCAAAATAATC  345

seq1  AAATCCACTAACTAGTTTCAAAGAATTTTTCTACTAAGGTAACTATTGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACTAACTAGTTTCAAAGAATTTTTCTACTAAGGTAACTATTGTT  395

seq1  ATTAAACAGAACAAGAGTCTTTTTTATTTCCTTCTTGATTCTTTTAAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACAGAACAAGAGTCTTTTTTATTTCCTTCTTGATTCTTTTAAAAT  445

seq1  TATGTTATAATTTTGGAATTGTATCAAATATTCGAAGAAGTAAACGTTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTATAATTTTGGAATTGTATCAAATATTCGAAGAAGTAAACGTTGT  495

seq1  TTTTAATATTTATTGTAAAGAAAATGCTTCCAACATAATTAAGTGGTCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATATTTATTGTAAAGAAAATGCTTCCAACATAATTAAGTGGTCTC  545

seq1  TGTATATTGAATGTCAAATCTAAAAATAATATTGTGATAAACTAGTAATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTGAATGTCAAATCTAAAAATAATATTGTGATAAACTAGTAATA  595

seq1  AGTAAGTAAACACTCTAAAAATAAAATCTAAAACAATATTTCAGTTAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGTAAACACTCTAAAAATAAAATCTAAAACAATATTTCAGTTAAGA  645

seq1  GTATTTATTGTTCATGTGCTTGGAAATAAAACATCTTAACAAAATATCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATTGTTCATGTGCTTGGAAATAAAACATCTTAACAAAATATCAA  695

seq1  CAAATTTAATACAGCACACTATAAGATGGATAAGAGCTGATTGTCAGGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTAATACAGCACACTATAAGATGGATAAGAGCTGATTGTCAGGTA  745

seq1  TGATTTAGTCTCTGACAGAATGTTGCATTCACAAAGACTTTAAAATTTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTAGTCTCTGACAGAATGTTGCATTCACAAAGACTTTAAAATTTTT  795

seq1  AATTCTTATTCAAAGTTACTTATTATTTTAGTTATTTCTTTTATTTTGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTATTCAAAGTTACTTATTATTTTAGTTATTTCTTTTATTTTGTG  845

seq1  ATTATAATAGAAGTACATCATTCTCCTTTCCTTCTTCTTCCTCTAAGTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAATAGAAGTACATCATTCTCCTTTCCTTCTTCTTCCTCTAAGTCT  895

seq1  TCCTGTGTATTTCCCCCTCATCTATTGTCATGTTTGTCTTTGTAAAGGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTATTTCCCCCTCATCTATTGTCATGTTTGTCTTTGTAAAGGTG  945

seq1  AATGTGTTTTCCTAAGACTCCAAAGACAGCAAAAATGCTCGTTCAGAATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTTTCCTAAGACTCCAAAGACAGCAAAAATGCTCGTTCAGAATT  995

seq1  C  1000
      |
seq2  C  996