BAC Information

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BAC

Clone NameB6Ng01-121O01
Chromosome14 (Build37)
Map Location 53,008,333 - 53,009,475
singlet/doubletsinglet
Overlap genenone
Upstream geneEG638695, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512
Downstream geneOlfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202, LOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601, LOC100043282, A130082M07Rik, LOC100042607, LOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121O01.bB6Ng01-121O01.g
ACCDH925448DH925449
length1,136694
definitionDH925448|Mus musculus domesticus DNA, BAC clone: B6Ng01-121O01, 5' end.DH925449|Mus musculus domesticus DNA, BAC clone: B6Ng01-121O01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgctaaaaagtctacctttgtcttaataagtagaaagccagt
gactattcagaagaagaaagatggaagttctttcagaaaagagcttctgg
tcgtgctatggtgaaggatgggatgacaatgagcccgagggacattcctg
gggcagtgtggactgagcttggtgaattactgcatggggaagaggaagac
agtgggtggatacacaaatgctctaaagagatctcaagtgaatgccagag
aggacacatctgccttgacttgtacaattgaccctgaattctgagagctt
gggagttagattgtagcgaatagacagcaggaaatggagtcctatggcat
tgttttcctcaaacccggttagatattcatgctttgccatttacattagt
gtaagatatgtgtttttctgaggaatgtgtcagaaacatgtataatattt
gggcaaattattgagatttttatagatcatcagatgcatttatattagta
gagttgtattctgtaatagacttttggctattttgtgggctctttcttcc
atctttctgtaccccttttctttcacccttttaaacctctaaaactaaat
aggagagaaaaatgatagaggggaaagggggcagcgatagtgttagacta
cttcctgcttattaggtgtgtggggtttctcgggggcaagtttgatcttt
gctgtcaggatatctaatttcttcttttcttctcttcacacacttgacaa
acctcaaccaacctcaaccaactgcaaccaacagtgtccaaccaccaaac
tgcttacagttccccaactcttagggcccctagcatttatatatcctctg
gaagtcctcaggattccatatgtcacacactcacagaaactatctgcagc
tggcaaaaatgcccctgctagagcatgaagccgatcacagtcagctgctg
tggacagtctgaagcagccccttatcccacagatgagattagatgaaaag
acattattatatttctgtgtttaaaaaaaaaccaaaatctcactacagta
ctcagtcatcttaaaatattatcaatgattaatattttgtcacatgaaca
gtacctgaaaacacagcatggatgatgatgtggtgt
gaattctgtttagttctccagtccattttcataattatgttattggtttt
ctttatgaccagttttttagttcattatatattttggatattgatccttt
attggatgtgtaattgataaagttcttttttcattctataggctggtact
ttgaatgatagctgtcctctgccatacagaaattgttcactttcatgagg
tccaatttattaattattagtgtctgtattatcagtgtctgttcagaaag
tcttttcctgaaccaatgagtctgagactattccactttctctttcaggt
tcagtgtatctgttcttatgttgaagtcattgatgatcaatttgaaattc
agttttgtactataatatatatatatatatatataattttgtatatatat
ataattttgtatatatatataattttgtatatatatataattttgtatag
aatagtatagatctatttagcatcctccatgtgcagtcatatagtttata
tatttcatatattgaccctttattgtatgtgtgattggtagaggtctttt
tccattgtgaaagttttctactttgtctgaatgacagttgtcctttgcca
tacattttgttcactttcatgaggaccaaccatcaacattgttgaaggta
ttatctttttttcagtgtgtttgtctgccttcttatcaaaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_53008333_53009475
seq2: B6Ng01-121O01.b_48_1183

seq1  GAATTCCATGCTAAAAAGTCTACCTTTGTCTTAATAAGTAGAAAGCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCTAAAAAGTCTACCTTTGTCTTAATAAGTAGAAAGCCAGT  50

seq1  GACTATTCAGAAGAAGAAAGATGGAAGTTCTTTCAGAAAAGAGCTTCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTCAGAAGAAGAAAGATGGAAGTTCTTTCAGAAAAGAGCTTCTGG  100

seq1  TCGTGCTATGGTGAAGGATGGGATGACAATGAGCCCGAGGGACATTCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGCTATGGTGAAGGATGGGATGACAATGAGCCCGAGGGACATTCCTG  150

seq1  GGGCAGTGTGGACTGAGCTTGGTGAATTACTGCATGGGGAAGAGGAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGTGTGGACTGAGCTTGGTGAATTACTGCATGGGGAAGAGGAAGAC  200

seq1  AGTGGGTGGATACACAAATGCTCTAAAGAGATCTCAAGTGAATGCCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGGATACACAAATGCTCTAAAGAGATCTCAAGTGAATGCCAGAG  250

seq1  AGGACACATCTGCCTTGACTTGTACAATTGACCCTGAATTCTGAGAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACATCTGCCTTGACTTGTACAATTGACCCTGAATTCTGAGAGCTT  300

seq1  GGGAGTTAGATTGTAGCGAATAGACAGCAGGAAATGGAGTCCTATGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTAGATTGTAGCGAATAGACAGCAGGAAATGGAGTCCTATGGCAT  350

seq1  TGTTTTCCTCAAACCCGGTTAGATATTCATGCTTTGCCATTTACATTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCCTCAAACCCGGTTAGATATTCATGCTTTGCCATTTACATTAGT  400

seq1  GTAAGATATGTGTTTTTCTGAGGAATGTGTCAGAAACATGTATAATATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGATATGTGTTTTTCTGAGGAATGTGTCAGAAACATGTATAATATTT  450

seq1  GGGCAAATTATTGAGATTTTTATAGATCATCAGATGCATTTATATTAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAATTATTGAGATTTTTATAGATCATCAGATGCATTTATATTAGTA  500

seq1  GAGTTGTATTCTGTAATAGACTTTTGGCTATTTTGTGGGCTCTTTCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTATTCTGTAATAGACTTTTGGCTATTTTGTGGGCTCTTTCTTCC  550

seq1  ATCTTTCTGTACCCCTTTTCTTTCACCCTTTTAAACCTCTAAAACTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTGTACCCCTTTTCTTTCACCCTTTTAAACCTCTAAAACTAAAT  600

seq1  AGGAGAGAAAAATGATAGAGGGGAAAGGGGGCAGCGATAGTGTTAGACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAAAAATGATAGAGGGGAAAGGGGGCAGCGATAGTGTTAGACTA  650

seq1  CTTCCTGCTTATTAGGTGTGTGGGGTTTCTCGGGGGCAAGTTTGATCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGCTTATTAGGTGTGTGGGGTTTCTCGGGGGCAAGTTTGATCTTT  700

seq1  GCTGTCAGGATATCTAATTTCTTCTTTTCTTCTCTTCACACACTTGACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGGATATCTAATTTCTTCTTTTCTTCTCTTCACACACTTGACAA  750

seq1  ACCTCAACCAACCTCAACCAACTGCAACCAACAGTGTCCAACCACCAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAACCAACCTCAACCAACTGCAACCAACAGTGTCCAACCACCAAAC  800

seq1  TGCTTACAGTTCCCCAACTCTTAGGGCCCCTAGCATTTATATATCCTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACAGTTCCCCAACTCTTAGGGCCCCTAGCATTTATATATCCTCTG  850

seq1  GAAGTCCTCAGGATTCCATATGTCACACACTCACAGAAACTATCTGCAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCTCAGGATTCCATATGTCACACACTCACAGAAACTATCTGCAGC  900

seq1  TGGCAAAAAATGCCCCTGCTAGAGCATGAAGCCGATCACAGTCAGCTGCT  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGC-AAAAATGCCCCTGCTAGAGCATGAAGCCGATCACAGTCAGCTGCT  949

seq1  GTGGACAGTCTGAAGCAGCCCCTTATCCCACAGATGAGATTAAGATGAAA  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTGGACAGTCTGAAGCAGCCCCTTATCCCACAGATGAGATT-AGATGAAA  998

seq1  AGACATTATTATATTTCTGTGTTTAAAAAAGAAACCAAAATTCTCACTAC  1050
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  AGACATTATTATATTTCTGTGTTTAAAAAA-AAACCAAAA-TCTCACTAC  1046

seq1  AGTACTCAGTTCATCTTAAAATATTATCAATGTATTAAATATTTGTCACA  1100
      ||||||||| |||||||||||||||||||||| |||||   |||||||||
seq2  AGTACTCAG-TCATCTTAAAATATTATCAATG-ATTAATATTTTGTCACA  1094

seq1  TGAACAGTAACTGAAAACACAGCAGTGATGATGATGTGTGTGT  1143
      ||||||||| ||||||||||||||  |||||||||||| ||||
seq2  TGAACAGTACCTGAAAACACAGCATGGATGATGATGTG-GTGT  1136