BAC Information

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BAC

Clone NameB6Ng01-122F15
Chromosome14 (Build37)2 (Build37)
Map Location 96,049,987 - 96,050,639145,830,101 - 145,830,636
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043783, LOC677613, LOC100043784, LOC382931
Downstream gene4921530L21Rik, Klhl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122F15.bB6Ng01-122F15.g
ACCDH925800DH925801
length653973
definitionDH925800|Mus musculus domesticus DNA, BAC clone: B6Ng01-122F15, 5' end.DH925801|Mus musculus domesticus DNA, BAC clone: B6Ng01-122F15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(96,049,987 - 96,050,639)(145,830,101 - 145,830,636)
sequence
gaattcattcctatctcaatatgcttgaccacccatcaagttttccatgt
ccctttccagtagcctccatttctatcagaaatttggtggcctatttttt
tttcactattactgttacatacatgtatgtatacaaatatataaaccaaa
cccactgagtctgttttgttgtttatgtgtataaaattcaatggctgatc
actttgtattatattactagggtctaatttttggggaagtcaattatcct
cttggatgctgtgatatttttctactttctacattaaaatatttgctcat
attgttaatgtttaggcagccattagaaggaggtatgatcttactgtaga
cttcttgttgtttggctcctatattgtttttataccctcttaaatatttc
cctgaacttcatatggtctgtgagttgtaccatggatcttctgagctttt
tgcctaatatccacttatcagtgcatgtgttctatggtgattgatttacc
tcactcagtatgatattttctagttccatagtcatacttagacatgagaa
caaaataatcaagggaggaacagagagggagggccttggagagagagagg
agggggaaggaaaagaggagctaggatctggtgtgggaggagaaagggga
tat
gaattcttcaggatctgttatgcctcccttttcatttctgattttgttaa
ttaggattttgtccctgtgccctctagtgagtctagctaaggttttatct
atcttttgattttctcaaagaaccaactcctcttttggttaattctttga
atagttcttcttgtttctactaggttgatttcacccctgagtttgattat
ttctggccttctactcctcttgggtgaatttgcttcctttttttctagag
attttagatgtgttgttaagctgctagtgtgtgttctctccagtttcttc
ttggaggcactcagagatatgagtttacctcttagaaatgctttcagtgt
gtcccatagatttgggtatgttgaggcttcattttaattaaactctaaaa
agtctttaatttttttttattccatccttgatcaaggtatcattgagaag
agtgttattcagtttccacatgaaagttggctttccattatttatgttgt
tattgaagatcagccttagtccatggtggtctgataggatgcatgggaca
atttcaatatttttgtatatgttgaggcctgttttatgaccaattatatg
gtcaattttggagaaggtcccgtgaggtgctgagaagaaggtatattctt
ttgttttaggataaaatgttctgtagatatctgttaagtccatttgtttc
attacttttgttcgtttcactgtgtccctgtttagtgtctgtttccacga
tctgtctattgatgaaagtggtatgttgaagtctcccactattattgtgt
gaggtgcaatgtgtactttgagctttactaaggtgtctttaatgaatgtg
gctgccctttgcattgggggcataaatattcagattgagagttcctcttg
gaagatttacctttgatgagtatgagtgtctctccttgcttttttgatac
tttgggttggaagtttattttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_96049987_96050639
seq2: B6Ng01-122F15.b_49_701 (reverse)

seq1  ATATCCCCTGTCTCCTCCCACACCAGATCCTAGCTCCTCTTTTCCTTCCC  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCCTTTCTCCTCCCACACCAGATCCTAGCTCCTCTTTTCCTTCCC  50

seq1  CCTCCTCTCTCTCTCCAAGGCCCTCCCTCTCTGTTCCTCCCTTGATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTCTCTCTCCAAGGCCCTCCCTCTCTGTTCCTCCCTTGATTATT  100

seq1  TTGTTCTCATGTCTAAGTATGACTATGGAACTAGAAAATATCATACTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTCATGTCTAAGTATGACTATGGAACTAGAAAATATCATACTGAG  150

seq1  TGAGGTAAATCAATCACCATAGAACACATGCACTGATAAGTGGATATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAAATCAATCACCATAGAACACATGCACTGATAAGTGGATATTAG  200

seq1  GCAAAAAGCTCAGAAGATCCATGGTACAACTCACAGACCATATGAAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAGCTCAGAAGATCCATGGTACAACTCACAGACCATATGAAGTTC  250

seq1  AGGGAAATATTTAAGAGGGTATAAAAACAATATAGGAGCCAAACAACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATATTTAAGAGGGTATAAAAACAATATAGGAGCCAAACAACAAG  300

seq1  AAGTCTACAGTAAGATCATACCTCCTTCTAATGGCTGCCTAAACATTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTACAGTAAGATCATACCTCCTTCTAATGGCTGCCTAAACATTAAC  350

seq1  AATATGAGCAAATATTTTAATGTAGAAAGTAGAAAAATATCACAGCATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAGCAAATATTTTAATGTAGAAAGTAGAAAAATATCACAGCATCC  400

seq1  AAGAGGATAATTGACTTCCCCAAAAATTAGACCCTAGTAATATAATACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGATAATTGACTTCCCCAAAAATTAGACCCTAGTAATATAATACAA  450

seq1  AGTGATCAGCCATTGAATTTTATACACATAAACAACAAAACAGACTCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCAGCCATTGAATTTTATACACATAAACAACAAAACAGACTCAGT  500

seq1  GGGTTTGGTTTATATATTTGTATACATACATGTATGTAACAGTAATAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGGTTTATATATTTGTATACATACATGTATGTAACAGTAATAGTG  550

seq1  AAAAAAAAATAGGCCACCAAATTTCTGATAGAAATGGAGGCTACTGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAATAGGCCACCAAATTTCTGATAGAAATGGAGGCTACTGGAAA  600

seq1  GGGACATGGAAAACTTGATGGGTGGTCAAGCATATTGAGATAGGAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATGGAAAACTTGATGGGTGGTCAAGCATATTGAGATAGGAATGAA  650

seq1  TTC  653
      |||
seq2  TTC  653

seq1: chr2_145830101_145830636
seq2: B6Ng01-122F15.g_508_1039 (reverse)

seq1  ATAAAATCGACTTCCAACCCAAAGTTATCAAAAAAGACAAGGAGGGACAC  50
      |||||||  ||||||||||||||| ||||||||||| ||||||| |||||
seq2  ATAAAATAAACTTCCAACCCAAAG-TATCAAAAAAG-CAAGGAGAGACAC  48

seq1  TTCATACTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTGAA  100
       ||||||||||||||||| ||||| |||||||||||||||||| ||||||
seq2  -TCATACTCATCAAAGGT-AAATCTTCCAAGAGGAACTCTCAA-TCTGAA  95

seq1  TATCTACGCTCCAAATGC-AAGGGCAGCCACATTCATTAAAGACACCTTA  149
      ||| || || || ||||| |||||||||||||||||||||||||||||||
seq2  TATTTATGCCCCCAATGCAAAGGGCAGCCACATTCATTAAAGACACCTTA  145

seq1  GTAAAGCTCAAAGCACACATTGCATCTCACACAATAATAGTGGGAGACTT  199
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  GTAAAGCTCAAAGTACACATTGCACCTCACACAATAATAGTGGGAGACTT  195

seq1  CAACACACCACTTTCATCAAGGGACAGATCGTGGAAACAGAAACTAAACA  249
      ||||| ||||||||||||||  ||||||||||||||||||| ||||||||
seq2  CAACATACCACTTTCATCAATAGACAGATCGTGGAAACAGACACTAAACA  245

seq1  GGGACACAGTGAAACTAACAGAAGTTATGAAACAAATGGACCTAACAGAT  299
      ||||||||||||||| |||| |||| ||||||||||||||| ||||||||
seq2  GGGACACAGTGAAACGAACAAAAGTAATGAAACAAATGGACTTAACAGAT  295

seq1  ATCTACAGAACATTTTATCCTAAAACAAAAGGATATACCTTCTTCTCAGC  349
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATCTACAGAACATTTTATCCTAAAACAAAAGAATATACCTTCTTCTCAGC  345

seq1  ACCTCACGGGACCTTCTCCAAAATTGACCATATAATTGGTCACAAAACAG  399
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACCTCACGGGACCTTCTCCAAAATTGACCATATAATTGGTCATAAAACAG  395

seq1  GCCTCAACAGATACAAAAATATTGAAATTGTCCCATGTATCCTATCAGAC  449
      ||||||||| ||||||||||||||||||||||||||| ||||||||||||
seq2  GCCTCAACATATACAAAAATATTGAAATTGTCCCATGCATCCTATCAGAC  445

seq1  CACCATGGCCTAAGACTGATCTTCAATAACAACATAAATAATGGAAAGCC  499
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  CACCATGGACTAAGGCTGATCTTCAATAACAACATAAATAATGGAAAGCC  495

seq1  AACATTCACGTGGAAACTGAACAACACTCTTCTCAAT  536
      ||| |||| |||||||||||| |||||||||||||||
seq2  AACTTTCATGTGGAAACTGAATAACACTCTTCTCAAT  532