BAC Information

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BAC

Clone NameB6Ng01-123G21
Chromosome14 (Build37)
Map Location 33,376,261 - 33,377,418
singlet/doubletsinglet
Overlap geneErcc6
Upstream geneColq, Hacl1, Btd, Ankrd28, Galntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618
Downstream gene9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658, Lrrc18, EG622657, Arhgap22, Mapk8, LOC100040079, LOC665681, Frmpd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123G21.bB6Ng01-123G21.g
ACCDH926596DH926597
length1,168879
definitionDH926596|Mus musculus domesticus DNA, BAC clone: B6Ng01-123G21, 5' end.DH926597|Mus musculus domesticus DNA, BAC clone: B6Ng01-123G21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggatcagatttctcaggttctaactcttactttccctgaaagg
aatttatttgctcattgtataatttggaaattattagacagtgtaagtca
cacagataggagagttttggctttctagaacacttcccactgtggagtat
ccccagcgcctggcatgagtgtgatgctgagattgcagtgtctaggaaca
tcatggaccagtgaggcatgagagccagaagccgggcatctgaattttac
ttagctggacattgctgccactgggtcagtgaggtgtttctgtggccctt
gtgatgtcattttgtgagaaccgtaactggatctgcagcccttccagagg
tgagggtgtttattacgtaagaggacactgcttgttcctctccactgtag
gtctgctgcattccccacactgtggaagaagaacactgaggagtgggcct
gccagtgacgtggctcacagagctaggaaagcccagcctgccagggtttg
tggcacactaaagagaacatgtcttcacactctgttccatagtggcatca
tcagcattcagcatgactgtgtcttcagtgcgtctgtgtgctaggtggat
aagaggctaaagctacaggttctctcacaccctgcacgtagtttcattga
cttgacatgaacatttcctagggccaagtagacaaaggccgagctgttct
gtgtagcgttttcagaacaaggcttagcagcccagtgcattcgggtattg
tgccttccccctagcaggtgcaagctttcatgccctccaatgcatgctga
gcctggcagccatggtcttcacgctgcctatctgagcatgtacatctgag
tctgttcagaagtccactgccctccccaagctgtgtagtggctgcctgct
ctcctcaccctcagcacctggactttcagatccatcattttgacctattc
gtcacttctcagaactttcttttttgtttgctttggttttaaatgtttat
gtgtatgggtctttttggctgcatgtattgtgtgttctggggcacttgtg
ttgagcctggggcatatttggagaccagaagaggtttgttgaatcacttg
ggacttatagttataaagcgtgtgagctgcccattgggtgggggacattg
actggtgtactttggaaa
gaattcaaaatgcccagaaggatgcttgacatcattagccatcttggaca
tgcaagtccacagggagacactgggtcaagctcactggaatggctgcaag
tctgataagaacaaatgctggtgtgagtatggagaatgcagggggggggg
gaccctggtatactgcttatgggaatgttaagttgtaccttggaggtcag
actggaagtttttcaaataattactcatgtagtaatgatgtaagtcagta
attccactccgaattatctaccaatgatagattttgttcacacacacaaa
agcctgtacacaaacatccatagcaacattgttcacaataacccaaagtg
gaaagaactcaaatatccgacaactaatgaataaacaaactagatccggc
atgtccacacaatggactgttattcagccgtgaagtattcaaacctattg
ctacaagagattctgtggccaaccttacaaataagctcctgggtgacatt
tcttctcacttctcctgttctggggagtcccatgggctagaaactgtatc
tccgaggctcctttgtagatgaagtttcatctagtattcaccaaactgac
tcaattcttcaagatttaggaaaagaaggaacagagagtccctagttaca
cagcggcgcgtattgcccagaaagcctatggactcttctagggcagctgt
tgtggcttctgagtgcctggggacctgggtgtggaacagagggtgtcaca
tcgtgggtatttggctgaaagctttgtgttgctgagcaattcccctggct
gtgtacagccgagttattcctggctccctagagaactggaagaaaacaat
agattttaaaatctgctttctgattagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_33376261_33377418
seq2: B6Ng01-123G21.b_45_1212

seq1  GAATTCTGGATCAGATTTCTCAGGTTCTAACTCTTACTTTCCCTGAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGATCAGATTTCTCAGGTTCTAACTCTTACTTTCCCTGAAAGG  50

seq1  AATTTATTTGCTCATTGTATAATTTGGAAATTATTAGACAGTGTAAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTGCTCATTGTATAATTTGGAAATTATTAGACAGTGTAAGTCA  100

seq1  CACAGATAGGAGAGTTTTGGCTTTCTAGAACACTTCCCACTGTGGAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATAGGAGAGTTTTGGCTTTCTAGAACACTTCCCACTGTGGAGTAT  150

seq1  CCCCAGCGCCTGGCATGAGTGTGATGCTGAGATTGCAGTGTCTAGGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCGCCTGGCATGAGTGTGATGCTGAGATTGCAGTGTCTAGGAACA  200

seq1  TCATGGACCAGTGAGGCATGAGAGCCAGAAGCCGGGCATCTGAATTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGACCAGTGAGGCATGAGAGCCAGAAGCCGGGCATCTGAATTTTAC  250

seq1  TTAGCTGGACATTGCTGCCACTGGGTCAGTGAGGTGTTTCTGTGGCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGGACATTGCTGCCACTGGGTCAGTGAGGTGTTTCTGTGGCCCTT  300

seq1  GTGATGTCATTTTGTGAGAACCGTAACTGGATCTGCAGCCCTTCCAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTCATTTTGTGAGAACCGTAACTGGATCTGCAGCCCTTCCAGAGG  350

seq1  TGAGGGTGTTTATTACGTAAGAGGACACTGCTTGTTCCTCTCCACTGTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTGTTTATTACGTAAGAGGACACTGCTTGTTCCTCTCCACTGTAG  400

seq1  GTCTGCTGCATTCCCCACACTGTGGAAGAAGAACACTGAGGAGTGGGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTGCATTCCCCACACTGTGGAAGAAGAACACTGAGGAGTGGGCCT  450

seq1  GCCAGTGACGTGGCTCACAGAGCTAGGAAAGCCCAGCCTGCCAGGGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGACGTGGCTCACAGAGCTAGGAAAGCCCAGCCTGCCAGGGTTTG  500

seq1  TGGCACACTAAAGAGAACATGTCTTCACACTCTGTTCCATAGTGGCATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACACTAAAGAGAACATGTCTTCACACTCTGTTCCATAGTGGCATCA  550

seq1  TCAGCATTCAGCATGACTGTGTCTTCAGTGCGTCTGTGTGCTAGGTGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATTCAGCATGACTGTGTCTTCAGTGCGTCTGTGTGCTAGGTGGAT  600

seq1  AAGAGGCTAAAGCTACAGGTTCTCTCACACCCTGCACGTAGTTTCATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCTAAAGCTACAGGTTCTCTCACACCCTGCACGTAGTTTCATTGA  650

seq1  CTTGACATGAACATTTCCTAGGGCCAAGTAGACAAAGGCCGAGCTGTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACATGAACATTTCCTAGGGCCAAGTAGACAAAGGCCGAGCTGTTCT  700

seq1  GTGTAGCGTTTTCAGAACAAGGCTTAGCAGCCCAGTGCATTCGGGTATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGCGTTTTCAGAACAAGGCTTAGCAGCCCAGTGCATTCGGGTATTG  750

seq1  TGCCTTCCCCCTAGCAGGTGCAAGCTTTCATGCCCTCCAATGCATGCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCCCCTAGCAGGTGCAAGCTTTCATGCCCTCCAATGCATGCTGA  800

seq1  GCCTGGCAGCCATGGTCTTCACGCTGCCTATCTGAGCATGTACATCTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCAGCCATGGTCTTCACGCTGCCTATCTGAGCATGTACATCTGAG  850

seq1  TCTGTTCAGAAGTCCACTGCCCTCCCCAAGCTGTGTAGTGGCTGCCTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCAGAAGTCCACTGCCCTCCCCAAGCTGTGTAGTGGCTGCCTGCT  900

seq1  CTCCTCACCCTCAGGCACCTGGACTTTCAGATCCATCATTTTGACCTATT  950
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTCCTCACCCTCA-GCACCTGGACTTTCAGATCCATCATTTTGACCTATT  949

seq1  CGTCACTTCTCAGAACTTTCTTTTTTGTTTGCTTTGTTTTTAAATG-TTA  999
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  CGTCACTTCTCAGAACTTTCTTTTTTGTTTGCTTTGGTTTTAAATGTTTA  999

seq1  TGTGTATGGGTC-TTTTGGCTGCATGTA-TGTGTG-TCT-GTGCACTTGT  1045
      |||||||||||| ||||||||||||||| |||||| ||| | ||||||||
seq2  TGTGTATGGGTCTTTTTGGCTGCATGTATTGTGTGTTCTGGGGCACTTGT  1049

seq1  G-TGAGCCTGGTGCATA--TGGAG-CCAGAAGAGG-TTGTCAGATCACCT  1090
      | ||||||||| |||||  ||||| |||||||||| ||||   ||||| |
seq2  GTTGAGCCTGGGGCATATTTGGAGACCAGAAGAGGTTTGTTGAATCACTT  1099

seq1  GGAAC-TAGAGTTAGAAGGC-TGTGAGCTGCCATGTGGGTGGTGGGACTT  1138
      || || || ||||| || || |||||||||||   ||||||| ||||| |
seq2  GGGACTTATAGTTATAAAGCGTGTGAGCTGCCCATTGGGTGG-GGGACAT  1148

seq1  GAACCTGTGTACTTTGGAAA  1158
        ||  ||||||||||||||
seq2  TGACTGGTGTACTTTGGAAA  1168