BAC Information

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BAC

Clone NameB6Ng01-123N10
Chromosome14 (Build37)
Map Location 16,289,523 - 16,290,585
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667152, LOC100042147, Slc4a7, Nek10, Lrrc3b
Downstream geneLOC667205, 1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1, Top2b, Rarb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123N10.bB6Ng01-123N10.g
ACCDH926898DH926899
length1,2381,057
definitionDH926898|Mus musculus domesticus DNA, BAC clone: B6Ng01-123N10, 5' end.DH926899|Mus musculus domesticus DNA, BAC clone: B6Ng01-123N10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagtagttggactccagaaaaccaaataaccctattaaaaatgg
agtacagagctaaacaaagaattctcaaatgaggaagaccgaatggctga
gaagcacctgaaaaatgttcaacatgcttaaatcatcagggaaatgcaaa
tcaaaacaaccctgagattccacctcacaccaataagaatggctaagttc
aaaactcaggtgacagcagatactggcaaggatgtggagactggtgggat
tgcaagctgatacaaccactctgcaaatcagtttgctgttccctgagaaa
attgaacatagtactaatggaagatccagcaataccagtcctaggcatat
atgcagaagatgctccaacatgtaataaggacacatactccactacggtc
atagcagccttatttataacagccagaagctggaaagaacccagatgtcc
ctcaacagaggaatggatacagaaactgtggtacatttacacaatggagt
gctactcatctattacaaacaatgaacttattatattcttaagcaaatcg
atggatctggaggataaaatcctgagcaaagtaacccaatcacaaaagag
cacacatgatatgcagtcattgataagtgaatattagcccagaaactcag
aatacccaagatacaatttgcaaaacacatgaaactcaagaagaaggaag
accaaagtgtggttacttcgatccttcttagaagagggaacaaaataccc
atggaaggagttacagagacaaagttcagaacagagactgaaggaatggc
catccagagactaccctacctggggattcattccataaacaatcaccaaa
cccagacactattgcagataccaacagattttgctgacaggagcctgata
tagctctcttctgagaggctctgccattgcctggcaaatacagaaatgga
tgctcacagtcatttgttggacagagcacaggtcctcatgaaggagctgg
agaagtacccaagagctgaaaggggttgtagacctataggagactaacaa
tatggaataccagtacctcagagctccctggacagacacatcaaagaaaa
atacatgggtgactaagtttctagctgtatatttgcaaaaggatggccta
tcggcatcatagagagagagtgcttgggctcaagttctatgccgatatag
aagtcatgtcgggacaggatgtagtggtggggagcctg
gaattccacatgcaggagtggaaggaaccagccaggagataatgattgag
actgggatacttctctgtgtgcctttcaagttacagctgtctatgccaca
cttcacaaagctattctcttttccaatagaccattttggtgtgaacttca
aaccatcattcattgttgcttttggtaagcaggccttctcaaaggggatt
ctcaattatccattgggagcaatggcatctgtccagtagggaattcacag
tgtcttaccagagtctcacatagttaagcattgtgaaaagtcttgaatac
gtaatacaatttccttatagaatctaggaaaaacagtggaatgtttttca
gttatcacacagagaagcattccagtctaagccatcagctcaagactgga
gtcttccttccactcgtacatgtagaattcttcctgtgatgaactacgac
ctcagagacactgatcacagaggggaaggtgttgtctttccattcatatc
ataggcagttcaaatcaagacccagaaagacatgaaataaaatggaataa
atttacaaaaccataagtgtgtgtgtgtgtgtgtgtgtgtataagctcga
atttaagttgttcaacatggtctctgtcagtctctctgaaagactgaaca
ctattatcttatgtctataaaatggccctttctaatcagcagaaacaaag
acaagagactaaaatgagcaatgtcccctcctaagaattaactagtcaaa
aacagcagagaagccctctgggcaagtatcttgccattccacggaaaagg
agatcaaggattaggataactgaacacagtccagataagaactatggaag
ccctttgcagtcaccagaaagacctttagctactcagccagaatgagttg
agcttccagcagatagtgtaaggcagacaggtacacagccactgacatct
actggggatctgtaaatacactacaatgcagagcacagctaaattttcag
cctcaatgtgaatatgctgaaggttgaaaaatactcgtgcagatcatggt
gttttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16289523_16290585
seq2: B6Ng01-123N10.g_68_1124 (reverse)

seq1  TGAAAACA-CATGATCTTGCAC-AGTATTTTTCAACC-TCAGCATATTCA  47
      |||||||| ||||||| ||||| |||||||||||||| ||||||||||||
seq2  TGAAAACACCATGATC-TGCACGAGTATTTTTCAACCTTCAGCATATTCA  49

seq1  CATTTGAGGCTGAAAATTTTTTAAGCTGTGCTCTGCATTGTAGTGTATTT  97
      || ||||||||||||||||    |||||||||||||||||||||||||||
seq2  CA-TTGAGGCTGAAAATTT----AGCTGTGCTCTGCATTGTAGTGTATTT  94

seq1  AACAGAATCCCCAGTAGATGTCAGTGGCCTGTGTACCTGTTCTGCCCTTA  147
       |||| ||||||||||||||||||||| ||||||||||| |||| |||||
seq2  -ACAG-ATCCCCAGTAGATGTCAGTGG-CTGTGTACCTG-TCTG-CCTTA  139

seq1  CACTATCTGCTGGAAGCTCAACTCATTCTGGCTGAGTAGCTAAAGGTCTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCTGCTGGAAGCTCAACTCATTCTGGCTGAGTAGCTAAAGGTCTT  189

seq1  TCTGGTGACTGCAAAGGGCTTCCATAGTTC-TATCTTGACTGTGTTCAGT  246
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  TCTGGTGACTGCAAAGGGCTTCCATAGTTCTTATCTGGACTGTGTTCAGT  239

seq1  TATCCTAATCCTTGATCTCCTTTTCCGTGGAATGGCAAGATACTTGCCCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAATCCTTGATCTCCTTTTCCGTGGAATGGCAAGATACTTGCCCA  289

seq1  GAGGGCTTCTCTGCTG-TTTTGACTAGTTAATTCTTAGGAGGGGACATTG  345
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAGGGCTTCTCTGCTGTTTTTGACTAGTTAATTCTTAGGAGGGGACATTG  339

seq1  CTCATTTTAGTCTCTTGTCTTTGTTTCTGCTGATTAGAAAGGGCCATTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTAGTCTCTTGTCTTTGTTTCTGCTGATTAGAAAGGGCCATTTT  389

seq1  ATAGACATAAGATAATAGTGTTCAGTCTTTCAGAGAGACTGACAGAGACC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACATAAGATAATAGTGTTCAGTCTTTCAGAGAGACTGACAGAGACC  439

seq1  ATGTTGAACAACTTAAATTCGAGCTTATACACACACACACACACACACAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAACAACTTAAATTCGAGCTTATACACACACACACACACACACAC  489

seq1  ACTTATGGTTTTGTAAATTTATTCCATTTTATTTCATGTCTTTCTGGGTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGGTTTTGTAAATTTATTCCATTTTATTTCATGTCTTTCTGGGTC  539

seq1  TTGATTTGAACTGCCTATGATATGAATGGAAAGACAACACCTTCCCCTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGAACTGCCTATGATATGAATGGAAAGACAACACCTTCCCCTCT  589

seq1  GTGATCAGTGTCTCTGAGGTCGTAGTTCATCACAGGAAGAATTCTACATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCAGTGTCTCTGAGGTCGTAGTTCATCACAGGAAGAATTCTACATG  639

seq1  TACGAGTGGAAGGAAGACTCCAGTCTTGAGCTGATGGCTTAGACTGGAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAGTGGAAGGAAGACTCCAGTCTTGAGCTGATGGCTTAGACTGGAAT  689

seq1  GCTTCTCTGTGTGATAACTGAAAAACATTCCACTGTTTTTCCTAGATTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTGTGTGATAACTGAAAAACATTCCACTGTTTTTCCTAGATTCT  739

seq1  ATAAGGAAATTGTATTACGTATTCAAGACTTTTCACAATGCTTAACTATG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAAATTGTATTACGTATTCAAGACTTTTCACAATGCTTAACTATG  789

seq1  TGAGACTCTGGTAAGACACTGTGAATTCCCTACTGGACAGATGCCATTGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTCTGGTAAGACACTGTGAATTCCCTACTGGACAGATGCCATTGC  839

seq1  TCCCAATGGATAATTGAGAATCCCCTTTGAGAAGGCCTGCTTACCAAAAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATGGATAATTGAGAATCCCCTTTGAGAAGGCCTGCTTACCAAAAG  889

seq1  CAACAATGAATGATGGTTTGAAGTTCACACCAAAATGGTCTATTGGAAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATGAATGATGGTTTGAAGTTCACACCAAAATGGTCTATTGGAAAA  939

seq1  GAGAATAGCTTTGTGAAGTGTGGCATAGACAGCTGTAACTTGAAAGGCAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAGCTTTGTGAAGTGTGGCATAGACAGCTGTAACTTGAAAGGCAC  989

seq1  ACAGAGAAGTATCCCAGTCTCAATCATTATCTCCTGGCTGGTTCCTTCCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAGTATCCCAGTCTCAATCATTATCTCCTGGCTGGTTCCTTCCA  1039

seq1  CTCCTGCATGTGGAATTC  1063
      ||||||||||||||||||
seq2  CTCCTGCATGTGGAATTC  1057