BAC Information

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BAC

Clone NameB6Ng01-123N19
Chromosome14 (Build37)
Map Location 77,768,861 - 77,922,763
singlet/doubletdoublet
Overlap geneD230005D02Rik, EG629678
Upstream geneTsc22d1, 2810032E02Rik, LOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, LOC100043755, LOC676171
Downstream geneGm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123N19.bB6Ng01-123N19.g
ACCDH926916DH926917
length1,0731,146
definitionDH926916|Mus musculus domesticus DNA, BAC clone: B6Ng01-123N19, 5' end.DH926917|Mus musculus domesticus DNA, BAC clone: B6Ng01-123N19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,921,680 - 77,922,763)(77,768,861 - 77,770,008)
sequence
gaattcacagcgcaattactgcatattaacaaataaaagactttgatatt
aaaacaaagattcaatgcacattagtgtgcactcatgtacacatacgctt
gacaggtttaaactagtcaaatcaatctcggggtgtgaattgaagtattg
attctcttcctgttctttggggaaattagagtatcctctataagggaaaa
atacatgattttcctgagggcttactcaattgctacttttctactttctt
aacctctccccagaatcctctaggtaaaagcatgctcatcatatctatta
caacctataattgacaattaatcattgttgcaattatttatatagcatac
atattagataagtagttacttttctgttgatgtgataaaataccattatc
aaaagtaacttccttccttccttcctccctcccttccttccttcttccct
ttccttccttcctctcttcctccctttttcccatcctgccttccttcctt
cctcccttcctttccttcctctcttcctgccttcctcccttccttccttc
ctctcttcctttccttccttccttcctctcttcctcctttcttcccttct
ttccttcctccctttctcccttccttccttcctgccttccttcctccctt
tctcccttccttccttccttccttgcagggtccctcttccccagaagtgg
gcccccttggctatgtgtcaccagagcttggtgggtggtagtaggagggt
agtgagaacccctctgtgcctggtggcactatgccagtggcccttaggtc
ccttaggtcccttccctagcttttctcaatgggcattagcataccctatt
gccttttgtcaaggcctctatgaggttcaaagcccatcttagcatcttct
gcatgaccggatctaaggagtcacagaaaagcccccatttgactgagcag
tctcttccccacatgtgaaggtagagagggtatcagatcagctggaatct
ctctatttctagttcctccaatacaaatggctgtactttgagcagcgctg
aagccttgtcccactccatcgag
gaattcacttgcctcttggctggtgatttcctttaaaaaaaatttctggg
cttgaaatcttgaaaatatctaaaatttgtatggagtggaattttgttcc
ttgtgactggagtttgaacaaccaacctttttgaggaggcaatgcagtgg
ctggagagacagttcagtgatgaacaagaggactgctcttgcagagggcc
caggttcattctccaccacccacacaggacagttgccaaccgcctgtgag
tccagttccagatgtgtctgctgctctcttctcgcttctctaggcaactg
tactcacattctcacatacatactaaaatgaaaataaaatccttttttta
aaagagagagagagagggagagagagagagagagagagcagcatggcctc
ataggaaagttgattttattatttttaaaaagttttaaaaaatctgttgt
ccaataccaactggcatattaattcctggtagtaaataacaagtgaagag
ggcatgtaagtgctgacatccccggagccacacatttacagtcagcattt
gtattagaaggcataactttagcagcaaaaatgtgtggctgaaactcaag
aaagcaggcagttcttaaatgtcctaatcccagtgaccatcagtcataag
tcacttgctactgtcatagtcctgggtagttacaaacatttaaaaatgga
gaccgactacagaaacagaaacagacaacacattaaaggggccagcatca
tttcctgtccaccagtgattttattttcagagagatcccaaagggtcctt
accagggtgcagtttcacatgtttaaatctctatcctgaaaggtaggtgg
gtgctgttccggccactcatcgccttggttcctcccctccctcacaccca
acccatcttgtcatcatatttccctggcagctcacgctttgatttgcttt
ttcctggagtgattttgtcactctgcgacttgacctcaaacaagatagga
accatagcagatttttttggattcctttaagcagttaattctgttgacaa
gggtgggcatgttccagcccccaagttcctgagtgcattccttggtggat
gccaaagctagagacccagtgtggaatctcattctttatggagcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77921680_77922763
seq2: B6Ng01-123N19.b_49_1121 (reverse)

seq1  CTCGATGGAGTGGGACAAGCCTCCAGCGCTGCTCAAAGTACAGCCATTTT  50
      ||||||||||||||||||| || ||||||||||||||||||||||| |||
seq2  CTCGATGGAGTGGGACAAGGCTTCAGCGCTGCTCAAAGTACAGCCA-TTT  49

seq1  GTATTGGGAGGAACTAGAAATAGAGAGATTTTCCAGCCTGATCTGATACC  100
      ||||| ||||||||||||||||||||||  |||||| |||||||||||||
seq2  GTATT-GGAGGAACTAGAAATAGAGAGA--TTCCAG-CTGATCTGATACC  95

seq1  CTCTCTACCCTTCACACTGTGGGGAAGAGACTTGCTCAGTCAAATGGGGG  150
      ||||||| |||||||| |||||||||||||| ||||||||||||||||||
seq2  CTCTCTA-CCTTCACA-TGTGGGGAAGAGAC-TGCTCAGTCAAATGGGGG  142

seq1  CTTTTCTGTTGACTCCTTTAGATCCGGTCATGCAGAAGATGCTAAAGATG  200
      |||||||| ||||||| |||||||||||||||||||||||||| ||||||
seq2  CTTTTCTG-TGACTCC-TTAGATCCGGTCATGCAGAAGATGCT-AAGATG  189

seq1  GGCTTTGAACCTCATAGAGGCCTTGACAAAAGGCAATAGGGTATGCTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGAACCTCATAGAGGCCTTGACAAAAGGCAATAGGGTATGCTAAT  239

seq1  GCCCATTGAGAAAAGCTAGGGAAGGGACCTAAGGGACCTAAGGGCCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTGAGAAAAGCTAGGGAAGGGACCTAAGGGACCTAAGGGCCACTG  289

seq1  GCATAGTGCCACCAGGCACAGAGGGGTTCTCACTACCCTCCTACTACCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTGCCACCAGGCACAGAGGGGTTCTCACTACCCTCCTACTACCAC  339

seq1  CCACCAAGCTCTGGTGACACATAGCCAAGGGGGCCCACTTCTGGGGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAGCTCTGGTGACACATAGCCAAGGGGGCCCACTTCTGGGGAAGA  389

seq1  GGGACCCTGCAAGGAAGGAAGGAAGGAAGGGAGAAAGGGAGGAAGGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCCTGCAAGGAAGGAAGGAAGGAAGGGAGAAAGGGAGGAAGGAAGG  439

seq1  CAGGAAGGAAGGAAGGGAGAAAGGGAGGAAGGAAAGAAGGGAAGAAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGGAAGGAAGGGAGAAAGGGAGGAAGGAAAGAAGGGAAGAAAGGA  489

seq1  GGAAGAGAGGAAGGAAGGAAGGAAAGGAAGAGAGGAAGGAAGGAAGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGAGGAAGGAAGGAAGGAAAGGAAGAGAGGAAGGAAGGAAGGGAG  539

seq1  GAAGGCAGGAAGAGAGGAAGGAAAGGAAGGGAGGAAGGAAGGAAGGCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGGAAGAGAGGAAGGAAAGGAAGGGAGGAAGGAAGGAAGGCAGG  589

seq1  ATGGGAAAAAGGGAGGAAGAGAGGAAGGAAGGAAAGGGAAGAAGGAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAAAGGGAGGAAGAGAGGAAGGAAGGAAAGGGAAGAAGGAAGGA  639

seq1  AGGGAGGGAGGAAGGAAGGAAGGAAGTTACTTTTGATAATGGTATTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGAGGAAGGAAGGAAGGAAGTTACTTTTGATAATGGTATTTTAT  689

seq1  CACATCAACAGAAAAGTAACTACTTATCTAATATGTATGCTATATAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCAACAGAAAAGTAACTACTTATCTAATATGTATGCTATATAAATA  739

seq1  ATTGCAACAATGATTAATTGTCAATTATAGGTTGTAATAGATATGATGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAACAATGATTAATTGTCAATTATAGGTTGTAATAGATATGATGAG  789

seq1  CATGCTTTTACCTAGAGGATTCTGGGGAGAGGTTAAGAAAGTAGAAAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTTACCTAGAGGATTCTGGGGAGAGGTTAAGAAAGTAGAAAAGT  839

seq1  AGCAATTGAGTAAGCCCTCAGGAAAATCATGTATTTTTCCCTTATAGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTGAGTAAGCCCTCAGGAAAATCATGTATTTTTCCCTTATAGAGG  889

seq1  ATACTCTAATTTCCCCAAAGAACAGGAAGAGAATCAATACTTCAATTCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTAATTTCCCCAAAGAACAGGAAGAGAATCAATACTTCAATTCAC  939

seq1  ACCCCGAGATTGATTTGACTAGTTTAAACCTGTCAAGCGTATGTGTACAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGAGATTGATTTGACTAGTTTAAACCTGTCAAGCGTATGTGTACAT  989

seq1  GAGTGCACACTAATGTGCATTGAATCTTTGTTTTAATATCAAAGTCTTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCACACTAATGTGCATTGAATCTTTGTTTTAATATCAAAGTCTTTT  1039

seq1  ATTTGTTAATATGCAGTAATTGCGCTGTGAATTC  1084
      ||||||||||||||||||||||||||||||||||
seq2  ATTTGTTAATATGCAGTAATTGCGCTGTGAATTC  1073

seq1: chr14_77768861_77770008
seq2: B6Ng01-123N19.g_68_1213

seq1  GAATTCACTTGCCTCTTGGCTGGTGATTTCCTTTAAAAAAAATTTCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGCCTCTTGGCTGGTGATTTCCTTTAAAAAAAATTTCTGGG  50

seq1  CTTGAAATCTTGAAAATATCTAAAATTTGTATGGAGTGGAATTTTGTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAATCTTGAAAATATCTAAAATTTGTATGGAGTGGAATTTTGTTCC  100

seq1  TTGTGACTGGAGTTTGAACAACCAACCTTTTTGAGGAGGCAATGCAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACTGGAGTTTGAACAACCAACCTTTTTGAGGAGGCAATGCAGTGG  150

seq1  CTGGAGAGACAGTTCAGTGATGAACAAGAGGACTGCTCTTGCAGAGGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAGACAGTTCAGTGATGAACAAGAGGACTGCTCTTGCAGAGGGCC  200

seq1  CAGGTTCATTCTCCACCACCCACACAGGACAGTTGCCAACCGCCTGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCATTCTCCACCACCCACACAGGACAGTTGCCAACCGCCTGTGAG  250

seq1  TCCAGTTCCAGATGTGTCTGCTGCTCTCTTCTCGCTTCTCTAGGCAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTCCAGATGTGTCTGCTGCTCTCTTCTCGCTTCTCTAGGCAACTG  300

seq1  TACTCACATTCTCACATACATACTAAAATGAAAATAAAATCCTTTTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACATTCTCACATACATACTAAAATGAAAATAAAATCCTTTTTTTA  350

seq1  AAAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGCAGCATGGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGCAGCATGGCCTC  400

seq1  ATAGGAAAGTTGATTTTATTATTTTTAAAAAGTTTTAAAAAATCTGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAAGTTGATTTTATTATTTTTAAAAAGTTTTAAAAAATCTGTTGT  450

seq1  CCAATACCAACTGGCATATTAATTCCTGGTAGTAAATAACAAGTGAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACCAACTGGCATATTAATTCCTGGTAGTAAATAACAAGTGAAGAG  500

seq1  GGCATGTAAGTGCTGACATCCCCGGAGCCACACATTTACAGTCAGCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTAAGTGCTGACATCCCCGGAGCCACACATTTACAGTCAGCATTT  550

seq1  GTATTAGAAGGCATAACTTTAGCAGCAAAAATGTGTGGCTGAAACTCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAGAAGGCATAACTTTAGCAGCAAAAATGTGTGGCTGAAACTCAAG  600

seq1  AAAGCAGGCAGTTCTTAAATGTCCTAATCCCAGTGACCATCAGTCATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGCAGTTCTTAAATGTCCTAATCCCAGTGACCATCAGTCATAAG  650

seq1  TCACTTGCTACTGTCATAGTCCT-GGTAGTTACAAACATTTAAAAATGGA  699
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCACTTGCTACTGTCATAGTCCTGGGTAGTTACAAACATTTAAAAATGGA  700

seq1  GACCGACTACAGAAACAGAAACAGACAAACACATTAAAGGGGCCAGCATC  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GACCGACTACAGAAACAGAAACAGAC-AACACATTAAAGGGGCCAGCATC  749

seq1  ATTTCCTGTCCACCAGTGATTTTATTTTCAGAGAGATCCC-AAGGGTCCT  798
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATTTCCTGTCCACCAGTGATTTTATTTTCAGAGAGATCCCAAAGGGTCCT  799

seq1  TACCAGGGTTGCAG-TTCACATGTTTAAATCTCTATCCTGAAAGGTAGGT  847
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  TACCAGGG-TGCAGTTTCACATGTTTAAATCTCTATCCTGAAAGGTAGGT  848

seq1  GGGTGCTGTTCCGGCCACTCATCGCCTTGGTTCCTCCCCCTCCCTCACAC  897
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGGTGCTGTTCCGGCCACTCATCGCCTTGGTTCCT-CCCCTCCCTCACAC  897

seq1  CCAACCCCATCTTGTCATCATATTTCCCTGGCAGCTCACGCTTTGATTTG  947
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAA-CCCATCTTGTCATCATATTTCCCTGGCAGCTCACGCTTTGATTTG  946

seq1  CTTTTGTCCT-GAGTGATTTTGTCCACTCTGCCGACTTGGACACTCAAAC  996
      ||||| |||| |||||||||||| ||||||| |||||| ||| |||||||
seq2  CTTTT-TCCTGGAGTGATTTTGT-CACTCTG-CGACTT-GAC-CTCAAAC  991

seq1  AAGATAAGGAAACCAAAAGCAGATTTTTTTGTATCCCTTT-AGCAGTAAA  1045
      ||||| |||||  | | |||||||||||||| || ||||| |||||| ||
seq2  AAGAT-AGGAA--CCATAGCAGATTTTTTTGGATTCCTTTAAGCAGTTAA  1038

seq1  TTCTGTTGACAAGGGTGGACATGTCTCAG-CCCCAGGTTCCTGAGTGCTA  1094
      |||||||||||||||||| |||||  ||| ||||| ||||||||||||  
seq2  TTCTGTTGACAAGGGTGGGCATGTTCCAGCCCCCAAGTTCCTGAGTGCAT  1088

seq1  TCCTT-GTTGATGCTAAAGCTAGGAGCCCC----TGGTGACTCTTTCTTT  1139
      ||||| || ||||| ||||||| ||| |||    |||   ||| ||||||
seq2  TCCTTGGTGGATGCCAAAGCTA-GAGACCCAGTGTGGAATCTCATTCTTT  1137

seq1  ATGGAGCAC  1148
      |||||||||
seq2  ATGGAGCAC  1146