BAC Information

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BAC

Clone NameB6Ng01-124G12
Chromosome14 (Build37)
Map Location 16,040,630 - 16,177,420
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
Downstream geneLrrc3b, LOC667205, 1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124G12.bB6Ng01-124G12.g
ACCDH927322DH927323
length544996
definitionDH927322|Mus musculus domesticus DNA, BAC clone: B6Ng01-124G12, 5' end.DH927323|Mus musculus domesticus DNA, BAC clone: B6Ng01-124G12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,176,871 - 16,177,420)(16,040,630 - 16,041,551)
sequence
aacaaaggatcacatatcctccctgatatatgtgtttatgcaaacattta
tttatgctgttagggacgcttgaacatcttacctttgatatttactactt
aacaatcactgttactttgttcctttaatggctcgcttagaccataatgt
actcaaaatgatagttctacctactctttcttccaccataattcgttttc
tgcattgtccatttttgttaataacacttttaattagcaaacaaaataat
ggctttcgttatgttttcatatacatatatcactgtattgcccttatttt
gctctcttttgatcatgttcccacatcctcctgctccccttatttatatt
ctgcatatgagacaaagtttgcaaaacttctctttattttccccacatta
cttactcctattttcacctttccactactccagataatacctttcttcct
aaaggatgcacacatacacacattccaagtgcaattcttatccttgtaag
cctggcttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgta
gaattcctccccaagtcatgaaatcattgatatacacaaattgagttttg
tatattttttctgtaagtttggctgtctttcataggcagacagaaagcct
acctatatagaaaaattaaggttgtaaggctgataaattaaatcctagat
gtgaaatggctaataaaagataaatatgagagaaaggaattctgttccag
tcagaggtaacttttctcttttctcttctctcttttctcttttctccttt
ctttctcttttctcttttctttctcttttctctcatttctcttttcttct
cttttctcttttctctcctctcctctcctctcctctccttttcttttctc
ttctcttcttttcttttctgtttgttgagttttatcttgatgacagattg
actagtgttcagctctgattatatgtccaagcaagttcagtcaatcaaga
gggtctcaaggaagggagtgaggattaaaaacagaaaagacaattagaca
acattatagcatgactccagtcattgctgaagcaggcttttttttccagt
ctgctttaataccattctaggtacatgtaaagaatagggtcagttttagg
taaaaaacaaagtactccaggaacaagcaaagcataagcaaaggtctcat
gattattgtaattagttagtgattaagatacaaagaacacattcctcagc
tgtattcatcttgagcccactgtcaaattcttgtctgagcctactctctt
ttcctaacccaatgtaaatattcttgttcataagattgaagcagtaccaa
gagctctccacatctccctccctccttttttaatttcataacaagactgc
atctatcttaggttgttctaacaatataacctccttacctgaatatgcat
atccaagcatgtattctgtctagatagtagggctctgtgcaaatcttacc
tgtattgactgcagctgttaaattaatgagctggctgggatcattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16176871_16177420
seq2: B6Ng01-124G12.b_48_597 (reverse)

seq1  TACACACACACACACACACACACACACACACACACTAAGCCAGGCTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACACACACACACACACACACACACACACTAAGCCAGGCTTACA  50

seq1  AGGATAAGAATTGCACTTGGAATGTGTGTATGTGTGCATCCTTTAGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAGAATTGCACTTGGAATGTGTGTATGTGTGCATCCTTTAGGAAG  100

seq1  AAAGGTATTATCTGGAGTAGTGGAAAGGTGAAAATAGGAGTAAGTAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTATTATCTGGAGTAGTGGAAAGGTGAAAATAGGAGTAAGTAATGT  150

seq1  GGGGAAAATAAAGAGAAGTTTTGCAAACTTTGTCTCATATGCAGAATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAATAAAGAGAAGTTTTGCAAACTTTGTCTCATATGCAGAATATA  200

seq1  AATAAGGGGAGCAGGAGGATGTGGGAACATGATCAAAAGAGAGCAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGGGAGCAGGAGGATGTGGGAACATGATCAAAAGAGAGCAAAATA  250

seq1  AGGGCAATACAGTGATATATGTATATGAAAACATAACGAAAGCCATTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAATACAGTGATATATGTATATGAAAACATAACGAAAGCCATTATT  300

seq1  TTGTTTGCTAATTAAAAGTGTTATTAACAAAAATGGACAATGCAGAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGCTAATTAAAAGTGTTATTAACAAAAATGGACAATGCAGAAAAC  350

seq1  GAATTATGGTGGAAGAAAGAGTAGGTAGAACTATCATTTTGAGTACATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATGGTGGAAGAAAGAGTAGGTAGAACTATCATTTTGAGTACATTA  400

seq1  TGGTCTAAGCGAGCCATTAAAGGAACAAAGTAACAGTGATTGTTAAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTAAGCGAGCCATTAAAGGAACAAAGTAACAGTGATTGTTAAGTAG  450

seq1  TAAATATCAAAGGTAAGATGTTCAAGCGTCCCTAACAGCATAAATAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATCAAAGGTAAGATGTTCAAGCGTCCCTAACAGCATAAATAAATG  500

seq1  TTTGCATAAACACATATATCAGGGAGGATATGTGATCCTTTGTTGAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATAAACACATATATCAGGGAGGATATGTGATCCTTTGTTGAATTC  550

seq1: chr14_16040630_16041551
seq2: B6Ng01-124G12.g_69_983

seq1  GAATTCCTCCCCAAGTCATGAAATCATTGATATACACAAATTGAGTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCCAAGTCATGAAATCATTGATATACACAAATTGAGTTTTG  50

seq1  TATATTTTTTCTGTAAGTTTGGCTGTCTTTCATAGGCAGACAGAAAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTTCTGTAAGTTTGGCTGTCTTTCATAGGCAGACAGAAAGCCT  100

seq1  ACCTATATAGAAAAATTAAGGTTGTAAGGCTGATAAATTAAATCCTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATATAGAAAAATTAAGGTTGTAAGGCTGATAAATTAAATCCTAGAT  150

seq1  GTGAAATGGCTAATAAAAGATAAATATGAGAGAAAGGAATTCTGTTCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATGGCTAATAAAAGATAAATATGAGAGAAAGGAATTCTGTTCCAG  200

seq1  TCAGAGGTAACTTTTCTCTTTTCTCTTCTCTCTTTTCTCTTTTCTCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGTAACTTTTCTCTTTTCTCTTCTCTCTTTTCTCTTTTCTCCTTT  250

seq1  CTTTCTCTTTTCTCTTTTCTTTCTCTTTTCTCTCATTTCTCTTTTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTTTTCTCTTTTCTTTCTCTTTTCTCTCATTTCTCTTTTCTTCT  300

seq1  CTTTTCTCTTTTCTCTCCTCTCCTCTCCTCTCCTCTCCTTTTCTTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTTTTCTCTCCTCTCCTCTCCTCTCCTCTCCTTTTCTTTTCTC  350

seq1  TTCTCTTCTTTTCTTTTCTGTTTGTTGAGTTTTATCTTGATGACAGATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTTTTCTTTTCTGTTTGTTGAGTTTTATCTTGATGACAGATTG  400

seq1  ACTAGTGTTCAGCTCTGATTATATGTCCAAGCAAGTTCAGTCAATCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTGTTCAGCTCTGATTATATGTCCAAGCAAGTTCAGTCAATCAAGA  450

seq1  GGGTCTCAAGGAAGGGAGTGAGGATTAAAAACAGAAAAGACAATTAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCAAGGAAGGGAGTGAGGATTAAAAACAGAAAAGACAATTAGACA  500

seq1  ACATTATAGCATGACTCCAGTCATTGCTGAAGCAGGCTTTTTTTTCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATAGCATGACTCCAGTCATTGCTGAAGCAGGCTTTTTTTTCCAGT  550

seq1  CTGCTTTAATACCATTCTAGGTACATGTAAAGAATAGGGTCAGTTTTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTAATACCATTCTAGGTACATGTAAAGAATAGGGTCAGTTTTAGG  600

seq1  TAAAAAACAAAGTACTCCAGGAACAAGCAAAGCATAAGCAAAGGTCTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAACAAAGTACTCCAGGAACAAGCAAAGCATAAGCAAAGGTCTCAT  650

seq1  GATTATTGTAATTAGTTAGTGATTAAGATACAAAGAACACATTCCTCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTGTAATTAGTTAGTGATTAAGATACAAAGAACACATTCCTCAGC  700

seq1  TGTATTCATCTTGAGCCCACTGTCAAATTCTTGTCTGAGCCTACTCTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCATCTTGAGCCCACTGTCAAATTCTTGTCTGAGCCTACTCTCTT  750

seq1  TTCCTAACCCAATGTAAATATTCTTGTTCATAAGATTGAAGCAGTACCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAACCCAATGTAAATATTCTTGTTCATAAGATTGAAGCAGTACCAA  800

seq1  GAGCTCTCCACATCTCCCTCCCTCCTTTTTTAAATTTCATAAACAAGACT  850
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  GAGCTCTCCACATCTCCCTCCCTCCTTTTTT-AATTTCAT-AACAAGACT  848

seq1  GCATCTATCTTAGGTTGTTCTAACAAATATTAACCTCCTTACCTGAATAT  900
      |||||||||||||||||||||||| |||| ||||||||||||||||||||
seq2  GCATCTATCTTAGGTTGTTCTAAC-AATA-TAACCTCCTTACCTGAATAT  896

seq1  GCATTATCCAAAGCAATGTATT  922
      ||| ||||| |||| |||||||
seq2  GCA-TATCC-AAGC-ATGTATT  915