BAC Information

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BAC

Clone NameB6Ng01-124I08
Chromosome14 (Build37)
Map Location 62,700,729 - 62,876,010
singlet/doubletdoublet
Overlap genenone
Upstream geneSacs, Sgcg, Arl11, EG432864, Ebpl, Kpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253
Downstream geneDleu7, Rnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124I08.bB6Ng01-124I08.g
ACCDH927406DH927407
length1,122262
definitionDH927406|Mus musculus domesticus DNA, BAC clone: B6Ng01-124I08, 5' end.DH927407|Mus musculus domesticus DNA, BAC clone: B6Ng01-124I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,700,729 - 62,701,855)(62,875,749 - 62,876,010)
sequence
gaattcaaggtcatcctagactacataggaagtcttagaccagcttgagc
tatatgaaatcctctctggaaagaagaaagaaagaaaagaagagaagaga
agagaagagaagagaagagaagagaagagaagagaagagaagagaagaga
agagaagaggaaagaaagatggaaggagggaagaaaggaagaagggaaaa
gcaagcaagcaagcaagtcagttctactttcttgagtagaattcacaaga
gtgggtctggactggatttgtcttgttcacagattgttttaaacatttga
gtcaatgtggagacatcaggaatttcatacaaaaattcaaatctagtttt
tcctgaaaaaccttaatggtttagtcacttgtgctgcttccacacaggtt
attgggcccctgggagcctgtctgggagaggacaagcactttgtagccca
ccgctggatgtctgaccccatagctgctgattctctctgaaataccccac
taggctccatctggggactttgcactgccctatctctagcttgggatgtt
cctcctctaagtaccttcatggctcttgtttgatcaagctcctggtagag
gctgtctcctgataggagctctcaacatctagaactgaaaggccacactc
ccctcatccttccttatttatcattgccacgttttcccaggcatccatat
cgtgtggcacatgtatttttaatgtgtttattcactcatttaaaaatacc
cctctatccgagcatggtggcgcacacctttaatcccagcactcaggagg
cagaggaaggcggatttctgagtttgaggccagcctggtctacaagtgag
ttccgggacagccagggctacacagagaaccctgtctcgacccccccccc
aaatacccctctgatgagtccattggtggtagtgtcggatctgccttcta
ctatcccagtgcttggcatgggacaagcccttcaatgaagtttgttgaac
aaataccacccttgtaggtgccccgcttctgagcacgatataggtttgta
aagaagaacaaaagattgctgactcctctaaagcaaaaagagactcccta
gaaaggcttgggccaatgatcc
caatgtcccctttcttctctcaccttctctctctcctactacctagtgtc
aggggattggaagggataagggaggcgaaggatagtagggaaaacaactc
aataaagtacccaaaagtatggttacaaatgtctgcaattctcactgagt
aatttggatctgcttgacagctggtggtatggttggaaggggtggggtct
ttaggaagtgggacctccattctccttttatgttcatctcaggtattttg
tttcaggataac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_62700729_62701855
seq2: B6Ng01-124I08.b_45_1166

seq1  GAATTCAAGGTCATCCTAGACTACATAGGAAGTCTTAGACCAGCTTGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTCATCCTAGACTACATAGGAAGTCTTAGACCAGCTTGAGC  50

seq1  TATATGAAATCCTCTCTGGAAAGAAGAAAGAAAGAAAAGAAGAGAAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAAATCCTCTCTGGAAAGAAGAAAGAAAGAAAAGAAGAGAAGAGA  100

seq1  AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGA  150

seq1  AGAGAAGAGGAAAGAAAGATGGAAGGAGGGAAGAAAGGAAGAAGGGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGAGGAAAGAAAGATGGAAGGAGGGAAGAAAGGAAGAAGGGAAAA  200

seq1  GCAAGCAAGCAAGCAAGTCAGTTCTACTTTCTTGAGTAGAATTCACAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCAAGCAAGCAAGTCAGTTCTACTTTCTTGAGTAGAATTCACAAGA  250

seq1  GTGGGTCTGGACTGGATTTGTCTTGTTCACAGATTGTTTTAAACATTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCTGGACTGGATTTGTCTTGTTCACAGATTGTTTTAAACATTTGA  300

seq1  GTCAATGTGGAGACATCAGGAATTTCATACAAAAATTCAAATCTAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGTGGAGACATCAGGAATTTCATACAAAAATTCAAATCTAGTTTT  350

seq1  TCCTGAAAAACCTTAATGGTTTAGTCACTTGTGCTGCTTCCACACAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAAAAACCTTAATGGTTTAGTCACTTGTGCTGCTTCCACACAGGTT  400

seq1  ATTGGGCCCCTGGGAGCCTGTCTGGGAGAGGACAAGCACTTTGTAGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGCCCCTGGGAGCCTGTCTGGGAGAGGACAAGCACTTTGTAGCCCA  450

seq1  CCGCTGGATGTCTGACCCCATAGCTGCTGATTCTCTCTGAAATACCCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGGATGTCTGACCCCATAGCTGCTGATTCTCTCTGAAATACCCCAC  500

seq1  TAGGCTCCATCTGGGGACTTTGCACTGCCCTATCTCTAGCTTGGGATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTCCATCTGGGGACTTTGCACTGCCCTATCTCTAGCTTGGGATGTT  550

seq1  CCTCCTCTAAGTACCTTCATGGCTCTTGTTTGATCAAGCTCCTGGTAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTAAGTACCTTCATGGCTCTTGTTTGATCAAGCTCCTGGTAGAG  600

seq1  GCTGTCTCCTGATAGGAGCTCTCAACATCTAGAACTGAAAGGCCACACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTCCTGATAGGAGCTCTCAACATCTAGAACTGAAAGGCCACACTC  650

seq1  CCCTCATCCTTCCTTATTTATCATTGCCACG-TTTCCCAGGCATCCATAT  699
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCTCATCCTTCCTTATTTATCATTGCCACGTTTTCCCAGGCATCCATAT  700

seq1  CGTGTGGCACATGTATTTTTAATGTGTTTATTCACTCA-TTAAAAATACC  748
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CGTGTGGCACATGTATTTTTAATGTGTTTATTCACTCATTTAAAAATACC  750

seq1  CCTCTATCCGAGCATGGTGGCGCACACCTTTAATCCCAGCACTCAGGAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATCCGAGCATGGTGGCGCACACCTTTAATCCCAGCACTCAGGAGG  800

seq1  CAGAGGAAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGA  848
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAGAGGAAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTAC-AAGTGA  849

seq1  GTTCCGGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAACCCCCCC  898
      |||||||||||||||||||||||||||| |||||||||||| ||||||||
seq2  GTTCCGGGACAGCCAGGGCTACACAGAG-AACCCTGTCTCG-ACCCCCCC  897

seq1  CCCAAATACCCCTCTGATGGAGTCCATTTGTGGTAGTGTCGTGATCTGCC  948
      |||||||||||||||||| ||||||||| |||||||||||| ||||||||
seq2  CCCAAATACCCCTCTGAT-GAGTCCATTGGTGGTAGTGTCG-GATCTGCC  945

seq1  TTCTACCTATCCCAGTGCCTGGCATGGGACAAGCCC-TCAATGAAGGTTT  997
      ||||| |||||||||||| ||||||||||||||||| |||||||| ||||
seq2  TTCTA-CTATCCCAGTGCTTGGCATGGGACAAGCCCTTCAATGAA-GTTT  993

seq1  GTTGAACAAATACCACCCTTGTAGGTTGCTCGCTTTCTGAGCACGATA-A  1046
      ||||||||||||||||||||||||||  | ||| |||||||||||||| |
seq2  GTTGAACAAATACCACCCTTGTAGGTGCCCCGC-TTCTGAGCACGATATA  1042

seq1  GGTTGGAAAAGAAGAGCAAAAGAGATGCTGACT-CTCACAGAGAAAAAGA  1095
      |||| | |||||||| |||||||  |||||||| |||  |   |||||||
seq2  GGTTTGTAAAGAAGAACAAAAGA-TTGCTGACTCCTCTAAAGCAAAAAGA  1091

seq1  GCATCTCTAGAAAGCCTGGGCCCAAATGATCC  1127
      |  || |||||||| || || || ||||||||
seq2  GACTCCCTAGAAAGGCTTGGGCC-AATGATCC  1122

seq1: chr14_62875749_62876010
seq2: B6Ng01-124I08.g_75_336 (reverse)

seq1  GTTATCCTGTAACAAAATACCTGAGATGAACATAAAAGGAGAATGGAGGT  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCTGAAACAAAATACCTGAGATGAACATAAAAGGAGAATGGAGGT  50

seq1  CCCACTTCCTAAAGACCCCACCCCTTCCAACCATACCACCAGCTGTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTCCTAAAGACCCCACCCCTTCCAACCATACCACCAGCTGTCAAG  100

seq1  CAGATCCAAATTACTCAGTGAGAATTGCAGACATTTGTAACCATACTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCAAATTACTCAGTGAGAATTGCAGACATTTGTAACCATACTTTT  150

seq1  GGGTACTTTATTGAGTTGTTTTCCCTACTATCCTTCGCCTCCCTTATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTTTATTGAGTTGTTTTCCCTACTATCCTTCGCCTCCCTTATCCC  200

seq1  TTCCAATCCCCTGACACTAGGTAGTAGGAGAGAGAGAAGGTGAGAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATCCCCTGACACTAGGTAGTAGGAGAGAGAGAAGGTGAGAGAAGA  250

seq1  AAGGGGACATTG  262
      ||||||||||||
seq2  AAGGGGACATTG  262