BAC Information

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BAC

Clone NameB6Ng01-125C07
Chromosome14 (Build37)
Map Location 28,850,601 - 28,850,914
singlet/doubletsinglet
Overlap geneErc2
Upstream geneIl17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneLOC100040206, Wnt5a, LOC100040218, Cacna2d3, Lrtm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125C07.bB6Ng01-125C07.g
ACCDH927862DH927863
length963943
definitionDH927862|Mus musculus domesticus DNA, BAC clone: B6Ng01-125C07, 5' end.DH927863|Mus musculus domesticus DNA, BAC clone: B6Ng01-125C07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgttccattggtctacttgtctgtcactataccagtaccattca
gtttttatcacaattgctctgtagtaaagctttatgtcagggatggtgat
tccatcagaggttcttttatccttgagaagagtttttgctatccttggtt
ttttgttattccagatgaatctgcggatttccctttctaattcgttgaag
aattgagttggaattttgatggggattgctttgaatctgtagattgcttt
tggcaagatagccatttatacaatgttgatcctgccaatccatgagcatg
ggagatctttctaccttctgagatcttctttaatttctttcttcagagac
ttgaagttcttatcatacagatctttcacttccttagttagagtcacacc
aaggtattttatattatttgtgactattgagaagggtgttgtttccctaa
tttctttctcagcctgtttatcctttgtgtagagaaagtccactgacttg
tttgagttaattttatatccagctacttcactgaagctgtttaccaggct
taggagttctctggtggaatttttagggtcacttatatatactatcatat
catctgcaaaaagtgatattttgactttcttactttccaatttgtatccc
cttgatctttcttttgttgtctaattgctctggctaggatttcaagtaca
atgttgaatagatatggagagagtggacagccttgtctagtccctgattt
tagtgggattgctttcagcttctctccatttactttgatgttgggttact
gggtttgctgtagaatgcttttatccttgtttaggtatgggccttgattc
cctgacttttcaaaggtttttatcatgaatgggtgttggattttgttaat
gctctctcacctcctaaagagatgatacgggtttcttgttctcatagtgg
ttttatctgaatt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaaa
aatgttcaacatccttaatcatcagggaaatgcaaatcgaaacaaccctg
acattccacctcacaccagtcagaatggctaagatcaaaaattcaggtga
cagcagatgctgttgtggatgtggagaaagaggaacactcctccattgtt
ggtgggattgcaggcttgtacaaccactctggaaatcagtctggcggttc
ctcagaaaattggacatagtactaccggaggatccagcaatacctctcct
gtgcatatatccagaagatgccccaactggtaagaaggacacatgctcca
atatcttcatagcagctttatttataatagccagaagctcataagaaccc
agatgcccctcaacagaggaatggatatagaaaatgtggtacatttacac
aatggagtactactcagctattaaaaagaatgaatttatgaaattcctag
caaaatggatggacctggagggcatcatcctgagtgaggtaacacattca
caaaggaactcacacaatatatactcactgataagtggatattagccccg
aacctaggattcccaagatataagatacaatttgctaaacacatgaaact
caagaagaatgaagactgaagtgtggacactatgcccctccttagaattg
ggaacaaaacacacatggaaggagttacagagacaaagtttggagctgag
atgaaaggatggaccatgtagagactgccatatccagggatccaccccat
aatcagcatccaaacgctaacaccattgcatacactagcaagattttatc
gaaaggacccagatgtagctgtctcttgtgagactatgccagggcctagc
aaacacagaagtggatgctcacagtcagctaatggatggatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28850601_28850914
seq2: B6Ng01-125C07.g_696_1009 (reverse)

seq1  TGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGC  50

seq1  CCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAA  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAA  100

seq1  TCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGATTATGGGGT  150
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTTGCTAGTGTATGCAATGGTGTTAGCGTTTGGATGCTGATTATGGGGT  150

seq1  GGATCCCTGGATATGGCAGTCTCTACATGGTCCATCCTTTCATCTCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCCTGGATATGGCAGTCTCTACATGGTCCATCCTTTCATCTCAGCT  200

seq1  CCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAAATCT  250
      |||||||||||||||||||||||||||||| ||||||||||||||| |||
seq2  CCAAACTTTGTCTCTGTAACTCCTTCCATGTGTGTTTTGTTCCCAATTCT  250

seq1  AAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTCTTCTTGAGTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTCTTCTTGAGTTTCA  300

seq1  TGTGTTTAGCAAAT  314
      ||||||||||||||
seq2  TGTGTTTAGCAAAT  314