BAC Information

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BAC

Clone NameB6Ng01-125E21
Chromosome14 (Build37)
Map Location 102,674,388 - 102,675,532
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
Downstream geneLOC669278, Kctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125E21.bB6Ng01-125E21.g
ACCDH927979DH927980
length1,1121,118
definitionDH927979|Mus musculus domesticus DNA, BAC clone: B6Ng01-125E21, 5' end.DH927980|Mus musculus domesticus DNA, BAC clone: B6Ng01-125E21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctataaagtcatcaggaattatgaaatcatcaatttgtctacata
acaatgctacttgagagtacatcttcatattgcagaaaatctgtccaata
gggtggactaatgtcaaggaatcattagtctgtataataatgtcaggaaa
gatatagcagcaagaagcaatacttgaatgaagtctctcaggaccttgta
tctcagagctcacctattgcaggccatgtataatgatgagccatctccac
aaaattcacttgcatgtttcagcctttcctagatggattctggccctata
atataataacataatatatgtatataacacatacatataattatatatgc
atatataggtattgattacttttgagtattaacatgattaaattaagaat
agattagtgcatatctcaatctcatcagaggagcttcttgcagtagataa
tgattaacacagaaaacaataactggtcaacatgtcgagaattatacccc
tgatccaaaaaattatttagaaaaagaaatacattggatgatgcaactct
cttgcttatatttcctaattcatgtagtatgttgtgtgttagaaaacaaa
taactccttgtcaggtgctttgaacatctgcatcatctgcatcatctgca
tcatctgcatcatctgcatcatctgcatcatctgcatcatctgcatcatc
tgcatcatctgcatcatctgcatcatctgcatcatctggcctctgtctac
ccagaaatgggaagatgccattttctgctcttcctgtcccatagcacctt
gactctggtcttggccgtagacaacacacagcatgcttttcttgtctgcg
tgaagaggcaaaattccttcattgaacactagagtcctgctttttcacct
tgttagtgttttctcattcactcatatgttccatgaagagtcatcaactt
gtcatactgtatagatagcccctttgtctgtcactgctagtttgggaata
tctctcaagcccatgattaaagatagctatgctgaagcactactgggaag
atgtgagattaagatagaacctactgtagattaggtacttactgtccatt
gaaggaatactg
tcgtccgaatcacatggggaatttcgcctgtggctcagaactaggatagg
gaaaattagttactaacttcaagtagagagggcagcgaacaggtattaat
gaaataaatatctttggctccaggcaaagagttatacagataggtggtat
aacaagatggctactctaggcagagagcttaacaagtaaaaatcaccagc
ttcctataggcagatatgagtgaaagattgaattaattgctttaaagatg
gcataaagatatattgttctaatacgtcttatgggatactatattctgtc
tagtgtgggctccacaagaattctgggtttaaatcctgcattacaaaata
aaaaaggcctaagaataggtagatacagtattttagtttacttcatgtgt
tttggattgttttaaatttcaaaatgggtgtgatgttgtgttttgtggtt
atattatttctcagggagaaaggtcaaaattaaggtttttctggttactg
gctcaaggatatactgatatgggagaaaggttttgtctttgcatttttag
aaaacgtgattagtgtctacacctcccagagtaacatggatcagatttga
gagagggaaaccccctgaagaactagatttcagagaatcaaacaaaaagg
ttatcttgatgatgctaaaattttgttttgagatttgtatattacagact
gtacagccttggtgagtctcatcgtcagacatgctgactgacctgcttga
attctgatgtcttggactttcagctggatcagtcaggacacagacatcag
agactaatacaatcattggtggggcttcttaaggtcaaccaactccccca
ttttccctacccttcccccccaccccttcaaatatcctcaacacctatac
tcagctggagaggttatgaagagtcgtcgctccagttccctgggctttgg
ggcttgaagtggtattataggtttgtcttcaaggaatggtagaatggtca
tattggaacagggagattgccaattgactgcttaccctatcctcatttag
attctttttactgttataatcatacagttcatatttggtaataagtattg
agagcaacaaggtcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102674388_102675532
seq2: B6Ng01-125E21.b_47_1158

seq1  GAATTCTATAAAGTCATCAGGAATTATGAAATCATCAATTTGTCTACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAAAGTCATCAGGAATTATGAAATCATCAATTTGTCTACATA  50

seq1  ACAATGCTACTTGAGAGTACATCTTCATATTGCAGAAAATCTGTCCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTACTTGAGAGTACATCTTCATATTGCAGAAAATCTGTCCAATA  100

seq1  GGGTGGACTAATGTCAAGGAATCATTAGTCTGTATAATAATGTCAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGACTAATGTCAAGGAATCATTAGTCTGTATAATAATGTCAGGAAA  150

seq1  GATATAGCAGCAAGAAGCAATACTTGAATGAAGTCTCTCAGGACCTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGCAGCAAGAAGCAATACTTGAATGAAGTCTCTCAGGACCTTGTA  200

seq1  TCTCAGAGCTCACCTATTGCAGGCCATGTATAATGATGAGCCATCTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAGCTCACCTATTGCAGGCCATGTATAATGATGAGCCATCTCCAC  250

seq1  AAAATTCACTTGCATGTTTCAGCCTTTCCTAGATGGATTCTGGCCCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCACTTGCATGTTTCAGCCTTTCCTAGATGGATTCTGGCCCTATA  300

seq1  ATATAATAACATAATATATGTATATAACACATACATATAATTATATATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAACATAATATATGTATATAACACATACATATAATTATATATGC  350

seq1  ATATATAGGTATTGATTACTTTTGAGTATTAACATGATTAAATTAAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGGTATTGATTACTTTTGAGTATTAACATGATTAAATTAAGAAT  400

seq1  AGATTAGTGCATATCTCAATCTCATCAGAGGAGCTTCTTGCAGTAGATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGTGCATATCTCAATCTCATCAGAGGAGCTTCTTGCAGTAGATAA  450

seq1  TGATTAACACAGAAAACAATAACTGGTCAACATGTCGAGAATTATACCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAACACAGAAAACAATAACTGGTCAACATGTCGAGAATTATACCCC  500

seq1  TGATCCAAAAAATTATTTAGAAAAAGAAATACATTGGATGATGCAACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCAAAAAATTATTTAGAAAAAGAAATACATTGGATGATGCAACTCT  550

seq1  CTTGCTTATATTTCCTAATTCATGTAGTATGTTGTGTGTTAGAAAACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTATATTTCCTAATTCATGTAGTATGTTGTGTGTTAGAAAACAAA  600

seq1  TAACTCCTTGTCAGGTGCTTTGAACATCTGCATCATCTGCATCATCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCTTGTCAGGTGCTTTGAACATCTGCATCATCTGCATCATCTGCA  650

seq1  TCATCTGCATCATCTGCATCATCTGCATCATCTGCATCATCTGCATCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGCATCATCTGCATCATCTGCATCATCTGCATCATCTGCATCATC  700

seq1  TGCATCATCTGCATCATCTGCATCATCTGCATCATCTGGCCTCTGTCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCATCTGCATCATCTGCATCATCTGCATCATCTGGCCTCTGTCTAC  750

seq1  CCAGAAATGGGAAGATGCCATTTTCTGCTCTTCCTGTCCCATAGCACCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGGGAAGATGCCATTTTCTGCTCTTCCTGTCCCATAGCACCTT  800

seq1  GACTCTGGTCTTGGCCGTAAGACAACACACAGCATGCTTTTCTTGTCTGC  850
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GACTCTGGTCTTGGCCGT-AGACAACACACAGCATGCTTTTCTTGTCTGC  849

seq1  GTGAAGAGGCAAAATTCCTTCATTGAACACTAGAGTCCTGCTTTTTCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAGGCAAAATTCCTTCATTGAACACTAGAGTCCTGCTTTTTCACC  899

seq1  TTGTTAGTGTTTTCTCATTCAACCTCAATATGTTCCATGAAGAGTCATCA  950
      |||||||||||||||||||||  ||| |||||||||||||||||||||||
seq2  TTGTTAGTGTTTTCTCATTCA--CTC-ATATGTTCCATGAAGAGTCATCA  946

seq1  ACTTGTCATACTGTTATTAGATAGCCCCTTTGTCCTGTCACTGCTAAGTT  1000
      ||||||||||||||   |||||||||||||||| ||||||||||| ||||
seq2  ACTTGTCATACTGT--ATAGATAGCCCCTTTGT-CTGTCACTGCT-AGTT  992

seq1  TGGGAAATATCTCTCCAAAGCCCATGGTTTAAAGGAATAGCCTATGGCTT  1050
      |||| ||||||||||  |||||||| | ||||||  |||| |||||   |
seq2  TGGG-AATATCTCTC--AAGCCCAT-GATTAAAG--ATAG-CTATG--CT  1033

seq1  GGAGCACTACTGGGGAGGATGTGAGAAATTTTAAAGATAGACACTACTGT  1100
      | ||||||||| |||| |||||||||     | ||||||||  |||||||
seq2  GAAGCACTACT-GGGAAGATGTGAGA-----TTAAGATAGAACCTACTGT  1077

seq1  GAGGAAATTAGGTTACTGTAACTGTCCCCTTTGAAGGAGATACTG  1145
          | |||||| |||  | |||||  || |||||||| ||||||
seq2  ----AGATTAGG-TAC--TTACTGT--CCATTGAAGGA-ATACTG  1112