BAC Information

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BAC

Clone NameB6Ng01-125J15
Chromosome14 (Build37)
Map Location 84,989,345 - 85,118,390
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285, Pcdh17, 9630013A20Rik
Downstream geneLOC629794, LOC668603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125J15.bB6Ng01-125J15.g
ACCDH928191DH928192
length905861
definitionDH928191|Mus musculus domesticus DNA, BAC clone: B6Ng01-125J15, 5' end.DH928192|Mus musculus domesticus DNA, BAC clone: B6Ng01-125J15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,989,345 - 84,990,023)(85,117,871 - 85,118,390)
sequence
gaattccagtaattagtgtagagatccactctgaagatcagtagtgtaga
tttctcctgaggactgtggaagtttacagtaggctttctgcaaggaaaaa
ggtcaaagagaacaggatgatgatacatgtggttagggtttttcagaaat
gaactgagaggtttttgaacaaattcatacaaatgaacatatagaattaa
atgagtatatatggttttactcaaaccacataaaccacacatgcacatat
atgcatgcacactcattaattgttctttctagttctattgttgtaataaa
acattctgatcaaaagctacttaagggggaaatgatttatttaagttcag
aattctaagtgacagtccagtacattggaaatgccagacaaaaggaactc
aaacatctcaccccatcacattatggtcaagagcagaacaaatgaatata
tttatatatatattatatatattatttatatatacatatgtctgcatgta
ttatacatgtggagaagatcaattttatgacctcatgttggattagagat
agcagtcttttggtattttttattgtttcccctctgcaaatatctttgtc
catgcttttcttttcatatagatattgatcatatttatatgtgtatgtct
gtgtgtgtgtatatatatgtgtgtgtataagaagggatgagtagggagct
agccaaaccaaggatgcatgaggaaacgctaggaacctctactagtctgc
aagttctttaaatataatatataaaaaaagaatttgaacagaagtatctt
ggatggataaataatgctgctccaagaaaaaaaaaatgggttcttaaatg
aaaatctatctccaggaattggttacttttgatttaatatttggtcagag
aagcc
gaattctttcatgaagtctcattcgggtttcaacaaagaaagtaaaggat
gaaggcatatgtcataagaaagcaaatgctgtcagagtagaagtgagttg
acaaaattggttcatcattctcttgagagaaaatgcaatgcatatttaat
tcactcacaagcatttgtggcaattgattgaaaataaaatttcccgtaat
tttagaagaaaaagagagaaataaaataattaaattagctgctttaaaat
acccaagtttagaaaattttaaagcattaactataggacatgcatggtat
gcactcattaataagtggatattagacaaagaaatacagattacccaaga
tgcaatccatagaactcaagaaggataacaagcaaaagggcctaagtgaa
gatgcctcaatccaatttgggaggaagaagaaagcaatcattgggagttg
ggggcctgagggaagaagaaacctgggtgggaaagaagacaggaatggga
aaaggggagcataatcaggtttggagggaatggaatggagtgcggagtgc
cagcagaatgaatggaaatatgcaacctccaacctcaggaggtaggaggg
gggaccctctagaatgtaccaaaaaactggggaggtgagagactctcggg
actcaaagggagggaccttagatggatgatttgctctacagaggagagag
ggaacttgtagagtccacctccagcagaaagacaggggatcaagtgtcaa
tgccatcccatagtcaaaactctgacccagaattgtttctctctgaaaga
actgcagaacaaaatggggaacataagggaaaggagtccagcgacaggcc
caaattgaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84989345_84990023
seq2: B6Ng01-125J15.b_49_727

seq1  GAATTCCAGTAATTAGTGTAGAGATCCACTCTGAAGATCAGTAGTGTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTAATTAGTGTAGAGATCCACTCTGAAGATCAGTAGTGTAGA  50

seq1  TTTCTCCTGAGGACTGTGGAAGTTTACAGTAGGCTTTCTGCAAGGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTGAGGACTGTGGAAGTTTACAGTAGGCTTTCTGCAAGGAAAAA  100

seq1  GGTCAAAGAGAACAGGATGATGATACATGTGGTTAGGGTTTTTCAGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAAGAGAACAGGATGATGATACATGTGGTTAGGGTTTTTCAGAAAT  150

seq1  GAACTGAGAGGTTTTTGAACAAATTCATACAAATGAACATATAGAATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAGAGGTTTTTGAACAAATTCATACAAATGAACATATAGAATTAA  200

seq1  ATGAGTATATATGGTTTTACTCAAACCACATAAACCACACATGCACATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTATATATGGTTTTACTCAAACCACATAAACCACACATGCACATAT  250

seq1  ATGCATGCACACTCATTAATTGTTCTTTCTAGTTCTATTGTTGTAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGCACACTCATTAATTGTTCTTTCTAGTTCTATTGTTGTAATAAA  300

seq1  ACATTCTGATCAAAAGCTACTTAAGGGGGAAATGATTTATTTAAGTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTGATCAAAAGCTACTTAAGGGGGAAATGATTTATTTAAGTTCAG  350

seq1  AATTCTAAGTGACAGTCCAGTACATTGGAAATGCCAGACAAAAGGAACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAAGTGACAGTCCAGTACATTGGAAATGCCAGACAAAAGGAACTC  400

seq1  AAACATCTCACCCCATCACATTATGGTCAAGAGCAGAACAAATGAATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTCACCCCATCACATTATGGTCAAGAGCAGAACAAATGAATATA  450

seq1  TTTATATATATATTATATATATTATTTATATATACATATGTCTGCATGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATATATTATATATATTATTTATATATACATATGTCTGCATGTA  500

seq1  TTATACATGTGGAGAAGATCAATTTTATGACCTCATGTTGGATTAGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACATGTGGAGAAGATCAATTTTATGACCTCATGTTGGATTAGAGAT  550

seq1  AGCAGTCTTTTGGTATTTTTTATTGTTTCCCCTCTGCAAATATCTTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCTTTTGGTATTTTTTATTGTTTCCCCTCTGCAAATATCTTTGTC  600

seq1  CATGCTTTTCTTTTCATATAGATATTGATCATATTTATATGTGTATGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTTTCTTTTCATATAGATATTGATCATATTTATATGTGTATGTCT  650

seq1  GTGTGTGTGTATATATATGTGTGTGTATA  679
      |||||||||||||||||||||||||||||
seq2  GTGTGTGTGTATATATATGTGTGTGTATA  679

seq1: chr14_85117871_85118390
seq2: B6Ng01-125J15.g_64_583 (reverse)

seq1  ACCTGATTATGCTCCCCTTTTCCCATTCCTGTCTTCTTTCCCACCCAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATTATGCTCCCCTTTTCCCATTCCTGTCTTCTTTCCCACCCAGGT  50

seq1  TTCTTCTTCCCTCAGGCCCCCAACTCCCAATGATTGCTTTCTTCTTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCCCTCAGGCCCCCAACTCCCAATGATTGCTTTCTTCTTCCTC  100

seq1  CCAAATTGGATTGAGGCATCTTCACTTAGGCCCTTTTGCTTGTTATCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTGGATTGAGGCATCTTCACTTAGGCCCTTTTGCTTGTTATCCTT  150

seq1  CTTGAGTTCTATGGATTGCATCTTGGGTAATCTGTATTTCTTTGTCTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTCTATGGATTGCATCTTGGGTAATCTGTATTTCTTTGTCTAAT  200

seq1  ATCCACTTATTAATGAGTGCATACCATGCATGTCCTATAGTTAATGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTTATTAATGAGTGCATACCATGCATGTCCTATAGTTAATGCTTT  250

seq1  AAAATTTTCTAAACTTGGGTATTTTAAAGCAGCTAATTTAATTATTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTCTAAACTTGGGTATTTTAAAGCAGCTAATTTAATTATTTTAT  300

seq1  TTCTCTCTTTTTCTTCTAAAATTACGGGAAATTTTATTTTCAATCAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTTTTTCTTCTAAAATTACGGGAAATTTTATTTTCAATCAATTG  350

seq1  CCACAAATGCTTGTGAGTGAATTAAATATGCATTGCATTTTCTCTCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATGCTTGTGAGTGAATTAAATATGCATTGCATTTTCTCTCAAGA  400

seq1  GAATGATGAACCAATTTTGTCAACTCACTTCTACTCTGACAGCATTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATGAACCAATTTTGTCAACTCACTTCTACTCTGACAGCATTTGCT  450

seq1  TTCTTATGACATATGCCTTCATCCTTTACTTTCTTTGTTGAAACCCGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGACATATGCCTTCATCCTTTACTTTCTTTGTTGAAACCCGAAT  500

seq1  GAGACTTCATGAAAGAATTC  520
      ||||||||||||||||||||
seq2  GAGACTTCATGAAAGAATTC  520