BAC Information

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BAC

Clone NameB6Ng01-126J08
Chromosome14 (Build37)
Map Location 85,700,674 - 85,701,638
singlet/doubletsinglet
Overlap genenone
Upstream genePcdh17, 9630013A20Rik, LOC629794
Downstream geneLOC668603, LOC100043301, EG629815
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126J08.bB6Ng01-126J08.g
ACCDH928915DH928916
length1,164942
definitionDH928915|Mus musculus domesticus DNA, BAC clone: B6Ng01-126J08, 5' end.DH928916|Mus musculus domesticus DNA, BAC clone: B6Ng01-126J08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatacaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggaggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtgttacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaaaatataagatataatttgctaaacacatgaaactcaag
aagaatgaagattgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggacctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaagagtaaagggatctgcaaccctat
aggtggacacattatgactaccagtacccggagctcttgactctagctgc
atatatatcaaagatgtctagtcgcatcactggaagaaagccattgactg
caatttatatgccagtacaggaaaccagggccaaagggaatggttggcaa
ggggaaatggggat
gaattcagcagaaattttattccatatgtacttgcttaaaaattatgata
ttgacattattcttattaaaattattaagcttacaacatgtaattacatc
gatattagaagaatatcactgcataattaaataaatacaatgtgttcttt
gaatatgctaatatgattatttctgaaaaacattcagataatgttcattt
ttaaaatactcatatgttgtgaagtcttactgctttgaaaagaaattctt
acaggaaacattcattacacttaaagcacaagcagagtgctgttcttaga
ttcacaaatatacaaagactatctatgtgaatgtatttttaggtagcaat
gccttaacgaagtggagaatagattatacctttaaggaagaagaaatagt
ctctacataattctaacttgaaaaagtttaacgtgcttgatggcagcatt
agcaacattttctttcatttccctgtgagactaaaagaagaggcagcata
ttgttgctgctctgctctttcttcttccttgggctttgattgtaaggcca
gtgtgcctttttcatcttcctacagatctgactgcaaaaatctctgagga
aagctctctgtgcaggaaatgatacggtaaaaagaaagttcttccatttt
ctatataatttttttttcctctgtgagtctgtgatcagactctgagtttt
attatgattcctggttgcctaccaattttctttcacgaattatattcctg
ccttctaagttggttaggagccacatagctgcaactagagacttcttctt
tgagtgtccctctaatattacattatttcttaataaaggggttttacagt
gaatgaagatgaaattatagatgatgttttctcgatttatgatacagcat
caggacacatttgttatgccactaaacacggaacctatctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_85700674_85701638
seq2: B6Ng01-126J08.g_66_1007

seq1  GAATTCAGCAGAAATTTTATTCCATATGTACTTGCTTAAAAATTATGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGAAATTTTATTCCATATGTACTTGCTTAAAAATTATGATA  50

seq1  TTGACATTATTCTTATTAAAATTATTAAGCTTACAACATGTAATTACATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTATTCTTATTAAAATTATTAAGCTTACAACATGTAATTACATC  100

seq1  GATATTAGAAGAATATCACTGCATAATTAAATAAATACAATGTGTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGAAGAATATCACTGCATAATTAAATAAATACAATGTGTTCTTT  150

seq1  GAATATGCTAATATGATTATTTCTGAAAAACATTCAGATAATGTTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGCTAATATGATTATTTCTGAAAAACATTCAGATAATGTTCATTT  200

seq1  TTAAAATACTCATATGTTGTGAAGTCTTACTGCTTTGAAAAGAAATTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATACTCATATGTTGTGAAGTCTTACTGCTTTGAAAAGAAATTCTT  250

seq1  ACAGGAAACATTCATTACACTTAAAGCACAAGCAGAGTGCTGTTCTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAACATTCATTACACTTAAAGCACAAGCAGAGTGCTGTTCTTAGA  300

seq1  TTCACAAATATACAAAGACTATCTATGTGAATGTATTTTTAGGTAGCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAATATACAAAGACTATCTATGTGAATGTATTTTTAGGTAGCAAT  350

seq1  GCCTTAACGAAGTGGAGAATAGATTATACCTTTAAGGAAGAAGAAATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAACGAAGTGGAGAATAGATTATACCTTTAAGGAAGAAGAAATAGT  400

seq1  CTCTACATAATTCTAACTTGAAAAAGTTTAACGTGCTTGATGGCAGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACATAATTCTAACTTGAAAAAGTTTAACGTGCTTGATGGCAGCATT  450

seq1  AGCAACATTTTCTTTCATTTCCCTGTGAGACTAAAAGAAGAGGCAGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACATTTTCTTTCATTTCCCTGTGAGACTAAAAGAAGAGGCAGCATA  500

seq1  TTGTTGCTGCTCTGCTCTTTCTTCTTCCTTGGGCTTTGATTGTAAGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCTGCTCTGCTCTTTCTTCTTCCTTGGGCTTTGATTGTAAGGCCA  550

seq1  GTGTGCCTTTTTCATCTTCCTACAGATCTGACTGCAAAAATCTCTGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCCTTTTTCATCTTCCTACAGATCTGACTGCAAAAATCTCTGAGGA  600

seq1  AAGCTCTCTGTGCAGGAAATGATACGGTAAAAAGAAAGTTCTTCCATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTCTGTGCAGGAAATGATACGGTAAAAAGAAAGTTCTTCCATTTT  650

seq1  CTATATAATTTTTTTTTCCTCTGTGAGTCTGTGATCAGACTCTGAGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAATTTTTTTTTCCTCTGTGAGTCTGTGATCAGACTCTGAGTTTT  700

seq1  ATTATGATTCCTGGTTGCCTACCAATTTTCTTTCACGAATTATAATTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTATGATTCCTGGTTGCCTACCAATTTTCTTTCACGAATTAT-ATTCCT  749

seq1  GCCTTCTAAGTTGGTTAGGAG-CACATAGCTGCAAACTAGAAGGACTTCC  799
      ||||||||||||||||||||| ||||||||||| |||||||  ||||| |
seq2  GCCTTCTAAGTTGGTTAGGAGCCACATAGCTGC-AACTAGA--GACTT-C  795

seq1  TTCTTTGAGTGTCCCTCTAATATTACATTATTTTCTTTAAATAAAGGGGG  849
      |||||||||||||||||||||||||||||| ||||||  |||||| ||||
seq2  TTCTTTGAGTGTCCCTCTAATATTACATTA-TTTCTT--AATAAA-GGGG  841

seq1  TTTTACAGTGAAATGAAAGATGAAATTATAGATGGATGTTTTCTTCGAAT  899
      |||||||||| |||| ||||||||||||||||| ||||||||| ||||  
seq2  TTTTACAGTG-AATG-AAGATGAAATTATAGAT-GATGTTTTC-TCGA--  885

seq1  TTAATGAATACCAAGCAATCAGGGACACATTTGTTAAATGCCACTAAAAC  949
      || ||| ||||  ||| |||| |||||||||||||  |||||||| ||||
seq2  TTTATG-ATAC--AGC-ATCA-GGACACATTTGTT--ATGCCACT-AAAC  927

seq1  ACAGAACACTATCTAG  965
      || |||| ||||||||
seq2  ACGGAAC-CTATCTAG  942