BAC Information

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BAC

Clone NameB6Ng01-127L19
Chromosome14 (Build37)
Map Location 34,994,824 - 35,137,761
singlet/doubletdoublet
Overlap geneGprin2, Syt15, 3110001K24Rik, LOC623142, Glud1
Upstream geneEG622657, Arhgap22, Mapk8, LOC100040079, LOC665681, Frmpd2, LOC100040093, Ptpn20, Gdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163
Downstream geneLOC100041231, 2200001I15Rik, Sncg, Mmrn2, Bmpr1a, 9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik, Wapal, LOC100041341, Grid1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127L19.bB6Ng01-127L19.g
ACCDH929774DH929775
length1,1561,038
definitionDH929774|Mus musculus domesticus DNA, BAC clone: B6Ng01-127L19, 5' end.DH929775|Mus musculus domesticus DNA, BAC clone: B6Ng01-127L19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,994,824 - 34,995,994)(35,136,723 - 35,137,761)
sequence
gaattcctgctccaaattggaaagaattttcaggttcttagatcttaaat
attgatgtgcgttgctttgggtccccatggcttttttttttccagatgag
ggggcttccctgatatgagtggagacctgcaaatctgcagagcaaaagtg
tactcagagctacttttcagtgttcagcttccccctcgctggagctttga
tccggtaggctacttcaggtaggccgcattttgatgttttaaaactctgt
gcttcctttgaggccatcctcaagaatgtgtgctggggaacaaacctaag
agccaatgtccccatctctgagaagttcacaatggagtaaagaaggaaaa
gttctaaattattataaaggtaacttatttgccagatgtaattgtcatct
agaaggcttactgctgaatagcctcaccctttctaagttctttctgagct
ctggctggctggttcaactcagctgtcctggctcaaactcctctccaagc
tgactgattcaaactgtcttctctcagcttctcgctgaattgctctgctt
ggcctcaaactcactccaacaatctgttctaatcttctggctccttctca
ttttctggtttgttctttcttcacctgcaacctatctctgtaaaactgct
ttctctgtgtctctctgtctatctccccctccccctcccctctctccctc
ctgctgctgctgctgctattactactgctctcttaagccagctgttcatt
cctgtaatattttcttgagtagcctctctttcctgtgctgttctcatgag
agttgggtgtatcctatcaaatctttctctgattcatcactttgtctgcc
actcaataagacatcacttttggaacacggctgcttccttctacaaatta
acctgactttcattgtttggattaaaggtgtatactaaagatgtgaagga
tgtgtctgtattccagcctggtcatactgtatctaaagtgtgtctgcatc
agcttgctcacactgaacctagaaagtctttggatatgatcctttgcaag
cagcatattgctggatgaaaattctctacattattccctcaagaaggaac
atactcttactcagtaaggaacgattgtgagttttgtgcttaggaaggat
tttaag
gaattcaaggcaaccccgtgaagccctgtctcagtataaaaagtaaagag
agggttggggagatacagctcaacgggagagcatctgcctagcatgtgag
gactagagtcttggttcagagaaggcatgactgagggagtcttactggct
ggccttgaacttgctatctagtctagactggctatgaacttagagatcca
cctacacctgccagacgtggtgtttgtaactccatcactgggaataccga
ggcaaaagaatgtggaaacaaataaggctatataggtataggctataaag
ggaaactttgtctaaaatgtgtatgtgtgtgtgcataatgcagaacatga
cagtgcgtcctgcaatcccagtacctaggaggtaaaagaagccatcctag
ggtgagtacacacacacacacacacacacacacacacacacacaagtacc
aggtcagccagggcttcaaagtaataacatcctcaatcccccctcttttc
ggtttctgtcgttctctctcatacactcacacaaaacagttataactata
tggatcctgaggtggtttcaatagggatggcccctatagactcatgtgtt
tgaatgcttggcccatagggaatggcactattacggaggtgtggccttgt
tggaggaagtgtgtcactgtggaggcggggtttgaagttttctatgctca
agctgggcctagtgtggcagtctcttgctgactgtgaatcaggatgtaga
ccttcagcttcttctgcagcacatgtctgcctgcatgctgccatgcttcc
tgccatgttgacaatggactaaaccactgaaactgtagctagcccaatta
atgtctttctttataaagctgcttgggggtcaagtgttctctctcataag
cagtaaaccttagggcaagacctccatgggtcatcctatacttcatttaa
tgtaaagtttaacattgggtgtgcgcttgtgccttgtaccctaagtctca
gagagacagctgtgaatgagtcattcgtgggttaggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_34994824_34995994
seq2: B6Ng01-127L19.b_47_1202

seq1  GAATTCCTGCTCCAAATTGGAAAGAATTTTCAGGTTCTTAGATCTTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTCCAAATTGGAAAGAATTTTCAGGTTCTTAGATCTTAAAT  50

seq1  ATTGATGTGCGTTGCTTTGGGTCCCCATGGCTTTTTTTTTTCCAGATGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGTGCGTTGCTTTGGGTCCCCATGGCTTTTTTTTTTCCAGATGAG  100

seq1  GGGGCTTCCCTGATATGAGTGGAGACCTGCAAATCTGCAGAGCAAAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTCCCTGATATGAGTGGAGACCTGCAAATCTGCAGAGCAAAAGTG  150

seq1  TACTCAGAGCTACTTTTCAGTGTTCAGCTTCCCCCTCGCTGGAGCTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGAGCTACTTTTCAGTGTTCAGCTTCCCCCTCGCTGGAGCTTTGA  200

seq1  TCCGGTAGGCTACTTCAGGTAGGCCGCATTTTGATGTTTTAAAACTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGTAGGCTACTTCAGGTAGGCCGCATTTTGATGTTTTAAAACTCTGT  250

seq1  GCTTCCTTTGAGGCCATCCTCAAGAATGTGTGCTGGGGAACAAACCTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTTTGAGGCCATCCTCAAGAATGTGTGCTGGGGAACAAACCTAAG  300

seq1  AGCCAATGTCCCCATCTCTGAGAAGTTCACAATGGAGTAAAGAAGGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATGTCCCCATCTCTGAGAAGTTCACAATGGAGTAAAGAAGGAAAA  350

seq1  GTTCTAAATTATTATAAAGGTAACTTATTTGCCAGATGTAATTGTCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAATTATTATAAAGGTAACTTATTTGCCAGATGTAATTGTCATCT  400

seq1  AGAAGGCTTACTGCTGAATAGCCTCACCCTTTCTAAGTTCTTTCTGAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTTACTGCTGAATAGCCTCACCCTTTCTAAGTTCTTTCTGAGCT  450

seq1  CTGGCTGGCTGGTTCAACTCAGCTGTCCTGGCTCAAACTCCTCTCCAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGGCTGGTTCAACTCAGCTGTCCTGGCTCAAACTCCTCTCCAAGC  500

seq1  TGACTGATTCAAACTGTCTTCTCTCAGCTTCTCGCTGAATTGCTCTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATTCAAACTGTCTTCTCTCAGCTTCTCGCTGAATTGCTCTGCTT  550

seq1  GGCCTCAAACTCACTCCAACAATCTGTTCTAATCTTCTGGCTCCTTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAAACTCACTCCAACAATCTGTTCTAATCTTCTGGCTCCTTCTCA  600

seq1  TTTTCTGGTTTGTTCTTTCTTCACCTGCAACCTATCTCTGTAAAACTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGTTTGTTCTTTCTTCACCTGCAACCTATCTCTGTAAAACTGCT  650

seq1  TTCTCTGTGTCTCTCTGTCTATCTCCCCCTCCCCCTCCCCTCTCTCCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGTCTCTCTGTCTATCTCCCCCTCCCCCTCCCCTCTCTCCCTC  700

seq1  CTGCTGCTGCTGCTGCTATTACTACTGCTCTCTTAAGCCAGCTGTTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCTGCTGCTGCTATTACTACTGCTCTCTTAAGCCAGCTGTTCATT  750

seq1  CCTGTAATATTTTCTTGAGTAGCCTCTCTTTCCTGTGCTGTTCTCATGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAATATTTTCTTGAGTAGCCTCTCTTTCCTGTGCTGTTCTCATGAG  800

seq1  AGTTGGGTGTATCCTATCAAATCTTTCTCTGATTCATCACTTTGTCTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGTGTATCCTATCAAATCTTTCTCTGATTCATCACTTTGTCTGCC  850

seq1  ACTCAATAAGACATCACTTTT-GAACACGGCTGCTTCCTTCTACAAATTA  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTCAATAAGACATCACTTTTGGAACACGGCTGCTTCCTTCTACAAATTA  900

seq1  ACCTGACTTTCATTGTTTGGGATTAAAGGTGTATACTAAAGATGTGAAGG  949
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACCTGACTTTCATTGTTT-GGATTAAAGGTGTATACTAAAGATGTGAAGG  949

seq1  ATGTGTCTGTATTCCAGCCTGGTCATACTGTAATCTAAAGTGTGTCTGCA  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGTGTCTGTATTCCAGCCTGGTCATACTGT-ATCTAAAGTGTGTCTGCA  998

seq1  TTCCAGCTGGCTCACACTG-ACCTAGAAGGTCTTTGGATATGATCCCTTG  1048
      |  ||||| |||||||||| |||||||| ||||||||||||||||| |||
seq2  T--CAGCTTGCTCACACTGAACCTAGAAAGTCTTTGGATATGATCCTTTG  1046

seq1  CCAAAGCAGCCATATTGCTGGATGAAAATTCCTCTACAATTATTCCCTCA  1098
      |  |||||| |||||||||||||||||||| |||||| ||||||||||||
seq2  C--AAGCAG-CATATTGCTGGATGAAAATT-CTCTAC-ATTATTCCCTCA  1091

seq1  AGAAAGAACATACTCTTTACTCAGTTAAAGGAAAGGGATTTGTGAGTTTT  1148
      |||| |||||||||| |||||||||  |||||| |    |||||||||||
seq2  AGAAGGAACATACTC-TTACTCAGT--AAGGAACG---ATTGTGAGTTTT  1135

seq1  GTGCTTAGGAAAGGATATTTAAG  1171
      ||||||||| |||||| ||||||
seq2  GTGCTTAGG-AAGGAT-TTTAAG  1156

seq1: chr14_35136723_35137761
seq2: B6Ng01-127L19.g_69_1106 (reverse)

seq1  GACCTAACCCA-GATTGACCTCATTCTCAGCTGTCCTCCTGAGACTTAGG  49
      ||||||||||| || ||| ||||||| ||||||||   ||||||||||||
seq2  GACCTAACCCACGAATGA-CTCATTCACAGCTGTCTCTCTGAGACTTAGG  49

seq1  GTTACAGGCACAGCCGCCACACCC-ATGTTAAAACTTTACATTTAAATGA  98
      ||   |||||||  || ||||||| ||||| |||||||||| ||||||| 
seq2  GTACAAGGCACAAGCG-CACACCCAATGTT-AAACTTTACA-TTAAATG-  95

seq1  AAGTATAGGATGACCCATGGA-GTC-TGCCCTAGGGTTTTACTGC-TATG  145
      ||||||||||||||||||||| ||| ||||||| || |||||||| ||||
seq2  AAGTATAGGATGACCCATGGAGGTCTTGCCCTAAGG-TTTACTGCTTATG  144

seq1  A-AGAGACACCTTGACCCC--AGCAGCTTTTATAAAGGAAGACATTTAAT  192
      | |||||   |||||||||  |||||| ||||||||| |||||| |||||
seq2  AGAGAGAACACTTGACCCCCAAGCAGC-TTTATAAAGAAAGACA-TTAAT  192

seq1  TGGGCTAGCTAACAGTTTCAGTGGTTTAGTCCATTGTCAACATGGCAGGA  242
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTAGCT-ACAGTTTCAGTGGTTTAGTCCATTGTCAACATGGCAGGA  241

seq1  AGCATGGCAGCATGCAGGCAGACATGGTGCTGCAGAAGAAGCTG-AGGTC  291
      ||||||||||||||||||||||||| |||||||||||||||||| |||||
seq2  AGCATGGCAGCATGCAGGCAGACAT-GTGCTGCAGAAGAAGCTGAAGGTC  290

seq1  TACATCCTGATTCACAGTCAGCAAGAGACTGCCACACTAGGCCCAGCTTG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCCTGATTCACAGTCAGCAAGAGACTGCCACACTAGGCCCAGCTTG  340

seq1  AGCATAGAAAACTTCAAACCCCGCCTCCACAGTGACACACTTCCTCCAAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGAAAACTTCAAACCCCGCCTCCACAGTGACACACTTCCTCCAAC  390

seq1  AAGGCCACACCTCCGTAATAGTGCCATTCCCTATGGGCCAAGCATTCAAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCACACCTCCGTAATAGTGCCATTCCCTATGGGCCAAGCATTCAAA  440

seq1  CACATGAGTCTATAGGGGCCATCCCTATTGAAACCACCTCAGGATCCATA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAGTCTATAGGGGCCATCCCTATTGAAACCACCTCAGGATCCATA  490

seq1  TAGTTATAACTGTTTTGTGTGAGTGTATGAGAGAGAACGACAGAAACCGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATAACTGTTTTGTGTGAGTGTATGAGAGAGAACGACAGAAACCGA  540

seq1  AAAGAGGGGGGATTGAGGATGTTATTACTTTGAAGCCCTGGCTGACCTGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGGGGGATTGAGGATGTTATTACTTTGAAGCCCTGGCTGACCTGG  590

seq1  TACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTCACCCT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACTCACCCT  640

seq1  AGGATGGCTTCTTTTACCTCCTAGGTACTGGGATTGCAGGACGCACTGTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGGCTTCTTTTACCTCCTAGGTACTGGGATTGCAGGACGCACTGTC  690

seq1  ATGTTCTGCATTATGCACACACACATACACATTTTAGACAAAGTTTCCCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGCATTATGCACACACACATACACATTTTAGACAAAGTTTCCCT  740

seq1  TTATAGCCTATACCTATATAGCCTTATTTGTTTCCACATTCTTTTGCCTC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGCCTATACCTATATAGCCTTATTTGTTTCCACATTCTTTTGCCTC  790

seq1  GGTATTCCCAGTGATGGAGTTACAAACACCACGTCTGGCAGGTGTAGGTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCCCAGTGATGGAGTTACAAACACCACGTCTGGCAGGTGTAGGTG  840

seq1  GATCTCTAAGTTCATAGCCAGTCTAGACTAGATAGCAAGTTCAAGGCCAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTAAGTTCATAGCCAGTCTAGACTAGATAGCAAGTTCAAGGCCAG  890

seq1  CCAGTAAGACTCCCTCAGTCATGCCTTCTCTGAACCAAGACTCTAGTCCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAGACTCCCTCAGTCATGCCTTCTCTGAACCAAGACTCTAGTCCT  940

seq1  CACATGCTAGGCAGATGCTCTCCCGTTGAGCTGTATCTCCCCAACCCTCT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCTAGGCAGATGCTCTCCCGTTGAGCTGTATCTCCCCAACCCTCT  990

seq1  CTTTACTTTTTATACTGAGACAGGGCTTCACGGGGTTGCCTTGAATTC  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTTTTATACTGAGACAGGGCTTCACGGGGTTGCCTTGAATTC  1038