BAC Information

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BAC

Clone NameB6Ng01-127N12
Chromosome14 (Build37)
Map Location 113,788,778 - 113,912,371
singlet/doubletdoublet
Overlap geneLOC100043510
Upstream geneEG223186, LOC100043509, Tpm3-rs7
Downstream geneLOC382947, LOC668791, LOC100043821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127N12.bB6Ng01-127N12.g
ACCDH929854DH929855
length883980
definitionDH929854|Mus musculus domesticus DNA, BAC clone: B6Ng01-127N12, 5' end.DH929855|Mus musculus domesticus DNA, BAC clone: B6Ng01-127N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,911,833 - 113,912,371)(113,788,778 - 113,789,692)
sequence
gaattcacagcaggtgtggttgtctgcgggaccacaaacaaacaacaaaa
actatacaagatagaattagtaaacatttcagcatcagtgtggtaggtgt
ccattaggccccaccacttaaaaagaaactatttgcacttactagatgct
aagaggaagattctcggttttccatgagtctgattctgctaggtaactca
aagttccctggatgagtcataaacccattggcatagaggaaaaactagtt
caattatgtgggtcattgccagcatctgctgtcacctgagttttatctta
gccattctgacttgtgtgaggtggaatctcagggttgttttgatttacat
ttccctgatgactaagagtgttagacatttttttaggtgcttctcagtca
tttagtattcctcacttgagaattctttgtttagctctgttccccacttt
taatatggttatttggttttctggagtctaacttcttgaattctttgtat
atgttggttattagccctctattgaatgtagggttggtaaagatcttctc
ccaatctgttggttgcttttttgtcctattgacagtgtcctttgccttaa
gaagctttgtaattttatgagggcccatttgtcaattcttgatcttatag
caacaagctattggttttctgttaaggaaaattttctctgtgctcatgtg
tttgagactcttccccactttcttttctattactttcagtatatctggtt
ttatgtggaggtacttgaaacacttggacttgagcaagaaatgtaaataa
aagaaatatcaataaaaaaataaattaaataaataaattatgtgggtcat
aaaaacataacaaaagttcaaggaacggctggt
gaattcttaattgaggaatctcaaatgtctgagaaccaactaaagaaatg
taaaacaatccttagtaatcagagcaatacaaatcaaatgaccctgagat
tcacctcacaccagtccgagttgctatcaaaaactcagatgacagcagat
gttggtgagaatgtggagaaaaaaggaacactcctccattgctggtggga
ttgcaagctggtacaaccactttggaaatcagtctcgtggttcctcagaa
aatcttttataaacataataaagttataagtcattatcttagcggttaga
actttgatatttaattatatagatacatacatacatacagatagatagat
agatagatagatagatagatacaaacccttagaaaataagtgcttgatat
acactaatatttccaagtctatgaatccttacattctaattttttattat
taattggttattttatttatttacatttcaaatgtcccacacccaggttt
ctcctccttagctcccccatcctatctcccatcccttttgtctctaagaa
agttatcccccatccacccatgcattcctgccttacacctctagcatcca
cctacactggggcatcaagcctccacaggaccaagggtctcccctaccat
tgatgcctgataaggccatactgtgctaaaaatatagttggagccatgga
cccctccatgtgtactctttcactggtggtttagtccctgggaactctgg
agggccgtgggtcaagtaaattgatattgtttttcttcctgtagggtttc
agtctcctttagtttctttgctccttcccctaattcctccattaagatga
gttacatggttggctgtgaatatctgcatctgcttttgtcagacgctggt
atagtctctcagagacatcatactgggctctatctgcagcacttcttgac
atcagcaataagtcagggtatcatatttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113911833_113912371
seq2: B6Ng01-127N12.b_395_932 (reverse)

seq1  ACCAGGCCGTCCTTGAACTTTTGTTATGTTTTTATGACCCACATAATTTA  50
      ||||| |  |||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCGTTCCTTGAACTTTTGTTATGTTTTTATGACCCACATAATTTA  50

seq1  TTTAATTAATTTATTTTTTTATTTGATATTTCTTTTATTTACATTTCTTG  100
      |||| |||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTATTTAATTTATTTTTTTA-TTGATATTTCTTTTATTTACATTTCTTG  99

seq1  CTCAAGTCCAAGTGTTTCAAGTACCTCCACATAAAACCAGATATACTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTCCAAGTGTTTCAAGTACCTCCACATAAAACCAGATATACTGAA  149

seq1  AGTAATAGAAAAGAAAGTGGGGAAGAGTCTCAAACACATGAGCACAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAGAAAAGAAAGTGGGGAAGAGTCTCAAACACATGAGCACAGAGA  199

seq1  AAATTTTCCTTAACAGAAAACCAATAGCTTGTTGCTATAAGATCAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCCTTAACAGAAAACCAATAGCTTGTTGCTATAAGATCAAGAAT  249

seq1  TGACAAATGGGCCCTCATAAAATTACAAAGCTTCTTAAGGCAAAGGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATGGGCCCTCATAAAATTACAAAGCTTCTTAAGGCAAAGGACAC  299

seq1  TGTCAATAGGACAAAAAAGCAACCAACAGATTGGGAGAAGATCTTTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATAGGACAAAAAAGCAACCAACAGATTGGGAGAAGATCTTTACCA  349

seq1  ACCCTACATTCAATAGAGGGCTAATAACCAACATATACAAAGAATTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTACATTCAATAGAGGGCTAATAACCAACATATACAAAGAATTCAAG  399

seq1  AAGTTAGACTCCAGAAAACCAAATAACCATATTAAAAGTGGGGAACAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGACTCCAGAAAACCAAATAACCATATTAAAAGTGGGGAACAGAG  449

seq1  CTAAACAAAGAATTCTCAAGTGAGGAATACTAAATGACTGAGAAGCACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAAGAATTCTCAAGTGAGGAATACTAAATGACTGAGAAGCACCT  499

seq1  AAAAAAATGTCTAACACTCTTAGTCATCAGGGAAATGTA  539
      |||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATGTCTAACACTCTTAGTCATCAGGGAAATGTA  538

seq1: chr14_113788778_113789692
seq2: B6Ng01-127N12.g_69_983

seq1  GAATTCTTAATTGAGGAATCTCAAATGTCTGAGAACCAACTAAAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATTGAGGAATCTCAAATGTCTGAGAACCAACTAAAGAAATG  50

seq1  TAAAACAATCCTTAGTAATCAGAGCAATACAAATCAAATGACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAATCCTTAGTAATCAGAGCAATACAAATCAAATGACCCTGAGAT  100

seq1  TCACCTCACACCAGTCCGAGTTGCTATCAAAAACTCAGATGACAGCAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCACACCAGTCCGAGTTGCTATCAAAAACTCAGATGACAGCAGAT  150

seq1  GTTGGTGAGAATGTGGAGAAAAAAGGAACACTCCTCCATTGCTGGTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGAGAATGTGGAGAAAAAAGGAACACTCCTCCATTGCTGGTGGGA  200

seq1  TTGCAAGCTGGTACAACCACTTTGGAAATCAGTCTCGTGGTTCCTCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGCTGGTACAACCACTTTGGAAATCAGTCTCGTGGTTCCTCAGAA  250

seq1  AATCTTTTATAAACATAATAAAGTTATAAGTCATTATCTTAGCGGTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTATAAACATAATAAAGTTATAAGTCATTATCTTAGCGGTTAGA  300

seq1  ACTTTGATATTTAATTATATAGATACATACATACATACAGATAGATAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGATATTTAATTATATAGATACATACATACATACAGATAGATAGAT  350

seq1  AGATAGATAGATAGATAGATACAAACCCTTAGAAAATAAGTGCTTGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATACAAACCCTTAGAAAATAAGTGCTTGATAT  400

seq1  ACACTAATATTTCCAAGTCTATGAATCCTTACATTCTAATTTTTTATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAATATTTCCAAGTCTATGAATCCTTACATTCTAATTTTTTATTAT  450

seq1  TAATTGGTTATTTTATTTATTTACATTTCAAATGTCCCACACCCAGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGGTTATTTTATTTATTTACATTTCAAATGTCCCACACCCAGGTTT  500

seq1  CTCCTCCTTAGCTCCCCCATCCTATCTCCCATCCCTTTTGTCTCTAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTTAGCTCCCCCATCCTATCTCCCATCCCTTTTGTCTCTAAGAA  550

seq1  AGTTATCCCCCATCCACCCATGCATTCCTGCCTTACACCTCTAGCATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCCCCCATCCACCCATGCATTCCTGCCTTACACCTCTAGCATCCA  600

seq1  CCTACACTGGGGCATCAAGCCTCCACAGGACCAAGGGTCTCCCCTACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACACTGGGGCATCAAGCCTCCACAGGACCAAGGGTCTCCCCTACCAT  650

seq1  TGATGCCTGATAAGGCCATACTGTGCTAAAAATATAGTTGGAGCCATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCTGATAAGGCCATACTGTGCTAAAAATATAGTTGGAGCCATGGA  700

seq1  CCCCTCCATGTGTACTCTTTCACTGGTGGTTTAGTCCCTGGGAACTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCATGTGTACTCTTTCACTGGTGGTTTAGTCCCTGGGAACTCTGG  750

seq1  AGGGCCGTGGGTCAAGTAAATTGATATTGTTTTTCTTCCTGTAGGGTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCGTGGGTCAAGTAAATTGATATTGTTTTTCTTCCTGTAGGGTTTC  800

seq1  AGTCTCCTTTAGTTTCTTTGCTCCTTCCCCTAATTCCTCCATTAAGATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCCTTTAGTTTCTTTGCTCCTTCCCCTAATTCCTCCATTAAGATGA  850

seq1  GTTACATGGTTGGCTGTGAATATCTGCATCTGCTTTTGTCAGACGCTGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATGGTTGGCTGTGAATATCTGCATCTGCTTTTGTCAGACGCTGGT  900

seq1  ATAGTCTCTCAGAGA  915
      |||||||||||||||
seq2  ATAGTCTCTCAGAGA  915