BAC Information

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BAC

Clone NameB6Ng01-128F15
Chromosome14 (Build37)
Map Location 16,225,908 - 16,362,835
singlet/doubletdoublet
Overlap geneLrrc3b
Upstream geneOlfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
Downstream geneLOC667205, 1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1, Top2b, Rarb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128F15.bB6Ng01-128F15.g
ACCDH930225DH930226
length1,160646
definitionDH930225|Mus musculus domesticus DNA, BAC clone: B6Ng01-128F15, 5' end.DH930226|Mus musculus domesticus DNA, BAC clone: B6Ng01-128F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,225,908 - 16,227,079)(16,362,190 - 16,362,835)
sequence
gaattcattcaatgttcatcagttgaaaaagaaaacaaccagtggtataa
gctacacaacattcaggactttgtttttaaatatatttacacaaatacta
atatcaacacaaacagttttgcgtgtctacctagtgttgcctatagtggg
acacactggcacaactgctaaggagataaattctagtgtgcatgtggacc
tcttttggagaccataacactttagtgtagttcaactgctggaaggaaaa
aaacaaaacaaaacaaaacaaaacaaaacaaaaacaaaccttccatttac
agtagacaacctaacaacaaatagtttcagaaggaacttcagtatgtcat
cctgaatatatttgtagttcttgtgtgctggaaaaaaaataaaagagtca
cacatcaagacagcaattgtttaccactggttgtaacattttgggttgat
tatttgttttttgtgttactcaaattttctatgataataatttatctatt
tcaaaaagaaaaaaaaatcacaaaagacttaatggacaatcccaacaccc
ctggatcaggaaatcctagttttctgtaaacctaaacttctaggctcttg
tcaaatgttttgatgtcttcctgaagacctttgcctgtggactggaggag
actaggcatttgtataaatgacaccacataaaagataagtttcagatgtt
ggtacagaacacagccttcaccatcaagggaataagagattatttgctca
agagcgaaatatgagtgactattgcctggaaaaacatttatattagtgca
aatgccattttccaatgaggtaagcattcaatgaagttttagaactaaca
gaacgtagaaaggcatacattaggacatttttcaaatacattgttgggaa
catcaggtatgtaagtttgagcaaaacagagaaacctttgctataggcct
cagatactgattttatcctaaagtattgatgagtaggagttagtgatctg
atgatgcacccccacagttcacagaatcgtcatagggaagttatgcagac
atagaggtgagcagaaaaagcttagagtcctaatgagtctaggagattat
tagttccggcctggatatctaatccacctcatcacctcaagtctaggcaa
cttgacgaag
gaattcactaaatttgtttatcttacaaggagcagagcagagccaaggca
aattaagtgtcaagagatcaagaccatgaaggcgactgacatgtccatca
caaaaagaagcagaaaagaattacattgaagtaactctagagtttacagt
ctattgatcaagttatctcaaacatacatttcactcaattcatggtaaat
agctactaggtgctagatgtgttttcacacactgggaataaactaaataa
gacagtaactagcttaaaaatgttgttttcttcttttttagcatttattg
agaggcatgcatggccatttatgaagggcctacaatatgcaagtcctgtc
aaactcataaagttcttagtctccaagcaacattaaaaacagtgccccac
aaatagatcgaacttgaaaatatcatcctgtgtgaggtaacccagcctga
aaaagacatacattacatgtacttacttataggtgaatattagtcataaa
acacagggtatccacacaacactctaaagaagctaaacaagaggaaacgc
ccaagggagaaaggtttaatctcacataaaaggggaataaaataggaggc
cactggagggagggaacagggtgggagaaggaatgggagggaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16225908_16227079
seq2: B6Ng01-128F15.b_48_1207

seq1  GAATTCATTCAATGTTCATCAGTTGAAAAAGAAAACAACCAGTGGTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCAATGTTCATCAGTTGAAAAAGAAAACAACCAGTGGTATAA  50

seq1  GCTACACAACATTCAGGACTTTGTTTTTAAATATATTTACACAAATACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACACAACATTCAGGACTTTGTTTTTAAATATATTTACACAAATACTA  100

seq1  ATATCAACACAAACAGTTTTGCGTGTCTACCTAGTGTTGCCTATAGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAACACAAACAGTTTTGCGTGTCTACCTAGTGTTGCCTATAGTGGG  150

seq1  ACACACTGGCACAACTGCTAAGGAGATAAATTCTAGTGTGCATGTGGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTGGCACAACTGCTAAGGAGATAAATTCTAGTGTGCATGTGGACC  200

seq1  TCTTTTGGAGACCATAACACTTTAGTGTAGTTCAACTGCTGGAAGGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGGAGACCATAACACTTTAGTGTAGTTCAACTGCTGGAAGGAAAA  250

seq1  AAACAAAACAAAACAAAACAAAACAAAACAAAAACAAACCTTCCATTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACAAAACAAAACAAAACAAAAACAAACCTTCCATTTAC  300

seq1  AGTAGACAACCTAACAACAAATAGTTTCAGAAGGAACTTCAGTATGTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACAACCTAACAACAAATAGTTTCAGAAGGAACTTCAGTATGTCAT  350

seq1  CCTGAATATATTTGTAGTTCTTGTGTGCTGGAAAAAAAATAAAAGAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATATATTTGTAGTTCTTGTGTGCTGGAAAAAAAATAAAAGAGTCA  400

seq1  CACATCAAGACAGCAATTGTTTACCACTGGTTGTAACATTTTGGGTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCAAGACAGCAATTGTTTACCACTGGTTGTAACATTTTGGGTTGAT  450

seq1  TATTTGTTTTTTGTGTTACTCAAATTTTCTATGATAATAATTTATCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTTTTTGTGTTACTCAAATTTTCTATGATAATAATTTATCTATT  500

seq1  TCAAAAAGAAAAAAAAATCACAAAAGACTTAATGGACAATCCCAACACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGAAAAAAAAATCACAAAAGACTTAATGGACAATCCCAACACCC  550

seq1  CTGGATCAGGAAATCCTAGTTTTCTGTAAACCTAAACTTCTAGGCTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATCAGGAAATCCTAGTTTTCTGTAAACCTAAACTTCTAGGCTCTTG  600

seq1  TCAAATGTTTTGATGTCTTCCTGAAGACCTTTGCCTGTGGACTGGAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTTTTGATGTCTTCCTGAAGACCTTTGCCTGTGGACTGGAGGAG  650

seq1  ACTAGGCATTTGTATAAATGACACCACATAAAAGATAAGTTTCAGATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGCATTTGTATAAATGACACCACATAAAAGATAAGTTTCAGATGTT  700

seq1  GGTACAGAACACAGCCTTCACCATCAAGGGAATAAGAGATTATTTGCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGAACACAGCCTTCACCATCAAGGGAATAAGAGATTATTTGCTCA  750

seq1  AGAGCGAAATATGAGTGACTATTGCCTGGAAAAACATTTATATTAGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCGAAATATGAGTGACTATTGCCTGGAAAAACATTTATATTAGTGCA  800

seq1  AATGCCATTTTCCAATGAGGTAAGCATTCAATGAAGTTTTAGAACTAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCATTTTCCAATGAGGTAAGCATTCAATGAAGTTTTAGAACTAACA  850

seq1  GAACGTAGAAAGGCATACATTAGGACATTTTTCAAATACATTGTTGGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGTAGAAAGGCATACATTAGGACATTTTTCAAATACATTGTTGGGAA  900

seq1  CATCAGGTATGTAAGTTTGAGCAAAACAGAGAAACCTTTGCTATAGGCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGTATGTAAGTTTGAGCAAAACAGAGAAACCTTTGCTATAGGCCT  950

seq1  CAGATACTGATTTTATCCTAAAGTATTGATGAGGTAGGAGTTAGTGATCT  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGATACTGATTTTATCCTAAAGTATTGATGA-GTAGGAGTTAGTGATCT  999

seq1  GATGATGCA-CCCCACAGTTCCACAGAATCGTCATAAGGAAGTTATGCCA  1049
      ||||||||| |||||||||| ||||||||||||||| |||||||||| ||
seq2  GATGATGCACCCCCACAGTT-CACAGAATCGTCATAGGGAAGTTATG-CA  1047

seq1  GACATAGAGGTGAGCAAGAAAAAGCTTAGAGTCTAAATAGAGTCTAGGAA  1099
      ||||||||||||||| |||||||||||||||||  ||| |||||||||| 
seq2  GACATAGAGGTGAGC-AGAAAAAGCTTAGAGTCCTAAT-GAGTCTAGGA-  1094

seq1  GAATTATTAGGTTCCGGCCCTGCGATATTCTATCCACTTCAAATCA-CTC  1148
        ||||||| ||||||| |||| |||||   |||||| ||  |||| |||
seq2  -GATTATTA-GTTCCGG-CCTG-GATATCTAATCCACCTC--ATCACCTC  1138

seq1  AAGTTCTAGGCAACCTTGACGAAG  1172
      ||| ||||||||| ||||||||||
seq2  AAG-TCTAGGCAA-CTTGACGAAG  1160

seq1: chr14_16362190_16362835
seq2: B6Ng01-128F15.g_70_715 (reverse)

seq1  ACATTCCCTCCCATTCCTTCTCCCACCCTGTTCCCTCCCTCCAGTGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCCTCCCATTCCTTCTCCCACCCTGTTCCCTCCCTCCAGTGGCCT  50

seq1  CCTATTTTATTCCCCTTTTATGTGAGATTAAACCTTTCTCCCTTGGGCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTTTATTCCCCTTTTATGTGAGATTAAACCTTTCTCCCTTGGGCGT  100

seq1  TTCCTCTTGTTTAGCTTCTTTAGAGTGTTGTGTGGATACCCTGTGTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTTGTTTAGCTTCTTTAGAGTGTTGTGTGGATACCCTGTGTTTTA  150

seq1  TGACTAATATTCACCTATAAGTAAGTACATGTAATGTATGTCTTTTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAATATTCACCTATAAGTAAGTACATGTAATGTATGTCTTTTTCAG  200

seq1  GCTGGGTTACCTCACACAGGATGATATTTTCAAGTTCGATCTATTTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTTACCTCACACAGGATGATATTTTCAAGTTCGATCTATTTGTGG  250

seq1  GGCACTGTTTTTAATGTTGCTTGGAGACTAAGAACTTTATGAGTTTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGTTTTTAATGTTGCTTGGAGACTAAGAACTTTATGAGTTTGACA  300

seq1  GGACTTGCATATTGTAGGCCCTTCATAAATGGCCATGCATGCCTCTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGCATATTGTAGGCCCTTCATAAATGGCCATGCATGCCTCTCAAT  350

seq1  AAATGCTAAAAAAGAAGAAAACAACATTTTTAAGCTAGTTACTGTCTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTAAAAAAGAAGAAAACAACATTTTTAAGCTAGTTACTGTCTTAT  400

seq1  TTAGTTTATTCCCAGTGTGTGAAAACACATCTAGCACCTAGTAGCTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTATTCCCAGTGTGTGAAAACACATCTAGCACCTAGTAGCTATTT  450

seq1  ACCATGAATTGAGTGAAATGTATGTTTGAGATAACTTGATCAATAGACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAATTGAGTGAAATGTATGTTTGAGATAACTTGATCAATAGACTG  500

seq1  TAAACTCTAGAGTTACTTCAATGTAATTCTTTTCTGCTTCTTTTTGTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCTAGAGTTACTTCAATGTAATTCTTTTCTGCTTCTTTTTGTGAT  550

seq1  GGACATGTCAGTCGCCTTCATGGTCTTGATCTCTTGACACTTAATTTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGTCAGTCGCCTTCATGGTCTTGATCTCTTGACACTTAATTTGCC  600

seq1  TTGGCTCTGCTCTGCTCCTTGTAAGATAAACAAATTTAGTGAATTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCTGCTCTGCTCCTTGTAAGATAAACAAATTTAGTGAATTC  646