BAC Information

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BAC

Clone NameB6Ng01-128H20
Chromosome14 (Build37)
Map Location 70,592,962 - 70,738,646
singlet/doubletdoublet
Overlap geneSorbs3, Ppp3cc, LOC100043115, Slc39a14
Upstream geneStc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2
Downstream geneEG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2, LOC100043132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128H20.bB6Ng01-128H20.g
ACCDH930327DH930328
length6881,036
definitionDH930327|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H20, 5' end.DH930328|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,737,959 - 70,738,646)(70,592,962 - 70,593,999)
sequence
gaattcaaatcccagcaaccacatggtggctcacaaccacctgtaacgag
atctggcaccctcttctggtgtgtctgaagacagctacagtgtacttaca
tgtaataaataaataaaaaaaaaaaaagaaaagaaatacagaaaaaagaa
agactattatgtcaccagttgagtaaaattaaaaaggaagtaattaggaa
aacatttgaccatgtgaccaaaggttaatatacaatgaagtcttttctcc
ccctggaataggcattctttaaacatcaaggtgatgtgtgtatgcacatg
cgcatgtgtacatccatgggagtgtgtgtgggtggtatgtgcattccagt
gcctgtagaggctagcagagggtgttagatcccctgggatggagttgcca
atggttgtgagccactcagtacaggtgctggcaaccaaacacaagtcctg
gaaaagaggcaaaaaaaaaaaaaaaaaaaaaaaaaaaagctcagcctcag
caatggactcctaaataaaccactgagaaaaagatgtgtgtttcagtaca
aatgcggagaggcacatagccggcaactgggaaaataaaaatacaactgc
ttataaacttgaaaaatgtttaatcatactgataaccaaataatcaaata
aaatgcaaggccaatgagtgagtgggtgggtggtggtg
gaattcagctctcaattcatgagtacctttgataatgcttatattattct
gtgtgtatttaattaatcatctactacattcaggcactgtccttggtgct
agggatagagctgaaaatgtatctgcctaaggcaagtcggagccttggct
ctatggcctctatccatggctactaggaccacattgcccagagtcaccct
tgtttactgttgaccccggtgcccttcccccatgccatctgggacactca
cctcaatgggctgtgcaggcttctcaacagggtcatccaccagtggtttc
ttaggctgtagggtgggaagggtatgtcaaaggggatgaacccatttgga
acaggctccaaatgaggggtgtgtccagtcctagaggaacctgctaatgt
gctcaccttatgcccagtttctagttcgtgcagaaactggttccaggaat
cttctgtccagacattctctactttctctcgatgtctaggcacctgtacg
gatatgggtggccatcagcttgcgtagagggacactagggttgtctctag
agtctaaaggcaggcaggccttgtcttccctgatatgcctatgaatccct
tataaagtatgcaagctgaaatcggaatggtctgtgctatgtcagcagat
aggtgaggccagagaatgtgcagctggggatggggttggggaacaaaatg
gcctacctgatttgggggatgaaagccctgaagaggatggtctaaaaatt
atagttaaaggtgtttctagatgtctcttcagagtggttcccgtttcttc
tgaagaaagagaaaacaccacgtcagcttcctcttagaaaactgagacct
gcgtgagaatgtaaccaaaggagaagggatcgtgcctttctctatctctg
tcattcacactgaggaaacctaccttcccctattatgggaattgtgcagt
agacctgtagctatagcaagctgttgggaaccttgggttgatctggtaaa
tgggagtgatttatcaggaacattgcactagtgtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_70737959_70738646
seq2: B6Ng01-128H20.b_46_733 (reverse)

seq1  CACCACCACCCACCCACTCACTCATTGGCCTTGCATTTTATTTGATTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCCACCCACTCACTCATTGGCCTTGCATTTTATTTGATTATT  50

seq1  TGGTTATCAGTATGATTAAACATTTTTCAAGTTTATAAGCAGTTGTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATCAGTATGATTAAACATTTTTCAAGTTTATAAGCAGTTGTATTT  100

seq1  TTATTTTCCCAGTTGCCGGCTATGTGCCTCTCCGCATTTGTACTGAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCCCAGTTGCCGGCTATGTGCCTCTCCGCATTTGTACTGAAACA  150

seq1  CACATCTTTTTCTCAGTGGTTTATTTAGGAGTCCATTGCTGAGGCTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTTTTTCTCAGTGGTTTATTTAGGAGTCCATTGCTGAGGCTGAGC  200

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTCTTTTCCAGGACTTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTCTTTTCCAGGACTTGTGT  250

seq1  TTGGTTGCCAGCACCTGTACTGAGTGGCTCACAACCATTGGCAACTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGCCAGCACCTGTACTGAGTGGCTCACAACCATTGGCAACTCCAT  300

seq1  CCCAGGGGATCTAACACCCTCTGCTAGCCTCTACAGGCACTGGAATGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGGATCTAACACCCTCTGCTAGCCTCTACAGGCACTGGAATGCAC  350

seq1  ATACCACCCACACACACTCCCATGGATGTACACATGCGCATGTGCATACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACCCACACACACTCCCATGGATGTACACATGCGCATGTGCATACA  400

seq1  CACATCACCTTGATGTTTAAAGAATGCCTATTCCAGGGGGAGAAAAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCACCTTGATGTTTAAAGAATGCCTATTCCAGGGGGAGAAAAGACT  450

seq1  TCATTGTATATTAACCTTTGGTCACATGGTCAAATGTTTTCCTAATTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTATATTAACCTTTGGTCACATGGTCAAATGTTTTCCTAATTACT  500

seq1  TCCTTTTTAATTTTACTCAACTGGTGACATAATAGTCTTTCTTTTTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTAATTTTACTCAACTGGTGACATAATAGTCTTTCTTTTTTCTG  550

seq1  TATTTCTTTTCTTTTTTTTTTTTTATTTATTTATTACATGTAAGTACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTTTCTTTTTTTTTTTTTATTTATTTATTACATGTAAGTACACT  600

seq1  GTAGCTGTCTTCAGACACACCAGAAGAGGGTGCCAGATCTCGTTACAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGTCTTCAGACACACCAGAAGAGGGTGCCAGATCTCGTTACAGGT  650

seq1  GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAATTC  688
      ||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAATTC  688

seq1: chr14_70592962_70593999
seq2: B6Ng01-128H20.g_68_1103

seq1  GAATTCAGCTCTCAATTCATGAGTACCTTTGATAATGCTTATATTATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCTCAATTCATGAGTACCTTTGATAATGCTTATATTATTCT  50

seq1  GTGTGTATTTAATTAATCATCTACTACATTCAGGCACTGTCCTTGGTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATTTAATTAATCATCTACTACATTCAGGCACTGTCCTTGGTGCT  100

seq1  AGGGATAGAGCTGAAAATGTATCTGCCTAAGGCAAGTCGGAGCCTTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATAGAGCTGAAAATGTATCTGCCTAAGGCAAGTCGGAGCCTTGGCT  150

seq1  CTATGGCCTCTATCCATGGCTACTAGGACCACATTGCCCAGAGTCACCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGCCTCTATCCATGGCTACTAGGACCACATTGCCCAGAGTCACCCT  200

seq1  TGTTTACTGTTGACCCCGGTGCCCTTCCCCCATGCCATCTGGGACACTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACTGTTGACCCCGGTGCCCTTCCCCCATGCCATCTGGGACACTCA  250

seq1  CCTCAATGGGCTGTGCAGGCTTCTCAACAGGGTCATCCACCAGTGGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATGGGCTGTGCAGGCTTCTCAACAGGGTCATCCACCAGTGGTTTC  300

seq1  TTAGGCTGTAGGGTGGGAAGGGTATGTCAAAGGGGATGAACCCATTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTGTAGGGTGGGAAGGGTATGTCAAAGGGGATGAACCCATTTGGA  350

seq1  ACAGGCTCCAAATGAGGGGTGTGTCCAGTCCTAGAGGAACCTGCTAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTCCAAATGAGGGGTGTGTCCAGTCCTAGAGGAACCTGCTAATGT  400

seq1  GCTCACCTTATGCCCAGTTTCTAGTTCGTGCAGAAACTGGTTCCAGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACCTTATGCCCAGTTTCTAGTTCGTGCAGAAACTGGTTCCAGGAAT  450

seq1  CTTCTGTCCAGACATTCTCTACTTTCTCTCGATGTCTAGGCACCTGTACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTCCAGACATTCTCTACTTTCTCTCGATGTCTAGGCACCTGTACG  500

seq1  GATATGGGTGGCCATCAGCTTGCGTAGAGGGACACTAGGGTTGTCTCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGGTGGCCATCAGCTTGCGTAGAGGGACACTAGGGTTGTCTCTAG  550

seq1  AGTCTAAAGGCAGGCAGGCCTTGTCTTCCCTGATATGCCTATGAATCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAAGGCAGGCAGGCCTTGTCTTCCCTGATATGCCTATGAATCCCT  600

seq1  TATAAAGTATGCAAGCTGAAATCGGAATGGTCTGTGCTATGTCAGCAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTATGCAAGCTGAAATCGGAATGGTCTGTGCTATGTCAGCAGAT  650

seq1  AGGTGAGGCCAGAGAATGTGCAGCTGGGGATGGGGTTGGGGAACAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGGCCAGAGAATGTGCAGCTGGGGATGGGGTTGGGGAACAAAATG  700

seq1  GCCTACCTGATTTGGGGGATG-AAGCCCTGAAGAGGATGGTCT-AAAATT  748
      ||||||||||||||||||||| ||||||||||||||||||||| ||||||
seq2  GCCTACCTGATTTGGGGGATGAAAGCCCTGAAGAGGATGGTCTAAAAATT  750

seq1  ATAGTTAAAGGTGTTTCTAGATGTCTCTTCAGAGTGGTTCCAGTTTCTTC  798
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATAGTTAAAGGTGTTTCTAGATGTCTCTTCAGAGTGGTTCCCGTTTCTTC  800

seq1  TGAAGAAAGAGAAAACACCACGTCAGCTTCCTCTTAGAAAACTGAGACCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAGAGAAAACACCACGTCAGCTTCCTCTTAGAAAACTGAGACCT  850

seq1  GCGTGAGAATGTAACCAAAGGAGAAGGGATCGTGCCTTTCTCTATCTCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGAGAATGTAACCAAAGGAGAAGGGATCGTGCCTTTCTCTATCTCTG  900

seq1  TCATTCACACTGAGGAAACCTACCTCCCCCTATTATGGAAGTTGTGCAGT  948
      ||||||||||||||||||||||||| |||||||||||| | |||||||||
seq2  TCATTCACACTGAGGAAACCTACCTTCCCCTATTATGGGAATTGTGCAGT  950

seq1  AGACCTGTAGCTATAGCAAGCTGTATGGAACCTTGGGCTCGATACTGGTA  998
      ||||||||||||||||||||||||  ||||||||||| | ||| ||||| 
seq2  AGACCTGTAGCTATAGCAAGCTGTTGGGAACCTTGGG-TTGAT-CTGGT-  997

seq1  AAATGGGAGTGACTTATCAGGGAGCATGCACTAGGTGTCC  1038
      |||||||||||| |||||||| |   ||||||| ||||||
seq2  AAATGGGAGTGATTTATCAGGAACATTGCACTA-GTGTCC  1036