BAC Information

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BAC

Clone NameB6Ng01-128I01
Chromosome14 (Build37)
Map Location 11,399,602 - 11,400,718
singlet/doubletsinglet
Overlap geneFhit
Upstream geneLOC100042415
Downstream geneLOC100041974, LOC667030, EG382843, LOC100042427, LOC667059, LOC100041996, Ptprg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128I01.bB6Ng01-128I01.g
ACCDH930337DH930338
length1,2371,094
definitionDH930337|Mus musculus domesticus DNA, BAC clone: B6Ng01-128I01, 5' end.DH930338|Mus musculus domesticus DNA, BAC clone: B6Ng01-128I01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatagcaaaagcaatatacagtagacca
gtagtcaacaacaaactaaatggagagaaacttgaagcaatcccactgaa
atcagggactaaacaaggttgtccagtctctccctaagatcaagaattga
caaatgggacgtcaaaaaaattgcacctgttcaatatagtactggaagtc
cttagatagcaaaaggagatcaaagggatataaattgaaaatgaagaaat
caagatatcagtatttgcaaatgatatgatagtatacttaagtgacccac
aaaatgccaccagagaactcctatagctgatcaacaacttcagaaaaata
gctgcatataaaattaactcaaacaaatcagtggccttcttctactcaat
ggataaacaggctacaaaacacattagggaaatgacacccttcataatag
tcacaaatagtataaaataccttgttgtgactctaactaagcaaatgaaa
gatctatatatatatatatgacaagagattccagtctctgaagaaagaaa
tcgaagatctcaaaagatgagaagatctctcatgttcatgaattggcagg
attaatatagtaaatatagccctcttgctgaaagcagtctacagattcaa
ttcaatccccataaaaattccaagtcaattcttcataaagttagaaagag
caatttgcaattcaattggaataactaaaaacccaggatatcaaatgaaa
actattctcaacaataaaagaacttctgggggaatcacgacccctgacct
cgagctgtattacagagcaatcatgataaaaactgcctggtattggtaca
atgacaggccggtagataaatataatataatataattgaagacccagaaa
tgaacccacaccccagaaatgaacccacacccctatgatcacatgatctt
ttgtggggcaatgggctatgcacagacagcctggtctccagtagagctta
cgtcttgaatcccagcgtacctgttgggtggtaatttctactacatggac
aaaaaggcttttgaccaagtctctgacccctcgaagtacctcccccacag
ccccacagaataggcgtgtttctatcagtatgtagaacatgtcccaaccc
tgggtatctgggctaagacttcccaagtaactaacacggcaagaaggcag
ctcactaaagagggcgcgttttgacacacacactgtc
gaattccttctgaataagaaaacaggaaaaaaaatcttttacctttcatc
ctctgagatatgaccaaataacaggtgtctggggtccaagtccctgtttc
ctgttatgtctccattctgatttacctgggatgtagctggtatctcaact
acattcaatattctatgtttgtttgttttgctttaggcttttcctgttcc
taagcattccaccccaccagctctagactttgcccctggctcgctagacc
agggtgatagaatagcaagcacaattgctctcgagcccagagattgatct
ttgctgagttgaagctggtatgatgagttgttaaccctgttagaaaaata
caagttagatttatgattctctcacacaggtaatttagctctaattttga
attctgagccaactgatttatacaatattgcattatagcatcacaaaagt
gcaattgagtccaggtgatgtatgactttgagcttccaattatgcaataa
atgatttcagttctttaataagtgatatctgggttaacatctgctggccc
actccacactcatgctctcatctctaccctggacctttctctcctctttt
tcttttccctcttcttttccaggcttgaatgacttagggactatttactt
tcgaaatcccagccctttgtattgcaacatccttccttcgagctctcatt
gacatttcctctcagtaatggccaacttctgtaggccattattatttggc
tgtggatagcatgtgctctgtggatatgtcatatagagaaggcatattcc
tggcatgtgatagttcatctaagagcttcctttggattattgaagtccta
ctatgctcacctttagtatgccaagtttttccttcttatttttttctttg
gaatgattttcctttttacttccctcagtcaatttatttttagctgcttg
tattccctgtatgtctgtaaggtttataaaattattttgggagtgagggt
gcagagattactaataccagagcagtgtgggacttaggacgatcttaaag
gagaacaaatattggaatctatatttggatcttccttgttggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_11399602_11400718
seq2: B6Ng01-128I01.g_66_1159 (reverse)

seq1  TTCCAACAAAAGAAAAGAATTCAAAATATAGATTCCAATTATTTGTCTCT  50
      |||||||||     ||||  || ||||||||||||||| ||||||| |||
seq2  TTCCAACAA---GGAAGA--TCCAAATATAGATTCCAA-TATTTGT-TCT  43

seq1  CTTTCAGGATCTGTCCCTAAGGTTCCCACAACTGCCTCTGGTCCTTTTTG  100
      | || | |||| || ||||||  |||||| |||| |||||||        
seq2  CCTTTAAGATC-GT-CCTAAG--TCCCAC-ACTG-CTCTGGT--------  79

seq1  TTTATTTCTTTCTTTCCAACCCTCACTCCCAAAATAATTTTATATACCTT  150
       ||| |  | |||     |||||||||||||||||||||||||| |||||
seq2  ATTAGTAATCTCT---GCACCCTCACTCCCAAAATAATTTTATAAACCTT  126

seq1  ACAGACATACAGGGAATACAAGCAGCTAAAAATAAATTGACTGAGGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATACAGGGAATACAAGCAGCTAAAAATAAATTGACTGAGGGAAG  176

seq1  TAAAAAGGAAAATCATTCCAAAG-AAAAAATAAGAAGGAAAAACTTGGCA  249
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAAAAAGGAAAATCATTCCAAAGAAAAAAATAAGAAGGAAAAACTTGGCA  226

seq1  TACTAAAGGTGAGCATAGTAGGACTTCAATAATCCAAAGGAAGCTCTTAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAGGTGAGCATAGTAGGACTTCAATAATCCAAAGGAAGCTCTTAG  276

seq1  ATGAACTATCACATGCCAGGAATATGCCTTCTCTATATGACATATCCACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTATCACATGCCAGGAATATGCCTTCTCTATATGACATATCCACA  326

seq1  GAGCACATGCTATCCACAGCCAAATAATAATGGCCTACAGAAGTTGGCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACATGCTATCCACAGCCAAATAATAATGGCCTACAGAAGTTGGCCA  376

seq1  TTACTGAGAGGAAATGTCAATGAGAGCTCGAAGGAAGGATGTTGCAATAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAGAGGAAATGTCAATGAGAGCTCGAAGGAAGGATGTTGCAATAC  426

seq1  AAAGGGCTGGGATTTCGAAAGTAAATAGTCCCTAAGTCATTCAAGCCTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCTGGGATTTCGAAAGTAAATAGTCCCTAAGTCATTCAAGCCTGG  476

seq1  AAAAGAAGAGGGAAAAGAAAAAGAGGAGAGAAAGGTCCAGGGTAGAGATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGAGGGAAAAGAAAAAGAGGAGAGAAAGGTCCAGGGTAGAGATG  526

seq1  AGAGCATGAGTGTGGAGTGGGCCAGCAGATGTTAACCCAGATATCACTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATGAGTGTGGAGTGGGCCAGCAGATGTTAACCCAGATATCACTTA  576

seq1  TTAAAGAACTGAAATCATTTATTGCATAATTGGAAGCTCAAAGTCATACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAACTGAAATCATTTATTGCATAATTGGAAGCTCAAAGTCATACA  626

seq1  TCACCTGGACTCAATTGCACTTTTGTGATGCTATAATGCAATATTGTATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGGACTCAATTGCACTTTTGTGATGCTATAATGCAATATTGTATA  676

seq1  AATCAGTTGGCTCAGAATTCAAAATTAGAGCTAAATTACCTGTGTGAGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTTGGCTCAGAATTCAAAATTAGAGCTAAATTACCTGTGTGAGAG  726

seq1  AATCATAAATCTAACTTGTATTTTTCTAACAGGGTTAACAACTCATCATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATAAATCTAACTTGTATTTTTCTAACAGGGTTAACAACTCATCATA  776

seq1  CCAGCTTCAACTCAGCAAAGATCAATCTCTGGGCTCGAGAGCAATTGTGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTCAACTCAGCAAAGATCAATCTCTGGGCTCGAGAGCAATTGTGC  826

seq1  TTGCTATTCTATCACCCTGGTCTAGCGAGCCAGGGGCAAAGTCTAGAGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTCTATCACCCTGGTCTAGCGAGCCAGGGGCAAAGTCTAGAGCT  876

seq1  GGTGGGGTGGAATGCTTAGGAACAGGAAAAGCCTAAAGCAAAACAAACAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGTGGAATGCTTAGGAACAGGAAAAGCCTAAAGCAAAACAAACAA  926

seq1  ACATAGAATATTGAATGTAGTTGAGATACCAGCTACATCCCAGGTAAATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAATATTGAATGTAGTTGAGATACCAGCTACATCCCAGGTAAATC  976

seq1  AGAATGGAGACATAACAGGAAACAGGGACTTGGACCCCAGACACCTGTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGAGACATAACAGGAAACAGGGACTTGGACCCCAGACACCTGTTA  1026

seq1  TTTGGTCATATCTCAGAGGATGAAAGGTAAAAGATTTTTTTTCCTGTTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCATATCTCAGAGGATGAAAGGTAAAAGATTTTTTTTCCTGTTTT  1076

seq1  CTTATTCAGAAGGAATTC  1117
      ||||||||||||||||||
seq2  CTTATTCAGAAGGAATTC  1094