BAC Information

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BAC

Clone NameB6Ng01-128O02
Chromosome14 (Build37)
Map Location 114,443,972 - 114,444,744
singlet/doubletsinglet
Overlap genenone
Upstream geneTpm3-rs7, LOC100043510, LOC382947
Downstream geneLOC668791, LOC100043821, LOC100043521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128O02.bB6Ng01-128O02.g
ACCDH930615DH930616
length1,199772
definitionDH930615|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O02, 5' end.DH930616|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggctatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtcg
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctatctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaacgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttcttttcttcagagatttgaagttttatcata
cagatctttcacttccttagttagagtcacgccagatatttttatattat
ttgtgactattgagacgtgttgttccctaatttctttctcagctgtttat
ctttgtttgagaagccatggactgtttgagttatttatattccagcttac
ttcaccgagcctgttatcagttaggagtctctgtgagaatttaggtcact
ataatcattcattcactcgcaatgaatgacctccctttcaattgtatcgt
gatccttgtgcatgcctcggcaactccagacctagtgtacagtaaggcg
gaattcattgaacagtgtgtaaatagtgctaaatggtccatgggatttca
tttacttttagaaaatgtgtttgttcaggaaacagagggataagcatatc
agtagctttcttctgcctgcatctaaggctgcagctctgggttgcttata
aaagttagatttcttgtaaaagttacttaactaacccgaggaacgattgc
atcttacttttatttacaataaatttgattagtaatgcccagaaaagttc
tcttgtgcaagctcactaattgaatctatgtcagtcatactagaggcagt
ctcctgactactaactcagcatgtctttcacacaaaatgcttcttcgcct
gcggttctcctgtgtattgcttttcttttcataagtgattcaaataatcc
ctaatgattgactgtgtgtattctttgggatttccagattgcctttctac
ctttgaagcttattacttcagagaagcaatatacttgattgattttttgt
tcctccttaaatttactgaatgattcatggcatcgatcatactatttttg
ttttcaagcaagtggtaaaatgataagatccaaatttataactttgactt
catctttctaatatatgtacatatgtatatgtttctaatctctaatatag
tatataataaaaaatctaatatgaatctatatatctagtacgtatgagtg
tttatgtgactgtgagtgtgggtgtgttctttattgctctctatcttatt
tttgaaatgtatctctcataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114443972_114444744
seq2: B6Ng01-128O02.g_71_842 (reverse)

seq1  TTTATGAGAGATTACATTTCAAAAATAAGATAGAGAGCAATAAAGAACAC  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGAGA-TACATTTCAAAAATAAGATAGAGAGCAATAAAGAACAC  49

seq1  ACCCACACTCACAGTCACATAAACACTCCTACGTACTAGATATATAGATT  100
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACCCACACTCACAGTCACATAAACACTCATACGTACTAGATATATAGATT  99

seq1  CATATTAGATTTTTTATTATATAACTATATTAGAGATTAGAAACATATAC  150
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CATATTAGATTTTTTATTATAT-ACTATATTAGAGATTAGAAACATATAC  148

seq1  ATATGTACATATATTAGAAAGATGAAGTC-AAGTTATAAATTTGGATCTT  199
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATATGTACATATATTAGAAAGATGAAGTCAAAGTTATAAATTTGGATCTT  198

seq1  ATCATTTTACCACTTGCTTGAAAACAAAAATAGTATGATCGATGCCATGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTACCACTTGCTTGAAAACAAAAATAGTATGATCGATGCCATGA  248

seq1  ATCATTCAGTAAATTTAAGGAGGAACAAAAAATCAATCAAGTATATTGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCAGTAAATTTAAGGAGGAACAAAAAATCAATCAAGTATATTGCT  298

seq1  TCTCTGAAGTAATAAGCTTCAAAGGTAGAAAGGCAATCTGGAAATCCCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAAGTAATAAGCTTCAAAGGTAGAAAGGCAATCTGGAAATCCCAA  348

seq1  AGAATACACACAGTCAATCATTAGGGATTATTTGAATCACTTATGAAAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACACACAGTCAATCATTAGGGATTATTTGAATCACTTATGAAAAG  398

seq1  AAAAGCAATACACAGGAGAACCGCAGGCGAAGAAGCATTTTGTGTGAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAATACACAGGAGAACCGCAGGCGAAGAAGCATTTTGTGTGAAAG  448

seq1  ACATGCTGAGTTAGTAGTCAGGAGACTGCCTCTAGTATGACTGACATAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGAGTTAGTAGTCAGGAGACTGCCTCTAGTATGACTGACATAGA  498

seq1  TTCAATTAGTGAGCTTGCACAAGAGAACTTTTCTGGGCATTACTAATCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTAGTGAGCTTGCACAAGAGAACTTTTCTGGGCATTACTAATCAA  548

seq1  ATTTATTGTAAATAAAAGTAAGATGCAATCGTTCCTCGGGTTAGTTAAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTGTAAATAAAAGTAAGATGCAATCGTTCCTCGGGTTAGTTAAGT  598

seq1  AACTTTTACAAGAAATCTAACTTTTATAAGCAACCCAGAGCTGCAGCCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTACAAGAAATCTAACTTTTATAAGCAACCCAGAGCTGCAGCCTT  648

seq1  AGATGCAGGCAGAAGAAAGCTACTGATATGCTTATCCCTCTGTTTCCTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGGCAGAAGAAAGCTACTGATATGCTTATCCCTCTGTTTCCTGA  698

seq1  ACAAACACATTTTCTAAAAGTAAATGAAATCCCATGGACCATTTAGCACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACATTTTCTAAAAGTAAATGAAATCCCATGGACCATTTAGCACT  748

seq1  ATTTACACACTGTTCAATGAATTC  773
      ||||||||||||||||||||||||
seq2  ATTTACACACTGTTCAATGAATTC  772