BAC Information

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BAC

Clone NameB6Ng01-129B10
Chromosome14 (Build37)
Map Location 120,724,337 - 120,820,642
singlet/doubletdoublet
Overlap geneMbnl2
Upstream geneHs6st3, EG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831
Downstream geneRap2a, LOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129B10.bB6Ng01-129B10.g
ACCDH930768DH930769
length671932
definitionDH930768|Mus musculus domesticus DNA, BAC clone: B6Ng01-129B10, 5' end.DH930769|Mus musculus domesticus DNA, BAC clone: B6Ng01-129B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,819,973 - 120,820,642)(120,724,337 - 120,725,267)
sequence
gaattctcttcacacattcatgatgggggtgcagggctagcctatccact
ggggtaagaatcaagacagggctttcttcgtgcacctgacagcaaggctt
ctctttcccaggctagtcccggcttctgtcttccacctgtgggagaatcc
caaggctcatttttttttcattttactctgagataggagggctagcctca
gctcatcttccactaacatattgtactctgttgtaattgaaagtatatga
gattctaatatatgtcccctaagaatgactggctcttacatacactaagg
ggcaaggtaaaaggataaggcagctcccccccaacttcttttcttttctt
gatctttttccctggtgttattgaaaatattgaagagtgcttatttatga
agaatagctatgagattatgtttgatatgcagctgtgaaagaaggaaaaa
cttaacaccttagacctgaggggtcaaatgagaaccaggaagaaaggaag
caggcagggtaagccatagctgcccaggaactagttgtctacgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgttgtgaatacatacatgtatgcactta
tgtgtgtgtatggatgagttgtgcatgcatgtgtgtgatgtgaatgcttg
tgtgtgtgtgcatgtgtatgg
gaattcactgcttaccttcaaacttacatgttggagttttcacggcggtt
gttttgagatcattgagactcggattgatttcgacatttaaccgaaagga
acagagcccaaagtagttctcatcatggccttgaacgttgcccccgtgag
agacacaaagtggctgacgctggaggtctgcagacagtaccagagaggaa
cgtgctcacgctccgacgaagaatgcaagtttgctcacccccccaaaagt
tgccaggttgaaaatggaagagtaattgcctgctttgattccctcaaggt
aagatgatcattttacatgtcgcctccagcttgcgtagggctctcaagga
gagcactgcattgagctctgcagggtttgccgttcagatcggttctgtct
tccttgtggtggctactgggaggtttatgttgtcttttggtttggttttc
actgaaacttatttatactaggcatacaaaaatttttttttccatatctg
tgtttaaattaaaaatacatggtggtgtatttctggtctggtttgacatt
caggtgcccaagagtttcaaatcaaagtcaggcctttgacaacggcagta
aacgttttattaacacatgatcttctccgggttacatgaaggtgaggaag
ccgaccctgtcactctcatgtgccagtcactctgactcacatctcagttc
ctcttcttgtggcttctgttcttgactagagccttcctaaatgcttcctg
ggggtgggggttcattcttttcttgaaaatgttttatggctggcagaaat
tactgagtgtaccttcaaagttaggtcttggaggacctcttttctgtaag
gacatcaggaaggatccagtgtgactcagaatgtccaccttgatgagctt
catgtctgaaggaaagttagggcacacgtgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_120819973_120820642
seq2: B6Ng01-129B10.b_49_719 (reverse)

seq1  CCATACACATGCACACACACACATGCATTCACATCACACACATGCATGCA  50
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCATACACATGCACACACACACAAGCATTCACATCACACACATGCATGCA  50

seq1  C-ACTCATCCATACACACACATAAGTGCATACATGTATGTATTCACAACA  99
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCATCCATACACACACATAAGTGCATACATGTATGTATTCACAACA  100

seq1  CACACACACACACACACACACACACACACGTAGACAACTAGTTCCTGGGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACGTAGACAACTAGTTCCTGGGC  150

seq1  AGCTATGGCTTACCCTGCCTGCTTCCTTTCTTCCTGGTTCTCATTTGACC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGGCTTACCCTGCCTGCTTCCTTTCTTCCTGGTTCTCATTTGACC  200

seq1  CCTCAGGTCTAAGGTGTTAAGTTTTTCCTTCTTTCACAGCTGCATATCAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGTCTAAGGTGTTAAGTTTTTCCTTCTTTCACAGCTGCATATCAA  250

seq1  ACATAATCTCATAGCTATTCTTCATAAATAAGCACTCTTCAATATTTTCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATCTCATAGCTATTCTTCATAAATAAGCACTCTTCAATATTTTCA  300

seq1  ATAACACCAGGGAAAAAGATCAAGAAAAGAAAAGAAGTTGGGGGGGAGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACCAGGGAAAAAGATCAAGAAAAGAAAAGAAGTTGGGGGGGAGCT  350

seq1  GCCTTATCCTTTTACCTTGCCCCTTAGTGTATGTAAGAGCCAGTCATTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTATCCTTTTACCTTGCCCCTTAGTGTATGTAAGAGCCAGTCATTCT  400

seq1  TAGGGGACATATATTAGAATCTCATATACTTTCAATTACAACAGAGTACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGACATATATTAGAATCTCATATACTTTCAATTACAACAGAGTACA  450

seq1  ATATGTTAGTGGAAGATGAGCTGAGGCTAGCCCTCCTATCTCAGAGTAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTAGTGGAAGATGAGCTGAGGCTAGCCCTCCTATCTCAGAGTAAA  500

seq1  ATGAAAAAAAAATGAGCCTTGGGATTCTCCCACAGGTGGAAGACAGAAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAAAAATGAGCCTTGGGATTCTCCCACAGGTGGAAGACAGAAGC  550

seq1  CGGGACTAGCCTGGGAAAGAGAAGCCTTGCTGTCAGGTGCACGAAGAAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGACTAGCCTGGGAAAGAGAAGCCTTGCTGTCAGGTGCACGAAGAAAG  600

seq1  CCCTGTCTTGATTCTTACCCCAGTGGATAGGCTAGCCCTGCACCCCCATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTTGATTCTTACCCCAGTGGATAGGCTAGCCCTGCACCCCCATC  650

seq1  ATGAATGTGTGAAGAGAATTC  670
      |||||||||||||||||||||
seq2  ATGAATGTGTGAAGAGAATTC  671

seq1: chr14_120724337_120725267
seq2: B6Ng01-129B10.g_69_1000

seq1  GAATTCACTGCTTACCTTCAAACTTACATGTTGGAGTTTTCACGGCGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCTTACCTTCAAACTTACATGTTGGAGTTTTCACGGCGGTT  50

seq1  GTTTTGAGATCATTGAGACTCGGATTGATTTCGACATTTAACCGAAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAGATCATTGAGACTCGGATTGATTTCGACATTTAACCGAAAGGA  100

seq1  ACAGAGCCCAAAGTAGTTCTCATCATGGCCTTGAACGTTGCCCCCGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCCAAAGTAGTTCTCATCATGGCCTTGAACGTTGCCCCCGTGAG  150

seq1  AGACACAAAGTGGCTGACGCTGGAGGTCTGCAGACAGTACCAGAGAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAAAGTGGCTGACGCTGGAGGTCTGCAGACAGTACCAGAGAGGAA  200

seq1  CGTGCTCACGCTCCGACGAAGAATGCAAGTTTGCTCACCCCCCCAAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCTCACGCTCCGACGAAGAATGCAAGTTTGCTCACCCCCCCAAAAGT  250

seq1  TGCCAGGTTGAAAATGGAAGAGTAATTGCCTGCTTTGATTCCCTCAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGTTGAAAATGGAAGAGTAATTGCCTGCTTTGATTCCCTCAAGGT  300

seq1  AAGATGATCATTTTACATGTCGCCTCCAGCTTGCGTAGGGCTCTCAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGATCATTTTACATGTCGCCTCCAGCTTGCGTAGGGCTCTCAAGGA  350

seq1  GAGCACTGCATTGAGCTCTGCAGGGTTTGCCGTTCAGATCGGTTCTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACTGCATTGAGCTCTGCAGGGTTTGCCGTTCAGATCGGTTCTGTCT  400

seq1  TCCTTGTGGTGGCTACTGGGAGGTTTATGTTGTCTTTTGGTTTGGTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTGGTGGCTACTGGGAGGTTTATGTTGTCTTTTGGTTTGGTTTTC  450

seq1  ACTGAAACTTATTTATACTAGGCATACAAAAATTTTTTTTTCCATATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATTTATACTAGGCATACAAAAATTTTTTTTTCCATATCTG  500

seq1  TGTTTAAATTAAAAATACATGGTGGTGTATTTCTGGTCTGGTTTGACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAATTAAAAATACATGGTGGTGTATTTCTGGTCTGGTTTGACATT  550

seq1  CAGGTGCCCAAGAGTTTCAAATCAAAGTCAGGCCTTTGACAACGGCAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGCCCAAGAGTTTCAAATCAAAGTCAGGCCTTTGACAACGGCAGTA  600

seq1  AACGTTTTATTAACACATGATCTTCTCCGGGTTACATGAAGGTGAGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTTTATTAACACATGATCTTCTCCGGGTTACATGAAGGTGAGGAAG  650

seq1  CCGACCCTGTCACTCTCATGTGCCAGTCACTCTGACTCACATCTCAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACCCTGTCACTCTCATGTGCCAGTCACTCTGACTCACATCTCAGTTC  700

seq1  CTCTTCTTGTGGCTTCTGTTCTTGACTAGAGCCTTCCTAAAATGCTTCCT  750
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTCTTCTTGTGGCTTCTGTTCTTGACTAGAGCCTTCCT-AAATGCTTCCT  749

seq1  GGGGGTGGGGGTTCATTC-TTTCTTGAAAATGTTTTATGGCTGGCAGAAA  799
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGGGGTGGGGGTTCATTCTTTTCTTGAAAATGTTTTATGGCTGGCAGAAA  799

seq1  TTACTGAGTGTACCCTCAAAGTTAGGTTCTTGAAGGACCTCCTCTCTGTA  849
      |||||||||||||| ||||||||||| ||||| |||||||| | ||||||
seq2  TTACTGAGTGTACCTTCAAAGTTAGG-TCTTGGAGGACCTCTTTTCTGTA  848

seq1  AGGAACATCACGGAGGAATCCAGTGTGACTCAG-ATGTCCA-CTTGATGA  897
      ||| |||||| ||| | |||||||||||||||| ||||||| ||||||||
seq2  AGG-ACATCA-GGAAGGATCCAGTGTGACTCAGAATGTCCACCTTGATGA  896

seq1  GC-TCATGTCTGGAGGGAAAGTAGGGCACA-GTGAC  931
      || ||||||||| ||| ||  ||||||||| |||||
seq2  GCTTCATGTCTGAAGGAAAGTTAGGGCACACGTGAC  932