BAC Information

Click to search

BAC

Clone NameB6Ng01-129B20
Chromosome14 (Build37)
Map Location 83,972,492 - 83,973,416
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043773
Downstream geneLOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285, Pcdh17, 9630013A20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129B20.bB6Ng01-129B20.g
ACCDH930787DH930788
length1,038270
definitionDH930787|Mus musculus domesticus DNA, BAC clone: B6Ng01-129B20, 5' end.DH930788|Mus musculus domesticus DNA, BAC clone: B6Ng01-129B20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatcatcatcatcatcatcatcatcaaaaacagtttcaataaa
atttggttttattcttctcatctcacaagtctttccagatactcccttcc
tctgtacctactcgaatttacttctcaaaaaaacaaaaacaaaaacaaaa
acaaaaacaaaaacaaaaacaaaaaatcccagcacaacaacaaaacaacc
gaagtcaagaaaacaggcagcactcaaaaactaacagcaaacagtaacca
aataaaatcacattccaaaatctgtagagtccattacatccaattacctc
tgatcatttagcctgccatgtagtgaatggtatacttactgttactccat
tggggaaaatgaattcccttctcttccatggtataagtgacagctcagtt
gttaaaatttaccctagaggataaatttgcattcattcattcattcattc
attcattcattcattcattcattcattttatacatgtgaaattaaatata
ataagacaaaataaaaactatcagattaaggttggaaaagacaaaccagt
aaaaggaaaactacccaaatggaagtaaaaagagacccactgattcacat
actcaaatgtcccatacaaagtactaaactggaaccataatgtatgtcca
gaaggactagtgcagacttttgtggggcctgtgtatgctgcttcagtctc
tgtgagttcaaatgtacatttaagttgatttaaagagccttcttttgctt
ggtgtcctctatacctctggctcttagactctttctgtggttgaggttct
ctgaactccaagggaaggaactttatgaagctatcccatttagggcaaag
tatcccaaggttccttactgtcttcttaacatctggttatgagtctctcc
atttgtttccatctgctgcagaaggaagcttccatgatgatgagggagta
atgctcaatctgtgagtacaacagactgtcatttgcaatcatttatcact
tctgtctttaaaaccgtgatacatgcttttatcctagg

agggaacccttttggaagacttaggggatggaatgaaggagatgaaggag
attgagactccataggaagaacaacagtatgaactaacacttcagagatt
ccagggactaaactaccaatcaaagaatatacatgggctggtccgtggct
ctgactacacatggagcagaggactgcctagtctgtccagtgggagcaga
catacttggtcctgtggaagcttgatgaaccaacgaaggggatgtaagag
gggtgaggtatgagtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83972492_83973416
seq2: B6Ng01-129B20.b_44_968

seq1  GAATTCTTATCATCATCATCATCATCATCATCAAAAACAGTTTCAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATCATCATCATCATCATCATCATCAAAAACAGTTTCAATAAA  50

seq1  ATTTGGTTTTATTCTTCTCATCTCACAAGTCTTTCCAGATACTCCCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTTTTATTCTTCTCATCTCACAAGTCTTTCCAGATACTCCCTTCC  100

seq1  TCTGTACCTACTCGAATTTACTTCTCAAAAAAACAAAAACAAAAACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACCTACTCGAATTTACTTCTCAAAAAAACAAAAACAAAAACAAAA  150

seq1  ACAAAAACAAAAACAAAAACAAAAAATCCCAGCACAACAACAAAACAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAAAAACAAAAACAAAAAATCCCAGCACAACAACAAAACAACC  200

seq1  GAAGTCAAGAAAACAGGCAGCACTCAAAAACTAACAGCAAACAGTAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAAGAAAACAGGCAGCACTCAAAAACTAACAGCAAACAGTAACCA  250

seq1  AATAAAATCACATTCCAAAATCTGTAGAGTCCATTACATCCAATTACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATCACATTCCAAAATCTGTAGAGTCCATTACATCCAATTACCTC  300

seq1  TGATCATTTAGCCTGCCATGTAGTGAATGGTATACTTACTGTTACTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATTTAGCCTGCCATGTAGTGAATGGTATACTTACTGTTACTCCAT  350

seq1  TGGGGAAAATGAATTCCCTTCTCTTCCATGGTATAAGTGACAGCTCAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAAATGAATTCCCTTCTCTTCCATGGTATAAGTGACAGCTCAGTT  400

seq1  GTTAAAATTTACCCTAGAGGATAAATTTGCATTCATTCATTCATTCATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAATTTACCCTAGAGGATAAATTTGCATTCATTCATTCATTCATTC  450

seq1  ATTCATTCATTCATTCATTCATTCATTTTATACATGTGAAATTAAATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCATTCATTCATTCATTCATTTTATACATGTGAAATTAAATATA  500

seq1  ATAAGACAAAATAAAAACTATCAGATTAAGGTTGGAAAAGACAAACCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACAAAATAAAAACTATCAGATTAAGGTTGGAAAAGACAAACCAGT  550

seq1  AAAAGGAAAACTACCCAAATGGAAGTAAAAAGAGACCCACTGATTCACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAAACTACCCAAATGGAAGTAAAAAGAGACCCACTGATTCACAT  600

seq1  ACTCAAATGTCCCATACAAAGTACTAAACTGGAACCATAATGTATGTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAATGTCCCATACAAAGTACTAAACTGGAACCATAATGTATGTCCA  650

seq1  GAAGGACTAGTGCAGACTTTTGTGGGGCCTGTGTATGCTGCTTCAGTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACTAGTGCAGACTTTTGTGGGGCCTGTGTATGCTGCTTCAGTCTC  700

seq1  TGTGAGTTCAAATGTACATTTAAGTTGATTTAAAGAGCCTTCTTTTGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTTCAAATGTACATTTAAGTTGATTTAAAGAGCCTTCTTTTGCTT  750

seq1  GGTGTCCTCTATACCTCTGGCTCTTAGACTCTTTCTGTGGTTGAGGTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCTCTATACCTCTGGCTCTTAGACTCTTTCTGTGGTTGAGGTTCT  800

seq1  CTGAACTCCAAGGGAAGGAACTTTATGAAGCTATCCCATTTAGGGCAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTCCAAGGGAAGGAACTTTATGAAGCTATCCCATTTAGGGCAAAG  850

seq1  TATCCCAAGGTTCCTTACTGTCTTCTTAACATCTGGTTATGAGTCTCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAAGGTTCCTTACTGTCTTCTTAACATCTGGTTATGAGTCTCTCC  900

seq1  ATTTGTTTCCATCTGCTGCAGAAGG  925
      |||||||||||||||||||||||||
seq2  ATTTGTTTCCATCTGCTGCAGAAGG  925


| Home | SequenceCutter | Blast | Download |