BAC Information

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BAC

Clone NameB6Ng01-130C02
Chromosome14 (Build37)
Map Location 106,403,028 - 106,404,067
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2, LOC620376, LOC100043469, Spry2
Downstream geneEG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130C02.bB6Ng01-130C02.g
ACCDH931523DH931524
length1,0411,165
definitionDH931523|Mus musculus domesticus DNA, BAC clone: B6Ng01-130C02, 5' end.DH931524|Mus musculus domesticus DNA, BAC clone: B6Ng01-130C02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagggatcaaaaagcgtggaaaaatttgaatgtcatgtcgagctg
gtatcggcttctggaataccgaaaggatctctcatctcggctccatcctt
tgtgcttgtgggatcatccaccacatccacaggggcaactggatcaggag
cctcattcttgcagcgtctcaccaatctctccggcacccaaagaggttcc
gtctggtcctgtggaaacacacaaacagaccctctcgcccacatcaacac
ctgatctactcgatccccaggggggatggacacaatacctcgtggtgatg
agaccataacctcaatcacctgtgtgtccatctggggagtcaatatgaga
gtcaagttttcactaacttcccctctgttaggcaatgatttccacgccct
tataggaatctgattcacctgctcaaacacctgcactggatatcctgtct
gttgttgtgcaaatcgaccttgatcaagcagcatatctctatcccatgca
aatttagcttgatcagtgaaaataggacatcccagcaaggagaatctatc
ctctttccagacctccggacagaaggtctgcccatagatggctgccgagg
aggcatagggagggggagcaaaagctaattcgccttcctcctctgcctca
gctcttttattttgtcctttctgtccacctgataacactgtgtctccttt
ctttttcctttttctttttaagcccttctcttcttctgacatactttctt
gttgctctgtaaggattttctgacctgtcttgactgcctctcgattcaaa
cagtaacagagtccatatatcagaacaaacaagaccaaaactatcagacc
tacccacaaagggtcaatgggagaaaaaagcataactacacagcgaggat
ctattgatcactacactgagttatcatagttccttaacttgtccccaaac
caggaaccttaacttgtcccaaagcggaacctttcgtacttgtgctgctg
ctgcaactttatgctcactctatttatcagagtcttcccaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccaatcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactatggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagataa
aaggatggaccatgtagacactagcatatcccggggatccatcccataat
cagcttccaaatgctgacacattgcatacactagcaagattatgctgaaa
ggacctgatatagctgtctcttgtcagagtatgcctgggcctagcaaaca
tagaagtggatgctcacagtcggctattggatggatcaacatggccccaa
tgacgagctagagaaagtaccaaagagtctaaagggatctgcacctataa
ggtgacaacatatgactatcagtacccggagctcttgactcttagctgct
attgcatcaaagaatgcctagtcggcatccctcgaagaaagtcatgtacg
cactttatattgcccagtacaggaacgccagtcataaaggggagtggtgg
tggcatggggaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106403028_106404067
seq2: B6Ng01-130C02.b_48_1072

seq1  GAATTCAGGGATCAAAAAGCGTGGAAAATTTTGAATGTCATGTCGAGCTG  50
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAATTCAGGGATCAAAAAGCGTGGAAAAATTTGAATGTCATGTCGAGCTG  50

seq1  GTATCGGCTTCTGGAATACCGAAAGGATCTCTCATCTCGGCTCCATCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCGGCTTCTGGAATACCGAAAGGATCTCTCATCTCGGCTCCATCCTT  100

seq1  TGTGCTTGTGGGATCATCCACCACATCCACAGGGGCAACTGGATCAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTGTGGGATCATCCACCACATCCACAGGGGCAACTGGATCAGGAG  150

seq1  CCTCATTCTTGCAGCGTCTCACCAATCTCTCTGGCACCCAAAGAGGTTCT  200
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  CCTCATTCTTGCAGCGTCTCACCAATCTCTCCGGCACCCAAAGAGGTTCC  200

seq1  GTCTGGTCCTGTGGAAACACACAAACAGACCCTCTCGCCCACATCAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTCCTGTGGAAACACACAAACAGACCCTCTCGCCCACATCAACAC  250

seq1  CTGATCTACTCGATCCCCAGGGGGGATGGACACAATACCTCGTGGTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTACTCGATCCCCAGGGGGGATGGACACAATACCTCGTGGTGATG  300

seq1  AGACCATAACCTCAATCACCTGTGTGTCCATCTGGGGAGTCAATATGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATAACCTCAATCACCTGTGTGTCCATCTGGGGAGTCAATATGAGA  350

seq1  GTCAAGTTTTCACTAACTTCCCCTCTGTTAGGCAATGATTTCCACGCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTTTTCACTAACTTCCCCTCTGTTAGGCAATGATTTCCACGCCCT  400

seq1  TATAGGAATCTGATTCACCTGCTCAAACACCTGCACTGGATATCCTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAATCTGATTCACCTGCTCAAACACCTGCACTGGATATCCTGTCT  450

seq1  GTTGTTGTGCAAATCTACCTTGATCAAGCAGCATATCTCTATCCCATGCA  500
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTGCAAATCGACCTTGATCAAGCAGCATATCTCTATCCCATGCA  500

seq1  AATTTAGCTTGATCAGTGAAAATAGGACATCCCAGCAAGGAGAATCTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGCTTGATCAGTGAAAATAGGACATCCCAGCAAGGAGAATCTATC  550

seq1  CTCTTTCCAGACCTCCGGACAGAAGGTCTGCCCATAGATGGCTGACGAGG  600
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCTTTCCAGACCTCCGGACAGAAGGTCTGCCCATAGATGGCTGCCGAGG  600

seq1  AGGCATAGGGAGGGGGAGCAGAAGCTAATTCGCCTTCCTCCTCCGCCTCA  650
      |||||||||||||||||||| |||||||||||||||||||||| ||||||
seq2  AGGCATAGGGAGGGGGAGCAAAAGCTAATTCGCCTTCCTCCTCTGCCTCA  650

seq1  GCTCTTTTATTTTGTCCTTTCTGTCCACCTGATAACACTGTGTCTCCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTTATTTTGTCCTTTCTGTCCACCTGATAACACTGTGTCTCCTTT  700

seq1  CTTTTTCCTTTTTCTTTTTAAGCCCTTCTCCTCTTCCGACATATTTTCTT  750
      |||||||||||||||||||||||||||||| ||||| |||||| ||||||
seq2  CTTTTTCCTTTTTCTTTTTAAGCCCTTCTCTTCTTCTGACATACTTTCTT  750

seq1  GTTGCTCTATAAGGATTTTCTGACCTGTCTTGACAGCCTCTACACACAGT  800
      |||||||| ||||||||||||||||||||||||| ||||||       | 
seq2  GTTGCTCTGTAAGGATTTTCTGACCTGTCTTGACTGCCTCT------CGA  794

seq1  TTCAAACAGTAACAGAGTCCATATATCAGAACAAACAAGACCAAAACTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAGTAACAGAGTCCATATATCAGAACAAACAAGACCAAAACTAT  844

seq1  CAGACCTACCCACAAAGGGTCAATGGGAGAAAAAAGCATAACTACACAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTACCCACAAAGGGTCAATGGGAGAAAAAAGCATAACTACACAGC  894

seq1  GAGGATCTATTGATCACTACACTGAGGTTATCATAGTTCCTTAACTTGTC  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAGGATCTATTGATCACTACACTGA-GTTATCATAGTTCCTTAACTTGTC  943

seq1  CCCAAACCAGGAACCTTAACTTGTCCCAAAGCCGGGAACCTTTCGTTACC  1000
      ||||||||||||||||||||||||||||||||  ||||||||||||   |
seq2  CCCAAACCAGGAACCTTAACTTGTCCCAAAGC--GGAACCTTTCGT--AC  989

seq1  TTGTGCCTGCTTGCTGGCAACTTTATGCTCACCTCTATTT  1040
      ||||| |||| |||| ||||||||||||||| ||||||||
seq2  TTGTG-CTGC-TGCT-GCAACTTTATGCTCA-CTCTATTT  1025