BAC Information

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BAC

Clone NameB6Ng01-130F20
Chromosome14 (Build37)
Map Location 89,483,456 - 89,484,614
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043317, LOC100043780, LOC668624, LOC668625, Pcdh20
Downstream geneEG328451
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130F20.bB6Ng01-130F20.g
ACCDH931697DH931698
length1,0831,167
definitionDH931697|Mus musculus domesticus DNA, BAC clone: B6Ng01-130F20, 5' end.DH931698|Mus musculus domesticus DNA, BAC clone: B6Ng01-130F20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagactttaatcataaatgggtgttggattttg
tcaaatgctttctccacatctaaggagatgatcatgtggtttttgtcttt
gagtttgttcatatacttgattacattgatggatttccctatattaaact
gtccctgcatccctgggatgaaacctacttggtcaggatggatgaatgtt
ttgatgtgttcttggattcggttagcgagaactctattgaggatttttgt
atcaatattcataagggaaattggtgtgaaattctctatctctgctgggt
ctttttgtggtttaggtatcagagtaattgtgacttcatagaatgagttg
ggtagagtaccttctgtttctattttgtggaatagtttgtgaagaactgg
gattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggcttttttttggttgggagactattaatgactgcttctatttc
tttaggggatataggaatgtttagatcattaacctgatcttgatttaaca
ctggtacctggtatctgtctagaaagatgtccatttcatccaggttctcc
agttttcttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgaatgtctcccttttcatttctaattttgttaat
taggatgctttccctgtgccctctagtgagtctggataagggtttatata
tcttgttgattttctcaaagtaccagctcttcaattgggtgattctttga
aatagtttttcttgtttccacttggttgattcacccctgagttgattatt
tcctgccttctactcctcttgggtaaatttgcttcttttgttctagagct
tttggtgtgttgtcaagctgctatgtgtctctctctagttcttttggagg
cactcagagctttgagttttctctaagaaatgctttcatatgggtcccaa
agtttgagatagcttgggcttcatattcataaactccaaaccttcctgga
tttatttcttaatccttccttgatcaagggtat
gaattctctgtttagatctgaaccccatttttaaattgggtcatttggat
tttaggaatttaacttcttgagttctttgtatactttggagtttagcctt
ctattaaatgtagggttagtgaagatactttcctattccagtctgcacgc
tcccattttgtcctactgactgtttttcaccttacataagctttcagttt
catgaggtcccatttatcaattattgatcttagagcctgagcctgagtgt
tctgttcaggagattttcccctatagcaatgtgtttgaagatatttccta
ctttctcttctcttgattaagcttgactgaggaaaagctttcaccagcac
atctagtagcatgtatctgtggatattctaacttttgtcaaattcacaag
taagaacaaccaccattatacatttacaaaattagaagtaatataaataa
taacttatcacttaccaaattttgtctttttattttgttttctgttttaa
ttcagtcaataataggaaatactgatcttccatctacaagagagtaatat
agcatttaacattatagacgagttctgaaaaaaaatgcatgtggcatgat
tttctcatcatttgaatactgcagaatgcatttgtcatgtgaagatagtg
aaatcattagtaagtgacataatttaatagaaccattgtgatatatgaag
tatgccattcaatgaaatgtcactttcctacctgttactgtataacatat
acatctgagattagggcaagaactacatcttgacagtgaaacatattata
ggtttatacacatatgtttaacttaggcagttaggatactcacaggttag
gcagagaggatgaagaattgaataaagacaggtataaatggggtggacaa
agaatcagatatttgaacaccatgaatatactagcttgtgcaagtaactg
gatatgagttgaacaaacagaactagttttaattggttacattgagttga
atattctagactagtttgacatcctcataatacagcttgtgatcattatt
cacactgtgtaaacacagctttcacattgcagctacttattttactttca
tggacttttatggaccaacatctgttttcaattatcagaagagagaaact
ggaccttttggacctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_89483456_89484614
seq2: B6Ng01-130F20.g_66_1232

seq1  GAATTCTCTGTTTAGATCTGAACCCCATTTTTAAATTGGGTCATTTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGATCTGAACCCCATTTTTAAATTGGGTCATTTGGAT  50

seq1  TTTAGGAATTTAACTTCTTGAGTTCTTTGTATACTTTGGAGTTTAGCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAATTTAACTTCTTGAGTTCTTTGTATACTTTGGAGTTTAGCCTT  100

seq1  CTATTAAATGTAGGGTTAGTGAAGATACTTTCCTATTCCAGTCTGCACGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAATGTAGGGTTAGTGAAGATACTTTCCTATTCCAGTCTGCACGC  150

seq1  TCCCATTTTGTCCTACTGACTGTTTTTCACCTTACATAAGCTTTCAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTTGTCCTACTGACTGTTTTTCACCTTACATAAGCTTTCAGTTT  200

seq1  CATGAGGTCCCATTTATCAATTATTGATCTTAGAGCCTGAGCCTGAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGTCCCATTTATCAATTATTGATCTTAGAGCCTGAGCCTGAGTGT  250

seq1  TCTGTTCAGGAGATTTTCCCCTATAGCAATGTGTTTGAAGATATTTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCAGGAGATTTTCCCCTATAGCAATGTGTTTGAAGATATTTCCTA  300

seq1  CTTTCTCTTCTCTTGATTAAGCTTGACTGAGGAAAAGCTTTCACCAGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTTCTCTTGATTAAGCTTGACTGAGGAAAAGCTTTCACCAGCAC  350

seq1  ATCTAGTAGCATGTATCTGTGGATATTCTAACTTTTGTCAAATTCACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTAGCATGTATCTGTGGATATTCTAACTTTTGTCAAATTCACAAG  400

seq1  TAAGAACAACCACCATTATACATTTACAAAATTAGAAGTAATATAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACAACCACCATTATACATTTACAAAATTAGAAGTAATATAAATAA  450

seq1  TAACTTATCACTTACCAAATTTTGTCTTTTTATTTTGTTTTCTGTTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTATCACTTACCAAATTTTGTCTTTTTATTTTGTTTTCTGTTTTAA  500

seq1  TTCAGTCAATAATAGGAAATACTGATCTTCCATCTACAAGAGAGTAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCAATAATAGGAAATACTGATCTTCCATCTACAAGAGAGTAATAT  550

seq1  AGCATTTAACATTATAGACGAGTTCTGAAAAAAAATGCATGTGGCATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTAACATTATAGACGAGTTCTGAAAAAAAATGCATGTGGCATGAT  600

seq1  TTTCTCATCATTTGAATACTGCAGAATGCATTTGTCATGTGAAGATAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATCATTTGAATACTGCAGAATGCATTTGTCATGTGAAGATAGTG  650

seq1  AAATCATTAGTAAGTGACATAATTTAATAGAACCATTGTGATATATGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTAGTAAGTGACATAATTTAATAGAACCATTGTGATATATGAAG  700

seq1  TATGCCATTCAATGAAATGTCACTTTCCTACCTGTTACTGTATAACATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCATTCAATGAAATGTCACTTTCCTACCTGTTACTGTATAACATAT  750

seq1  ACATCTGAGATTAGGGCAAGAACTACATCTTGACAGTGAAACATATTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGAGATTAGGGCAAGAACTACATCTTGACAGTGAAACATATTATA  800

seq1  GGTTTATACACATATGTTTAACTTAGGCAGTTAGGATACTCACAGGTTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATACACATATGTTTAACTTAGGCAGTTAGGATACTCACAGGTTAG  850

seq1  GCAGAGAGGATGAAGAATTGAATAAAGACAGGTATAAAATGGGGTGGACA  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCAGAGAGGATGAAGAATTGAATAAAGACAGGTAT-AAATGGGGTGGACA  899

seq1  AAGAATCAGATATTTGAACACCATGAATATACTAGCTTGTGCAAGTAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCAGATATTTGAACACCATGAATATACTAGCTTGTGCAAGTAACT  949

seq1  GGATATGAGGTTGAACAAACAGAACTAGTTTTAATTGGTTACATTGAGTT  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGA-GTTGAACAAACAGAACTAGTTTTAATTGGTTACATTGAGTT  998

seq1  GAATATTCTAGACTAGTTTGACAATCTCATAATACAGCTTGTGATTCATA  1050
      |||||||||||||||||||||||  ||||||||||||||||||||   ||
seq2  GAATATTCTAGACTAGTTTGACATCCTCATAATACAGCTTGTGATCATTA  1048

seq1  TTCACACTGTGT-AACACAGCTTTCACATTGCAGCTACTAATTTTACCTT  1099
      |||||||||||| |||||||||||||||||||||||||| ||||||| ||
seq2  TTCACACTGTGTAAACACAGCTTTCACATTGCAGCTACTTATTTTACTTT  1098

seq1  CAT-GAC-TTTATGGA-CAACATCTG-TTTCAA-TATCAGA--AGAGAAA  1142
      ||| ||| |||||||| ||||||||| |||||| |||||||  |||||||
seq2  CATGGACTTTTATGGACCAACATCTGTTTTCAATTATCAGAAGAGAGAAA  1148

seq1  CTG--ACTTTTGAACCTAA  1159
      |||   |||||| ||||||
seq2  CTGGACCTTTTGGACCTAA  1167