BAC Information

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BAC

Clone NameB6Ng01-130L04
Chromosome14 (Build37)
Map Location 51,974,554 - 51,975,506
singlet/doubletsinglet
Overlap genenone
Upstream geneTlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp, LOC667034, LOC667210, Rnase10, Rnase9, Rnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203
Downstream geneLOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130L04.bB6Ng01-130L04.g
ACCDH931948DH931949
length1,149949
definitionDH931948|Mus musculus domesticus DNA, BAC clone: B6Ng01-130L04, 5' end.DH931949|Mus musculus domesticus DNA, BAC clone: B6Ng01-130L04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacatgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcataccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacattcctccactgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagaaatacctctcctgggc
atagatccagaagatgtcccaacagtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggtcgtcatcatcctgatttaggtaacccaatcacaaag
gaactctcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagaccaaagtgtgaacactttgccccttcttagaataggaaa
caaaacacccatggaaggagttacagagacaaaatttggaagtgtgacga
aaggatggaccatctagtgattgccatatccagagatccatcccatggtc
agcttccaaacgctgacaccattgcatacactaacaagattttgctgaaa
ggacccagatatagctgtcttttgtgagactatgccaggacctagcaaac
acagaagctcacaatcagctattggatggatcacagggcctccattggag
gagctagagaaagcaccaaggaactaaaggaactgcaatcctatagtgac
aacatatgaacttacagtacccagagctctgtctctagctgctatgtatc
aaagatgcctagtggccatcacttgaaagagagcccatgacttgcaactt
attggccagtcgggaacccaggtcaaattggggagtgtgtgtagggaac
gaattccttccttttttctttcttctattttttgaaattttttcctttat
aattttaaactccagattttttcctctcctggtccacccccataccatat
cccataccttcacccaacaccccctgtgtccacaggatatccccaccccc
accagacctttgaactctctagggcctccattctcttgaggcttgtgtgc
attttctctgactgaatctacacctggcagtcctctgttgtatatatttt
gggggcctcataaaagctgttgtatgcagcctggttggtattgcagtgtc
tgagagatctctagggtccaggtttactgagtcttcaggtcctccaacaa
ggttaccccccccccagcttcttccagctttccaaaaacaggggttagca
gctttccataattcaaccacaggggtcagcacacaaccaatggttagaag
cactgaccaccagagaactgctaaacctgatatacaacttcagcaaagtg
gctggatataaattatgtcaaacaaatcagtatccttcttttactcaaaa
aataaacaggctgagaaagaaattaggaaaaccgcacccttctcaatagt
cacaaacaaaagaaaataccttgaaggagactctaaccaggcaagtgaaa
catctgtatgacaaaacttcaagtctctgaagaaagaaatcaaagaacat
gtcagaaggtagaaagatctccccttctcatggattggcaggattgatat
agtaaaatggcctttatgcatctacatattcaatgtactcctcatcaaat
tcaaataaattgttcttgtacttagaaagcaatttgtaaattcatttaga
ataacaaaaaaatgccttagaagggcaacaaaatcttcaccaggagaaat
ttagaacaagatgtggaaaggagactgaagcaaagccatcatgagtctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51974554_51975506
seq2: B6Ng01-130L04.g_68_1011

seq1  GAATTCCTTCCTTTTTTCTTTCTTCTATTTTTTGAAATTTTTTCCTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTTTTTTCTTTCTTCTATTTTTTGAAATTTTTTCCTTTAT  50

seq1  AATTTTAAACTCCAGATTTTTTCCTCTCCTGGTCCACCCCCATACCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAACTCCAGATTTTTTCCTCTCCTGGTCCACCCCCATACCATAT  100

seq1  CCCATACCTTCACCCAACACCCCCTGTGTCCACAGGATATCCCCACCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACCTTCACCCAACACCCCCTGTGTCCACAGGATATCCCCACCCCC  150

seq1  ACCAGACCTTTGAACTCTCTAGGGCCTCCATTCTCTTGAGGCTTGTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACCTTTGAACTCTCTAGGGCCTCCATTCTCTTGAGGCTTGTGTGC  200

seq1  ATTTTCTCTGACTGAATCTACACCTGGCAGTCCTCTGTTGTATATATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTCTGACTGAATCTACACCTGGCAGTCCTCTGTTGTATATATTTT  250

seq1  GGGGGCCTCATAAAAGCTGTTGTATGCAGCCTGGTTGGTATTGCAGTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCCTCATAAAAGCTGTTGTATGCAGCCTGGTTGGTATTGCAGTGTC  300

seq1  TGAGAGATCTCTAGGGTCCAGGTTTACTGAGTCTTCAGGTCCTCCAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGATCTCTAGGGTCCAGGTTTACTGAGTCTTCAGGTCCTCCAACAA  350

seq1  GGTTACCCCCCCCCCCAGCTTCTTCCAGCTTTCCAAAAACAGGGGTTAGC  400
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTA-CCCCCCCCCCAGCTTCTTCCAGCTTTCCAAAAACAGGGGTTAGC  399

seq1  AGCTTTCCATAATTCAACCACAGGGGTCAGCACACAACCAATGGTTAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCCATAATTCAACCACAGGGGTCAGCACACAACCAATGGTTAGAA  449

seq1  GCACTGACCACCAGAGAACTGCTAAACCTGATATACAACTTCAGCAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGACCACCAGAGAACTGCTAAACCTGATATACAACTTCAGCAAAGT  499

seq1  GGCTGGATATAAATTATGTCAAACAAATCAGTATCCTTCTTTTACTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGATATAAATTATGTCAAACAAATCAGTATCCTTCTTTTACTCAAA  549

seq1  AAATAAACAGGCTGAGAAAGAAATTAGGAAAACCGCACCCTTCTCAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACAGGCTGAGAAAGAAATTAGGAAAACCGCACCCTTCTCAATAG  599

seq1  TCACAAACAAAAGAAAATACCTTGAAGGAGACTCTAACCAGGCAAGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAACAAAAGAAAATACCTTGAAGGAGACTCTAACCAGGCAAGTGAA  649

seq1  ACATCTGTATGACAAAACTTCAAGTCTCTGAAGAAAGAAATCAAAGAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTATGACAAAACTTCAAGTCTCTGAAGAAAGAAATCAAAGAACA  699

seq1  TGTCAGAAGGTAGAAAGATCTCCCCTTCTCATGGATTGGCAGGATTGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAAGGTAGAAAGATCTCCCCTTCTCATGGATTGGCAGGATTGATA  749

seq1  TAGTAAAAATGGCCTTTATGCATCTACATATTCAATGTACTCCTCATCAA  800
      |||| ||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAGT-AAAATGGCCTTTATGCATCTACATATTCAATGTACTCCTCATC-A  797

seq1  AATTCAAAATAAATTGTTCTTGTACTTAGAAAAGCAATTTGTAAATTCAT  850
      ||||| ||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATTC-AAATAAATTGTTCTTGTACTTAG-AAAGCAATTTGTAAATTCAT  845

seq1  TTAGAATAACAAAAAAAATGCCTTAGAAGGGCAAACAAAATCTTCA-CAG  899
      |||||||||| ||||||||||||||||||||| ||||||||||||| |||
seq2  TTAGAATAAC-AAAAAAATGCCTTAGAAGGGC-AACAAAATCTTCACCAG  893

seq1  GAGGAAATTTAGAGACAAGATGTGGAACAGAGACTGAAGCAAAGGCCATC  949
      || |||||||||| |||||||||||||  |||||||||||||| ||||||
seq2  GA-GAAATTTAGA-ACAAGATGTGGAAAGGAGACTGAAGCAAA-GCCATC  940

seq1  ATGA  953
      ||||
seq2  ATGA  944