BAC Information

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BAC

Clone NameB6Ng01-131O01
Chromosome14 (Build37)
Map Location 41,108,331 - 41,109,023
singlet/doubletsinglet
Overlap geneLOC218945
Upstream geneNrg3, LOC100040439
Downstream geneLOC100040470, LOC382876, Sh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093, EG666099, LOC100040545
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131O01.bB6Ng01-131O01.g
ACCDH932824DH932825
length1,001698
definitionDH932824|Mus musculus domesticus DNA, BAC clone: B6Ng01-131O01, 5' end.DH932825|Mus musculus domesticus DNA, BAC clone: B6Ng01-131O01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcccctgtacccatatgttcaaggctcttccccactttctctt
ctataagtttcaatgtatctgaattttatgtgaagtgtattttatgtgaa
ggtccttgatccacttggacttgagctttgtaccgggagataagtatggg
tcgatttgccttcttctacctgctaaccaccagttgggccagcaccattt
gttgaaaatgctgtcttctttccactagatgattttagtcctttgtcaaa
gatcaattgaccatagttgtgtgggttcatttctgggtcttcatttctat
tccattgatttacctgtctgtcaccgtaccaatactatgcagttttgttt
ttgtttttatttttgtttttaatcacaattgctctgtagtagagcttaat
atcaggcatggtgattccaccagaggttcttttactgttgaaaatagttt
ttgctatcctgggtttttgttattccagatgaatttgcaaattgctcttt
ctaacttggtgaggaatttagttggaattttgatgggggttgcattgaat
ctgtagatttcttttggcatgatagccaattttttactatattcgttctc
ccaatccatgagcatgggagatctttccatattctgagatcttcttcgat
ttctttcttaagagacttgaagtgcttgtaatacaaatctttcactttcc
ttagagtcacaccaaggtattttatattacttgttactattatgaagggt
gttgtttccctaatttatttcttaggctgtttatcctttctgtagaggaa
ggccactggtttgtttgaattgattttacatccaaccactttactgaagt
tgtttcacaagtttaggagttctctgatggaatttttggagacacttaag
tatactatcatatcatcttccaatagtgatattttgacctcaattccatt
tgtatacctttgatcctccttttgttgtctaattgctctggataggactt
c
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaggatgtggagaaagaggaacactcc
tccattgttattcttcagtaatttcagtaaacatgaaaaaaatttaaaaa
agcaaaacagaagagtcctgaggtgaggtagaactcttaagcaggtagaa
cattatggcagacatgcataatcttgtagaaagattggagagggcagtgg
gctccctggaggcagtgtcatgtacctctgacatgcactgtgggtaagga
gacagtctgtcaagaggagcagttccatatgtgcaagcatttgacttgct
gcttgccaagtccatggcagaatacatgaaggtgagtaaggaggttgggg
gagacatgcagaaacgtgtggagaaggtccacataagcctgaatttgaag
cgagctttcctgattacggcttctcagtggcagcagccagccagtagtaa
actttctgatttgttgataactttctcagagctgatccaaagaagtttgt
accttctgggagaagagccgagacagcaaaattttcaatcatgtatcagc
tgtcagtgaaagcatccagaccctggggctgggtggctctggctgagaaa
acctggggcctgttatgaaagagatgaatggtgtggccatgttttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_41108331_41109023
seq2: B6Ng01-131O01.g_69_766 (reverse)

seq1  TTTAAAACATGGCCACACCATTCATCTCTTTCATAACAGG-CCCAGG-TT  48
      |||||||||||||||||||||||||||||||||||||||| |||||| ||
seq2  TTTAAAACATGGCCACACCATTCATCTCTTTCATAACAGGCCCCAGGTTT  50

seq1  TCTCAGCCAGAGCCACCCAG-CCCAGGGTCTGGATGCTTTCACTGACAGC  97
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTCAGCCAGAGCCACCCAGCCCCAGGGTCTGGATGCTTTCACTGACAGC  100

seq1  TGATACATGATTGAAAATTTTGCTGTCTCGGCTCTTCTCCCAGAAGGTAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACATGATTGAAAATTTTGCTGTCTCGGCTCTTCTCCCAGAAGGTAC  150

seq1  -AACTTC-TTGGATCAGCTCTGAGAAAGTTATCAACAAATCAGAAAGTTT  195
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCTTTGGATCAGCTCTGAGAAAGTTATCAACAAATCAGAAAGTTT  200

seq1  ACTACTGGCTGGCTGCTGCCACTGAGAAGCCGTAATCAGGAAAGCTCGCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGGCTGGCTGCTGCCACTGAGAAGCCGTAATCAGGAAAGCTCGCT  250

seq1  TCAAATTCAGGCTTATGTGGACCTTCTCCACACGTTTCTGCATGTCTCCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTCAGGCTTATGTGGACCTTCTCCACACGTTTCTGCATGTCTCCC  300

seq1  CCAACCTCCTTACTCACCTTCATGTATTCTGCCATGGACTTGGCAAGCAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTCCTTACTCACCTTCATGTATTCTGCCATGGACTTGGCAAGCAG  350

seq1  CAAGTCAAATGCTTGCACATATGGAACTGCTCCTCTTGACAGACTGTCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAAATGCTTGCACATATGGAACTGCTCCTCTTGACAGACTGTCTC  400

seq1  CTTACCCACAGTGCATGTCAGAGGTACATGACACTGCCTCCAGGGAGCCC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCCACAGTGCATGTCAGAGGTACATGACACTGCCTCCAGGGAGCCC  450

seq1  ACTGCCCTCTCCAATCTTTCTACAAGATTATGCATGTCTGCCATAATGTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCTCTCCAATCTTTCTACAAGATTATGCATGTCTGCCATAATGTT  500

seq1  CTACCTGCTTAAGAGTTCTACCTCACCTCAGGACTCTTCTGTTTTGCTTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGCTTAAGAGTTCTACCTCACCTCAGGACTCTTCTGTTTTGCTTT  550

seq1  TTTAAATTTTTTTCATGTTTACTGAAATTACTGAAGAATAACAATGGAGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTTTTCATGTTTACTGAAATTACTGAAGAATAACAATGGAGG  600

seq1  AGTGTTCCTCTTTCTCCACATCCTCCCTGATGATTAAGGATGTTGAACAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCCTCTTTCTCCACATCCTCCCTGATGATTAAGGATGTTGAACAT  650

seq1  TTTTTTCAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAGGTGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTC  698