BAC Information

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BAC

Clone NameB6Ng01-132E19
Chromosome14 (Build37)
Map Location 102,570,638 - 102,738,130
singlet/doubletdoublet
Overlap genenone
Upstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
Downstream geneLOC669278, Kctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132E19.bB6Ng01-132E19.g
ACCDH933138DH933139
length1,1151,022
definitionDH933138|Mus musculus domesticus DNA, BAC clone: B6Ng01-132E19, 5' end.DH933139|Mus musculus domesticus DNA, BAC clone: B6Ng01-132E19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,570,638 - 102,571,774)(102,737,102 - 102,738,130)
sequence
gaattcaatgcaagtttagcaactttgaattttgctccattatttccttg
gaagcacacttccatcatgctttcaatattaaacatgcaaacatgacagt
caacagcgtccttgctatttactgtaaacaacagcaaataaaagtggttt
gaaagctgtttgttaatttcactgctgcataaaattattttgagtcaatg
aacccataaaaaagtctggcgataaaagaaagccttgtcctcgatgctta
aatgggacacgcttggatgagtgcggtgggaccgtgaggtgagcgagcag
cttcatcctgaggtctttgctgttctcagctactctaggtttcagtcttt
agtgggataaccataccctttctaggtcctcttcatctctctgctgtatc
aaaacttgctctcgtactattcaaaaacctgggctggctcctacgttttt
gaaatgagaagaatcctgaagcctaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaatggaaattgaaagcataatgtaaatcaggat
ttaggggaatatactgcatgttctaaaataacctcacaagaatggtgctc
tggcttgttttgcagagtagtgagacacctagaaaatattccaatgttca
ggttgttctggaaatacagatacagcaggggacaccccagactgcttgaa
atggttccagccacacctattactctattctgctagcacatgacctcact
ggggtttgaagcatgtgttccattctgcttagtatgtggacttgaaaaac
aagtggtgactgttgccagatctcatcctaacaagaaatttatttagtaa
gatgtttttgtcagtgtgtttcacctaaggacctaagaaaagcttatgtg
ccatgttggtctagcaagcttctgctgagtgagttcaaacagtagaataa
tttaaatcacagtctgtcgtattacgtggattttcttaactatgcaaatt
gactggtttggaggttccttaactagcacatgtcagctgattagatatta
ttttggagagaaaattaaaagaactcactgtacttgatcagtacattcga
ttaacttcatatcat
gaattctgaggatccagccaataagcagcctttctgcgaggtctttgctt
cagatcctggattcaggctcctgattacacttcttctcctggtggactgt
aagctgtaagatgaaattaacccttccctcctcaggtggcttgggagcat
ggtacttactgcatccacagaaacaaagccaggttatactgggaaggaat
tctttcaggtataatccaaggagcccatatattgatgatatgaatattaa
tgagcagcgcttgtctctcctgcacttgatgagtgtgagactaattacta
ttagacagggttcatatagaaattactcactgcaccactgaatctccacc
attacacaggcaggcatgatgtatatctctataaagagagcaattgttgc
tagaaagttattttccactggtctttttgttttggcaaaaaaaaaaaagt
tgatatttattgtcttaaagatcagctaaactttgaaatgtatactcttc
agaagtcaagaacccccacaaaataccctgagaaccccacagttcccatg
ttgtggagggaaactgagaccgatgcagatagatacttatagctaaccat
tggactgaggtctgggacccctatgaaagagttagtggaaggattgaagg
aactgaaggggaaggcaactccatgagaagaacaacggtatcaactaaac
cagacccctcagacctcccagagactaagccaccaaccaaagcacataca
tgggctgatccttgggccctggcatacacgtagcagaggactgccttgtc
tggcctcagtgggagaggatgcatctaatcctgaagatgctccaggggag
gtggatgcctaggggacatgagctgagagtgcatgggtaggtgacagagg
tggggtatggggaacactccctcagagcgtaaggggagagagatggggtg
agaatctctttgcagggttctaacattttgagttgcaataatgaaacaat
aaaaaagtaatgcaacaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102570638_102571774
seq2: B6Ng01-132E19.b_45_1159

seq1  GAATTCAATGCAAGTTTAGCAACTTTGAATTTTGCTCCATTATTTCCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCAAGTTTAGCAACTTTGAATTTTGCTCCATTATTTCCTTG  50

seq1  GAAGCACACTTCCATCATGCTTTCAATATTAAACATGCAAACATGACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACACTTCCATCATGCTTTCAATATTAAACATGCAAACATGACAGT  100

seq1  CAACAGCGTCCTTGCTATTTACTGTAAACAACAGCAAATAAAAGTGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCGTCCTTGCTATTTACTGTAAACAACAGCAAATAAAAGTGGTTT  150

seq1  GAAAGCTGTTTGTTAATTTCACTGCTGCATAAAATTATTTTGAGTCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTGTTTGTTAATTTCACTGCTGCATAAAATTATTTTGAGTCAATG  200

seq1  AACCCATAAAAAAGTCTGGCGATAAAAGAAAGCCTTGTCCTCGATGCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATAAAAAAGTCTGGCGATAAAAGAAAGCCTTGTCCTCGATGCTTA  250

seq1  AATGGGACACGCTTGGATGAGTGCGGTGGGACCGTGAGGTGAGCGAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGACACGCTTGGATGAGTGCGGTGGGACCGTGAGGTGAGCGAGCAG  300

seq1  CTTCATCCTGAGGTCTTTGCTGTTCTCAGCTACTCTAGGTTTCAGTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCCTGAGGTCTTTGCTGTTCTCAGCTACTCTAGGTTTCAGTCTTT  350

seq1  AGTGGGATAACCATACCCTTTCTAGGTCCTCTTCATCTCTCTGCTGTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGATAACCATACCCTTTCTAGGTCCTCTTCATCTCTCTGCTGTATC  400

seq1  AAAACTTGCTCTCGTACTATTCAAAAACCTGGGCTGGCTCCTACGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGCTCTCGTACTATTCAAAAACCTGGGCTGGCTCCTACGTTTTT  450

seq1  GAAATGAGAAGAATCCTGAAGCCTAAAAAAAAAAAAAAAAAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGAAGAATCCTGAAGCCTAAAAAAAAAAAAAAAAAAAAAAAAAA  500

seq1  AAAAAAAAAAAAAAAAAAAATGAAATTGAAAGCATAATGTAAATCAGGAT  550
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAATGGAAATTGAAAGCATAATGTAAATCAGGAT  550

seq1  TTAGGGGAATATACTGCATGTTCTAAAATAACCTCACAAGAATGGTGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGGAATATACTGCATGTTCTAAAATAACCTCACAAGAATGGTGCTC  600

seq1  TGGCTTGTTTTGCAGAGTAGTGAGACACCTAGAAAATATTCCAATGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGTTTTGCAGAGTAGTGAGACACCTAGAAAATATTCCAATGTTCA  650

seq1  GGTTGTTCTGGAAATACAGATACAGCAGGGGACACCCCAGACTGCTTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTCTGGAAATACAGATACAGCAGGGGACACCCCAGACTGCTTGAA  700

seq1  ATGGTTCCAGCCACACCTATTACTCTATTCTGCTAGCACATGACCTCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCCAGCCACACCTATTACTCTATTCTGCTAGCACATGACCTCACT  750

seq1  GGGGTTTGAAGCATGTGTTCCATTCTGCTTAGTATGTGGACTTGAAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTTGAAGCATGTGTTCCATTCTGCTTAGTATGTGGACTTGAAAAAC  800

seq1  AAGTGGTGACTGTTGCCAGATCTCATCCTAACAAGAAATTTATTTAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTGACTGTTGCCAGATCTCATCCTAACAAGAAATTTATTTAGTAA  850

seq1  GATGTTTTTGTCAGTGTGTTTCACCTAAGGACCTAAGAAAAGCTTATGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTTGTCAGTGTGTTTCACCTAAGGACCTAAGAAAAGCTTATGTG  900

seq1  CCATGTTGGTCTAGCAAGCTTCTTGCTGAGTGAGTTCAAACAAGTAGAAA  950
      |||||||||||||||||||||| |||||||||||||||||| ||||||| 
seq2  CCATGTTGGTCTAGCAAGCTTC-TGCTGAGTGAGTTCAAAC-AGTAGAA-  947

seq1  TAAATTTAAATCACAGTCTTGTCGTAATTTACGTTGAATTTTCTTAACTA  1000
        |||||||||||||||| |||||||  ||||| || |||||||||||||
seq2  -TAATTTAAATCACAGTC-TGTCGTA--TTACG-TGGATTTTCTTAACTA  992

seq1  TGCAAATTTGACCTGGTTTGGAGGTCTCCTTAACTAGCAACATGTCAGCT  1050
      |||||| |||| ||||||||||||| |||||||||||| |||||||||||
seq2  TGCAAA-TTGA-CTGGTTTGGAGGT-TCCTTAACTAGC-ACATGTCAGCT  1038

seq1  GGAATTTAAGGATATTTATTTTGAGAGAAAATTAAAAAGAAACTTCACTT  1100
      |  |||    ||||||  ||| ||||||||||| |||||||   |||| |
seq2  G--ATT---AGATATTATTTTGGAGAGAAAATT-AAAAGAA--CTCAC-T  1079

seq1  GTACTTGAATCAGTAACATTCAGATTTAACT---TATCAT  1137
      ||||||| |||||| |||||| || ||||||   ||||||
seq2  GTACTTG-ATCAGT-ACATTC-GA-TTAACTTCATATCAT  1115

seq1: chr14_102737102_102738130
seq2: B6Ng01-132E19.g_68_1089 (reverse)

seq1  TTCTTTGTTTGCTTTACTTTTTTTTATTGTTTCATTTATTTACAACTC-A  49
      ||||||| |||| ||||  |||||||||||||||||   || |||||| |
seq2  TTCTTTG-TTGCATTAC--TTTTTTATTGTTTCATT--ATTGCAACTCAA  45

seq1  AATGTTGGTAGCCCCTGC-AAGAGATTCTTCACCCCATCCTCTCTCCCCT  98
      |||||| | |  |||||| ||||||||| ||||||||| |||||||||||
seq2  AATGTTAGAA--CCCTGCAAAGAGATTC-TCACCCCAT-CTCTCTCCCCT  91

seq1  TACGCTCTGAGGGAGTGTTCCCCATACCCCACCTCTGTCACCTACCCATG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTCTGAGGGAGTGTTCCCCATACCCCACCTCTGTCACCTACCCATG  141

seq1  CACTCTCAGCTCATGTCCCCTAGGCATCCACCTCCCCTGGAGCATCTTCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCAGCTCATGTCCCCTAGGCATCCACCTCCCCTGGAGCATCTTCA  191

seq1  GGATTAGATGCATCCTCTCCCACTGAGGCCAGACAAGGCAGTCCTCTGCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAGATGCATCCTCTCCCACTGAGGCCAGACAAGGCAGTCCTCTGCT  241

seq1  ACGTGTATGCCAGGGCCCAAGGATCAGCCCATGTATGTGCTTTGGTTGGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTATGCCAGGGCCCAAGGATCAGCCCATGTATGTGCTTTGGTTGGT  291

seq1  GGCTTAGTCTCTGGGAGGTCTGAGGGGTCTGGTTTAGTTGATACCGTTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGTCTCTGGGAGGTCTGAGGGGTCTGGTTTAGTTGATACCGTTGT  341

seq1  TCTTCTCATGGAGTTGCCTTCCCCTTCAGTTCCTTCAATCCTTCCACTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCATGGAGTTGCCTTCCCCTTCAGTTCCTTCAATCCTTCCACTAA  391

seq1  CTCTTTCATAGGGGTCCCAGACCTCAGTCCAATGGTTAGCTATAAGTATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCATAGGGGTCCCAGACCTCAGTCCAATGGTTAGCTATAAGTATC  441

seq1  TATCTGCATCGGTCTCAGTTTCCCTCCACAACATGGGAACTGTGGGGTTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCATCGGTCTCAGTTTCCCTCCACAACATGGGAACTGTGGGGTTC  491

seq1  TCAGGGTATTTTGTGGGGGTTCTTGACTTCTGAAGAGTATACATTTCAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTATTTTGTGGGGGTTCTTGACTTCTGAAGAGTATACATTTCAAA  541

seq1  GTTTAGCTGATCTTTAAGACAATAAATATCAACTTTTTTTTTTTTGCCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGCTGATCTTTAAGACAATAAATATCAACTTTTTTTTTTTTGCCAA  591

seq1  AACAAAAAGACCAGTGGAAAATAACTTTCTAGCAACAATTGCTCTCTTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAGACCAGTGGAAAATAACTTTCTAGCAACAATTGCTCTCTTTA  641

seq1  TAGAGATATACATCATGCCTGCCTGTGTAATGGTGGAGATTCAGTGGTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATATACATCATGCCTGCCTGTGTAATGGTGGAGATTCAGTGGTGC  691

seq1  AGTGAGTAATTTCTATATGAACCCTGTCTAATAGTAATTAGTCTCACACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTAATTTCTATATGAACCCTGTCTAATAGTAATTAGTCTCACACT  741

seq1  CATCAAGTGCAGGAGAGACAAGCGCTGCTCATTAATATTCATATCATCAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGTGCAGGAGAGACAAGCGCTGCTCATTAATATTCATATCATCAA  791

seq1  TATATGGGCTCCTTGGATTATACCTGAAAGAATTCCTTCCCAGTATAACC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGGCTCCTTGGATTATACCTGAAAGAATTCCTTCCCAGTATAACC  841

seq1  TGGCTTTGTTTCTGTGGATGCAGTAAGTACCATGCTCCCAAGCCACCTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTGTTTCTGTGGATGCAGTAAGTACCATGCTCCCAAGCCACCTGA  891

seq1  GGAGGGAAGGGTTAATTTCATCTTACAGCTTACAGTCCACCAGGAGAAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAAGGGTTAATTTCATCTTACAGCTTACAGTCCACCAGGAGAAGA  941

seq1  AGTGTAATCAGGAGCCTGAATCCAGGATCTGAAGCAAAGACCTCGCAGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAATCAGGAGCCTGAATCCAGGATCTGAAGCAAAGACCTCGCAGAA  991

seq1  AGGCTGCTTATTGGCTGGATCCTCAGAATTC  1029
      |||||||||||||||||||||||||||||||
seq2  AGGCTGCTTATTGGCTGGATCCTCAGAATTC  1022