BAC Information

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BAC

Clone NameB6Ng01-133A14
Chromosome14 (Build37)
Map Location 113,293,655 - 113,412,613
singlet/doubletdoublet
Overlap geneLOC100043509
Upstream geneLOC100043501, EG223186
Downstream geneTpm3-rs7, LOC100043510, LOC382947
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133A14.bB6Ng01-133A14.g
ACCDH933693DH933694
length1,175937
definitionDH933693|Mus musculus domesticus DNA, BAC clone: B6Ng01-133A14, 5' end.DH933694|Mus musculus domesticus DNA, BAC clone: B6Ng01-133A14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,293,655 - 113,294,864)(113,411,668 - 113,412,613)
sequence
gaattcttttaaaaaatatacttggctgtaaattatctgtagccaaaatt
tacagtagctagggtaacaaggttttctgtgctcagtagatcgcccatat
gttaatatatgcattcaaataattattactaagctttacagtttctcttt
taaacatgagacagaaaaactgtttatattatcaactgatatataatgag
atgctgaagtcaatctaaacctgatccttcacttgctgctgtgattcagt
ttctgcatttggcaccatcagaacagcatgcaatacgataacgtctctgc
atacagaaatctacagagacagcttcacttcttactgatatctaagttca
cacaccaattcacaaagtgtgtgtttgattcctttaccttatgacagata
gctgctctgcctggctcttattgtcatggttcagatttcttctaaaaaga
acagctgggacaaggaaaaggaatgtgtttactgaagagtgtgtacgatg
agcctctgttttatttgaagccatttctctgtagaatgtataagggtaaa
gtagataaaactcagtctggagacgcaatactaaaacaggcaccactcaa
ttgaattagccgacagtaatcaatacattttttcttccttgttttataag
gcatataattatatattttgtcttattatattataatcttcctctgtagt
tattattaattattattattccttttaagattgccaaaataaataagtgc
acatataaattattaaaagcatagttatgtttactcattgtatacttcat
gtgaaagaaattttattttttgaagtaagctattctgtcctattataaaa
gaaaatatttggtgagttaaatacattcaaatgcctttatttcctaaata
ccaaatattgtgttactaacattaaaaaaaacggaatttgcttcaaaata
attgaaatagaatataaaattaaattattgaatacatactaaatatctat
ggaaatgaacactaggagacactttataaaatcaagactttgattaagac
agtcatagctatttttatatttattattgaactataaaaattaatagaaa
tctattccatatctgatatttctataaagagtcagataacacatgttagg
ttattataagtcacttaatatctgg
gaattcaactcactctataagtacctatacttctgcagaatatggtcatt
gttgtatgaaattgatataaaaatatagaatggctccatgaagtttctct
ttataagtaaaccaattcattccaaacaacagcttattctatacaaataa
gaatttctggtcagatatattgaactcaagaagttagaaaaaaaaataaa
aaataatgccaagaacttgctcagttaagtaaggacctaaactcctgcca
atgctttcactggtgcctccttacagttaattgggctgtcttgttctgaa
ttggtctgctaaggagacattcctttgatctttttgcagcaatctaattc
attctgacactgttaagagttctgacctctgacttaggccaaagtgtagg
ataatttaggtggagaaatagaatgtggaattggttgaggtggagagact
tgacttcagctcttcacaaatgcttagaaaattaggatcctaggacattg
ccagtgttagattcattataactgctctgtgattaagcacagtgtttaag
ctgagctcttactgttatgtaaagtgcctctggggcactgctaaattgca
gattttctatgcttttctctctgtgagatcctgaactcctatagataata
gcctttgaaaaagcttctgtatgtaaaatagattttatagcccatatttg
atgaaaagcacactcacaaaagtacttttttaaaaaaggtatccttcagt
gccagaaattttatataaggcatttaatctatgcccaagtactgacaaac
aaaccaggataaaatagatgctgactgagtataatagtctagtaattggc
aacacactgctcatacaagtgtctgtgacagcagaaaggatcattttatg
ctctaaccatgcactgagatgcctgctgtacacgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113293655_113294864
seq2: B6Ng01-133A14.b_46_1220

seq1  GAATTCTTTTAAAAAATATACTTGGCTGTAAATTATCTGTAGCCAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAAAAAATATACTTGGCTGTAAATTATCTGTAGCCAAAATT  50

seq1  TACAGTAGCTAGGGTAACAAGGTTTTCTGTGCTCAGTAGATCGCCCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAGCTAGGGTAACAAGGTTTTCTGTGCTCAGTAGATCGCCCATAT  100

seq1  GTTAATATATGCATTCAAATAATTATTACTAAGCTTTACAGTTTCTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATATATGCATTCAAATAATTATTACTAAGCTTTACAGTTTCTCTTT  150

seq1  TAAACATGAGACAGAAAAACTGTTTATATTATCAACTGATATATAATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATGAGACAGAAAAACTGTTTATATTATCAACTGATATATAATGAG  200

seq1  ATGCTGAAGTCAATCTAAACCTGATCCTTCACTTGCTGCTGTGATTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAAGTCAATCTAAACCTGATCCTTCACTTGCTGCTGTGATTCAGT  250

seq1  TTCTGCATTTGGCACCATCAGAACAGCATGCAATACGATAACGTCTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATTTGGCACCATCAGAACAGCATGCAATACGATAACGTCTCTGC  300

seq1  ATACAGAAATCTACAGAGACAGCTTCACTTCTTACTGATATCTAAGTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAAATCTACAGAGACAGCTTCACTTCTTACTGATATCTAAGTTCA  350

seq1  CACACCAATTCACAAAGTGTGTGTTTGATTCCTTTACCTTATGACAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAATTCACAAAGTGTGTGTTTGATTCCTTTACCTTATGACAGATA  400

seq1  GCTGCTCTGCCTGGCTCTTATTGTCATGGTTCAGATTTCTTCTAAAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCTGCCTGGCTCTTATTGTCATGGTTCAGATTTCTTCTAAAAAGA  450

seq1  ACAGCTGGGACAAGGAAAAGGAATGTGTTTACTGAAGAGTGTGTACGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGGGACAAGGAAAAGGAATGTGTTTACTGAAGAGTGTGTACGATG  500

seq1  AGCCTCTGTTTTATTTGAAGCCATTTCTCTGTAGAATGTATAAGGGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGTTTTATTTGAAGCCATTTCTCTGTAGAATGTATAAGGGTAAA  550

seq1  GTAGATAAAACTCAGTCTGGAGACGCAATACTAAAACAGGCACCACTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATAAAACTCAGTCTGGAGACGCAATACTAAAACAGGCACCACTCAA  600

seq1  TTGAATTAGCCGACAGTAATCAATACATTTTTTCTTCCTTGTTTTATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTAGCCGACAGTAATCAATACATTTTTTCTTCCTTGTTTTATAAG  650

seq1  GCATATAATTATATATTTTGTCTTATTATATTATAATCTTCCTCTGTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATAATTATATATTTTGTCTTATTATATTATAATCTTCCTCTGTAGT  700

seq1  TATTATTAATTATTATTATTCCTTTTAAGATTGCCAAAATAAATAAGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTAATTATTATTATTCCTTTTAAGATTGCCAAAATAAATAAGTGC  750

seq1  ACATATAAATTATTAAAAGCATAGTTATGTTTACTCATTGTATACTTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAATTATTAAAAGCATAGTTATGTTTACTCATTGTATACTTCAT  800

seq1  GTGAAAGAAATTTTATTTTTTGAAGTAAGCTATTCTGTCCTATTATAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGAAATTTTATTTTTTGAAGTAAGCTATTCTGTCCTATTATAAAA  850

seq1  GAAAATATTTGGTGAGTTAAATACATTCAAATGCCTTTATTTCCTAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAAAATATTTGGTGAGTTAAATACATTCAAATGCCTTTATTTCCT-AAAT  899

seq1  ACCAAATATTGTGTTACTAACATTAAAAAAAAACGGAATTTGCTTCAAAA  950
      |||||||||||||||||||||||| ||||||||||||||||||||| |||
seq2  ACCAAATATTGTGTTACTAACATT-AAAAAAAACGGAATTTGCTTC-AAA  947

seq1  ATAATTGAAATAGAATATAAAATTAAATTATTGAAATAACATACTAAATA  1000
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  ATAATTGAAATAGAATATAAAATTAAATTATTGAA--TACATACTAAATA  995

seq1  TCTTATGGATAATGAAACACTAAGGAAGAACAACTTTATAAAAATCAAAG  1050
      || |||||| |||| |||||||  | |||   ||||||| |||||| |||
seq2  TC-TATGGA-AATG-AACACTA--GGAGA--CACTTTAT-AAAATC-AAG  1036

seq1  ACTTTTGATTAAAGACAGTCATAGGCTTAATATTATATATTTATTATTTG  1100
      || ||||||| |||||||||||| |||  || || |||||||||||||  
seq2  AC-TTTGATT-AAGACAGTCATA-GCT--AT-TTTTATATTTATTATT--  1078

seq1  AAAACTATAAAAATATAATAGAAAATTCTATTCACATATCTGAATTAATG  1150
        |||||||||||| |||||||||  ||||||| |||||||||    || 
seq2  -GAACTATAAAAAT-TAATAGAAA--TCTATTC-CATATCTGA---TATT  1120

seq1  TCTAT-AAGAGTCAGGATAACCACATGTTA-GTTATTATAAAGGTACAAA  1198
      ||||| |||||||| ||||| ||||||||| ||||||||||  ||    |
seq2  TCTATAAAGAGTCA-GATAA-CACATGTTAGGTTATTATAA--GT---CA  1163

seq1  TTTAATATCTGG  1210
       |||||||||||
seq2  CTTAATATCTGG  1175

seq1: chr14_113411668_113412613
seq2: B6Ng01-133A14.g_67_1003 (reverse)

seq1  AATCGTGTAGCAGCCAGGCATCTCAGTGCATGGTTAGAGCACTAAAAATG  50
      ||||||||| ||| |||||||||||||||||||||||||||   ||||||
seq2  AATCGTGTA-CAG-CAGGCATCTCAGTGCATGGTTAGAGCA--TAAAATG  46

seq1  TATCCTTTCTGCTGTCACAGACACTTGCTATGAGCAGTGTTGTTGCCAAT  100
       |||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  -ATCCTTTCTGCTGTCACAGACACTTG-TATGAGCAGTG-TGTTGCCAAT  93

seq1  TACTAGACTTATTATACTCAGTCAGCATCTATTTTTATCCTGGTTTGTTT  150
      |||||||| |||||||||||||||||||||| ||||||||||||||| ||
seq2  TACTAGAC-TATTATACTCAGTCAGCATCTA-TTTTATCCTGGTTTG-TT  140

seq1  TGTCAGTACTTGGGCATAGATTAAATGCCTTATATAAAATTTCTGGCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTACTTGGGCATAGATTAAATGCCTTATATAAAATTTCTGGCACT  190

seq1  GAAGGATACCTTTTTT-AAAAAGTACTTTTGTGAGTGTGCTTTTCATCAA  249
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAAGGATACCTTTTTTAAAAAAGTACTTTTGTGAGTGTGCTTTTCATCAA  240

seq1  ATATGGGCTATAAAATCTATTTTACATACAGAAGCTTTTTCAAAGGCTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGGCTATAAAATCTATTTTACATACAGAAGCTTTTTCAAAGGCTAT  290

seq1  TATCTATAGGAGTTCAGGATCTCACAGAGAGAAAAGCATAGAAAATCTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATAGGAGTTCAGGATCTCACAGAGAGAAAAGCATAGAAAATCTGC  340

seq1  AATTTAGCAGTGCCCCAGAGGCACTTTACATAACAGTAAGAGCTCAGCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGCAGTGCCCCAGAGGCACTTTACATAACAGTAAGAGCTCAGCTT  390

seq1  AAACACTGTGCTTAATCACAGAGCAGTTATAATGAATCTAACACTGGCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGTGCTTAATCACAGAGCAGTTATAATGAATCTAACACTGGCAA  440

seq1  TGTCCTAGGATCCTAATTTTCTAAGCATTTGTGAAGAGCTGAAGTCAAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAGGATCCTAATTTTCTAAGCATTTGTGAAGAGCTGAAGTCAAGT  490

seq1  CTCTCCACCTCAACCAATTCCACATTCTATTTCTCCACCTAAATTATCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACCTCAACCAATTCCACATTCTATTTCTCCACCTAAATTATCCT  540

seq1  ACACTTTGGCCTAAGTCAGAGGTCAGAACTCTTAACAGTGTCAGAATGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTGGCCTAAGTCAGAGGTCAGAACTCTTAACAGTGTCAGAATGAA  590

seq1  TTAGATTGCTGCAAAAAGATCAAAGGAATGTCTCCTTAGCAGACCAATTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTGCTGCAAAAAGATCAAAGGAATGTCTCCTTAGCAGACCAATTC  640

seq1  AGAACAAGACAGCCCAATTAACTGTAAGGAGGCACCAGTGAAAGCATTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGACAGCCCAATTAACTGTAAGGAGGCACCAGTGAAAGCATTGG  690

seq1  CAGGAGTTTAGGTCCTTACTTAACTGAGCAAGTTCTTGGCATTATTTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTTTAGGTCCTTACTTAACTGAGCAAGTTCTTGGCATTATTTTTT  740

seq1  ATTTTTTTTTCTAACTTCTTGAGTTCAATATATCTGACCAGAAATTCTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTCTAACTTCTTGAGTTCAATATATCTGACCAGAAATTCTTA  790

seq1  TTTGTATAGAATAAGCTGTTGTTTGGAATGAATTGGTTTACTTATAAAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAGAATAAGCTGTTGTTTGGAATGAATTGGTTTACTTATAAAGA  840

seq1  GAAACTTCATGGAGCCATTCTATATTTTTATATCAATTTCATACAACAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTCATGGAGCCATTCTATATTTTTATATCAATTTCATACAACAAT  890

seq1  GACCATATTCTGCAGAAGTATAGGTACTTATAGAGTGAGTTGAATTC  946
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATATTCTGCAGAAGTATAGGTACTTATAGAGTGAGTTGAATTC  937