BAC Information

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BAC

Clone NameB6Ng01-133O22
Chromosome14 (Build37)
Map Location 70,204,337 - 70,313,744
singlet/doubletdoublet
Overlap geneRhobtb2, LOC100043701, 1700081D17Rik
Upstream geneAdam28, LOC641033, LOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b
Downstream geneLOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133O22.bB6Ng01-133O22.g
ACCDH934355DH934356
length7931,080
definitionDH934355|Mus musculus domesticus DNA, BAC clone: B6Ng01-133O22, 5' end.DH934356|Mus musculus domesticus DNA, BAC clone: B6Ng01-133O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,204,337 - 70,205,185)(70,312,651 - 70,313,744)
sequence
gaattccaccagtagtttgccaaaactcagctggacagaccacagtggag
ttgacttcaaagaatcagctagctccactgccggcagcaaacaccgcaat
tgtactgttttttgtttttgtttttgtttttttaaagaaagaaagaaaag
aaaggaaagtaaaagaaaaaggaaaaaggtacacctctaccactctgaac
ctcttatttccctcctgacatgccgctctgcacacacaatttttttttaa
tgaaataaatagggaagggggaggggcacgacacaccgatgcaaaacatg
tagttctcccctaaaaacacccaagaaaggttagtttctcttccctctga
actgtgcagactcagcaagtgcccaagggaagagtggagctcaggggaag
gcaggagggacgcagggaggagaggggagggtgctgaaggatgagccaag
gcgaggtggcacgtttgcttgcaacccggccataatagaaatcaatcgtg
tacttacaccactacatgtgacggggtaatttctagtgtagggaacacat
ctcttcctgctaagcacgctcattttagtgagatgtctggggtcactctg
cgcgtgcaagttggggcgccgccgacgctgctgctctgtgctggagaccc
agactcctggggtcccggttcaggtacgatcagaagaaaactctggcaca
ggagccctggtcggaccgcggcacgttgagcagcctggggcgctgcactt
gcagccactgcctcttccggatcagcatctccgcgcgatccgg
gaattctcacaatatttgaccctggacagatgacgagagaaaactatcca
caggacaagaaggcctgaaatctccaggcaggatgctgccgtcgtgactg
gaaaaacaaagaggatcatcactcggcacccctgacatccggaaatggag
ctgtggcatggaggtgccctgtgtccttgtgcccttctttctgggcattt
taaggagctgacacccaagtctgctgtctgtacagccttcttcaataagg
atctatactgagtactcaaagaacagctctgaatttggggtttgcaggta
gggaccctgataaccagtaaggttatttcctggcaagctgcatttccaca
tccacagaataggccatgaaggccggccagggtgccctgctagcttcctt
tccaaacttgtgatccatcctaccatcccactcggcacccctctgctctc
agtgcagggaggatttcctatccctttgtttatgctcctctgatcaaacc
accattcattcaacaagcattcagaaactcacaagacgtgcctggcctct
ggttgccatggcagagccggaaggcaggcggggcacctacctccctggaa
ctccaaggcatccagctcagaaaggaaaggcaattccttccacctgtgtg
aggaggcctgcctgaggtcctagggaaatgcctgcctgatagcaggccac
agggtaaagggggctgtgccaccagcagccctggctaagtgactgtcaga
gagagggttctcgaaacacttgtcttctctgtggcttctctccgggatgc
ctgccctgcgtagttatcatctgcctacattactgcaggagcctcttaac
ctaccaataacatcctcctgacagccaccaccatgattatcaaacccact
tcagctagcccatgccagcccacccaggctgatgtccttgcccctcatct
cacacaaagcacatttcagcagcagcgactcttttgtgtagactgacttg
tgccctctgcctctgctctgcttacacttttctctcaagacagctggact
cggtgggcggctccattctcctccagaagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_70204337_70205185
seq2: B6Ng01-133O22.b_47_839

seq1  GAATTCCACCAGTAGTTTGCCAAAACTCAGCTGGACAGACCACAGTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCAGTAGTTTGCCAAAACTCAGCTGGACAGACCACAGTGGAG  50

seq1  TTGACTTCAAAGAATCAGCTAGCTCCACTGCCGGCAGCAAACACCGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTCAAAGAATCAGCTAGCTCCACTGCCGGCAGCAAACACCGCAAT  100

seq1  TGTACTGTTTTTTGTTTTTGTTTTTGTTTTTTTAAAGAAAGAAAGAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGTTTTTTGTTTTTGTTTTTGTTTTTTTAAAGAAAGAAAGAAAAG  150

seq1  AAAGGAAAGTAAAAGAAAAAGGAAAAAGGTACACCTCTACCACTCTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGTAAAAGAAAAAGGAAAAAGGTACACCTCTACCACTCTGAAC  200

seq1  CTCTTATTTCCCTCCTGACATGCCGCTCTGCACACACAATTTTTTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATTTCCCTCCTGACATGCCGCTCTGCACACACAATTTTTTTTTAA  250

seq1  TGAAATAAATAGGGAAGGGGGAGGGGCACGACACACCGATGCAAAACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAAATAGGGAAGGGGGAGGGGCACGACACACCGATGCAAAACATG  300

seq1  TAGTTCTCCCCTAAAAACACCCAAGAAAGGTTAGTTTCTCTTCCCTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTCCCCTAAAAACACCCAAGAAAGGTTAGTTTCTCTTCCCTCTGA  350

seq1  ACTGTGCAGACTCAGCAAGTGCCCAAGGGAAGAGTGGAGCTCAGGGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCAGACTCAGCAAGTGCCCAAGGGAAGAGTGGAGCTCAGGGGAAG  400

seq1  GCAGGAGGGACGCAGGGAGGAGAGGGGAGGGTGCTGAAGGATGAGCCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGGGACGCAGGGAGGAGAGGGGAGGGTGCTGAAGGATGAGCCAAG  450

seq1  GCGAGGTGGCACGTTTGCTTGCAACCCGGCCATAATAGAAATCAATCGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGTGGCACGTTTGCTTGCAACCCGGCCATAATAGAAATCAATCGTG  500

seq1  TACTTACACCACTACATGTGACGGGGTAATTTCTAGTGTAGGGAACACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACACCACTACATGTGACGGGGTAATTTCTAGTGTAGGGAACACAT  550

seq1  CTCTTCCTGCTAAGCACGCTCATTTTAGTGAGATGTCTGGGGTCACTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTGCTAAGCACGCTCATTTTAGTGAGATGTCTGGGGTCACTCTG  600

seq1  CGCGTGCAAGTTGGGGCGCCGCCGACGCTGCTGCTCTGTGCTGGAGACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTGCAAGTTGGGGCGCCGCCGACGCTGCTGCTCTGTGCTGGAGACCC  650

seq1  AGACTCCTGGGGTCCCGGTTCAGGTACGATCAGAAG-AAACTCTGGCACA  699
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGACTCCTGGGGTCCCGGTTCAGGTACGATCAGAAGAAAACTCTGGCACA  700

seq1  GGAGCCCTGGTCGGACCGCGGCACG-TGAGCAGCCTGGGGCGCTGCAC-T  747
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  GGAGCCCTGGTCGGACCGCGGCACGTTGAGCAGCCTGGGGCGCTGCACTT  750

seq1  GCAGCCACTGCCTCTTCCGGATCAGCATCTCCGCGCGACCCGGGCGCCCA  797
      |||||||||||||||||||||||||||||||||||||| ||||       
seq2  GCAGCCACTGCCTCTTCCGGATCAGCATCTCCGCGCGATCCGG-------  793

seq1  ATGTCATGGAGGCTCGCGGAGCCGGGTTGCGCGCCGCCGCTCCGACCTCC  847
                                                        
seq2  --------------------------------------------------  793

seq1  GG  849
        
seq2  --  793

seq1: chr14_70312651_70313744
seq2: B6Ng01-133O22.g_66_1145 (reverse)

seq1  GCTTCCTGGAGGAGATGAGGCCCGCCCACCCGAGTCCAGGCTGTCTTTGA  50
      |||| ||||||||||   |  ||||||| ||||||||| |||||| ||||
seq2  GCTT-CTGGAGGAGAATGGAGCCGCCCA-CCGAGTCCA-GCTGTC-TTGA  46

seq1  GAGGAAGAGTGTTAAGCAGGAGGCAGAGGCAGAGGGCACGAGGTCAGTCC  100
      || ||| |||| |||||||   ||||||||||||||||| | ||||||| 
seq2  GA-GAAAAGTG-TAAGCAG--AGCAGAGGCAGAGGGCAC-AAGTCAGTC-  90

seq1  TTACACAAAAGGAGTCGCTGCTGCTGAAAATGTGCTTTGTGTGGAGATGG  150
       ||||||||| ||||||||||||||| ||||||||||||||| |||||| 
seq2  -TACACAAAA-GAGTCGCTGCTGCTG-AAATGTGCTTTGTGT-GAGATGA  136

seq1  GGGGCAAGGACATCAGCCTGGGTGGGCTGGCATGGGCTAGCTGAAGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAAGGACATCAGCCTGGGTGGGCTGGCATGGGCTAGCTGAAGTGGG  186

seq1  TTTGATAATCATGGTGGTGGCTGTCAGGAGGATGTTATTGGTAGGTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAATCATGGTGGTGGCTGTCAGGAGGATGTTATTGGTAGGTTAAG  236

seq1  AGGCTCCTGCAGTAATGTAGGCAGATGATAACTACGCAGGGCAGGCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCTGCAGTAATGTAGGCAGATGATAACTACGCAGGGCAGGCATCC  286

seq1  CGGAGAGAAGCCACAGAGAAGACAAGTGTTTCGAGAACCCTCTCTCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGAGAAGCCACAGAGAAGACAAGTGTTTCGAGAACCCTCTCTCTGAC  336

seq1  AGTCACTTAGCCAGGGCTGCTGGTGGCACAGCCCCCTTTACCCTGTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTAGCCAGGGCTGCTGGTGGCACAGCCCCCTTTACCCTGTGGCC  386

seq1  TGCTATCAGGCAGGCATTTCCCTAGGACCTCAGGCAGGCCTCCTCACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCAGGCAGGCATTTCCCTAGGACCTCAGGCAGGCCTCCTCACACA  436

seq1  GGTGGAAGGAATTGCCTTTCCTTTCTGAGCTGGATGCCTTGGAGTTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAAGGAATTGCCTTTCCTTTCTGAGCTGGATGCCTTGGAGTTCCAG  486

seq1  GGAGGTAGGTGCCCCGCCTGCCTTCCGGCTCTGCCATGGCAACCAGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTAGGTGCCCCGCCTGCCTTCCGGCTCTGCCATGGCAACCAGAGGC  536

seq1  CAGGCACGTCTTGTGAGTTTCTGAATGCTTGTTGAATGAATGGTGGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACGTCTTGTGAGTTTCTGAATGCTTGTTGAATGAATGGTGGTTTG  586

seq1  ATCAGAGGAGCATAAACAAAGGGATAGGAAATCCTCCCTGCACTGAGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGGAGCATAAACAAAGGGATAGGAAATCCTCCCTGCACTGAGAGC  636

seq1  AGAGGGGTGCCGAGTGGGATGGTAGGATGGATCACAAGTTTGGAAAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGTGCCGAGTGGGATGGTAGGATGGATCACAAGTTTGGAAAGGAA  686

seq1  GCTAGCAGGGCACCCTGGCCGGCCTTCATGGCCTATTCTGTGGATGTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCAGGGCACCCTGGCCGGCCTTCATGGCCTATTCTGTGGATGTGGA  736

seq1  AATGCAGCTTGCCAGGAAATAACCTTACTGGTTATCAGGGTCCCTACCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGCTTGCCAGGAAATAACCTTACTGGTTATCAGGGTCCCTACCTG  786

seq1  CAAACCCCAAATTCAGAGCTGTTCTTTGAGTACTCAGTATAGATCCTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCCAAATTCAGAGCTGTTCTTTGAGTACTCAGTATAGATCCTTAT  836

seq1  TGAAGAAGGCTGTACAGACAGCAGACTTGGGTGTCAGCTCCTTAAAATGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGGCTGTACAGACAGCAGACTTGGGTGTCAGCTCCTTAAAATGC  886

seq1  CCAGAAAGAAGGGCACAAGGACACAGGGCACCTCCATGCCACAGCTCCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGAAGGGCACAAGGACACAGGGCACCTCCATGCCACAGCTCCAT  936

seq1  TTCCGGATGTCAGGGGTGCCGAGTGATGATCCTCTTTGTTTTTCCAGTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGGATGTCAGGGGTGCCGAGTGATGATCCTCTTTGTTTTTCCAGTCA  986

seq1  CGACGGCAGCATCCTGCCTGGAGATTTCAGGCCTTCTTGTCCTGTGGATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACGGCAGCATCCTGCCTGGAGATTTCAGGCCTTCTTGTCCTGTGGATA  1036

seq1  GTTTTCTCTCGTCATCTGTCCAGGGTCAAATATTGTGAGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTCTCGTCATCTGTCCAGGGTCAAATATTGTGAGAATTC  1080