BAC Information

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BAC

Clone NameB6Ng01-134D19
Chromosome14 (Build37)
Map Location 67,178,506 - 67,179,700
singlet/doubletsinglet
Overlap genenone
Upstream geneElp3, Gm600, Scara5, Pbk, Esco2, Ccdc25, Scara3, Clu, Gulo, Adam2, LOC100043675, Ephx2, Chrna2, Ptk2b, LOC100043676, Trim35, Stmn4
Downstream geneAdra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a, Ebf2, EG628416, LOC100043046
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134D19.bB6Ng01-134D19.g
ACCDH934586DH934587
length1,2211,187
definitionDH934586|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D19, 5' end.DH934587|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacccccgtttcctgacaaagatagtctaggtgtcgttttcctc
tggagcttccatatgactgcctataaagctaggaggaggatttagtaact
tgcaagaatggctcccagaattcagaagcccactctagttaataccattt
gtttattatacatgctatgatttggaaacagggaagtaaagaggtttgtg
aatacagcagggtgcatcagtcctatgtctgcccaacaagaccctctagc
atccactgtcatctataacattgatggagcatccatgagagaggtgatgt
tgactaaacacttgccggtatttcatatttagccttcagtggttaatttc
ctgtagatgggttttgagggaggctgtaactaggccttttaggagcagac
tcttagccgaattattggccattaatcaaggaacagagcataaaatgaag
gtttcacccaatgtcttgtgtggtcatacaaaattcttaaacactgaata
aaagtataaacaaaacaggtttatgtgactcacctctctgtagacagaag
gttaaagagagcaaagtgctggtgtcgtggtgagggcctttggtttcatg
aaaacccagctgtgaagcagaaacaggctgtacagaagagaaacatctgc
aaagccaggcgaagagtgagaagggaaccaggcttctttcaaaacaactc
attctcctgggtcctaatccacttctagatcttacatgctagcgtcaacc
tcaccagtaaagtaagccccctccccctcacgacccagtttccttccacc
agatcccacttcttaacaagctcactgtctcaacactagggaccaagttc
tctgagcatgaacctttggaggacaagccataccaaccatagtctctatt
gctgtagaaaatctcaccgaacttatcccatatctagtctcgcttctaag
ttctcttcataaaatttatttttttacacaatgaagtatagtttaaattg
acggctgtcatcctcttatcttgcagtgctgtaaaggactactcaagcct
ggggaatttataacactagaattttgttttggctcctgactcctggaggg
ttgaaggcgctctaaaagcgaatcatatgtggtttgtccaagcacccttt
ctcttgtcttggtgttcaatgttgcatggtaagaagagaagggggcacca
tccaaaaggaactgtctttta
gaattcagttatccccaggaaaaatttcaccaaattgtgctgtgcttaaa
taaaatactcagagtcagatctgaaagtttgaaccaacactggctactta
ggcatgttgagcccaagtactttctttcctctcgtgaatcctgactctgc
tggccatggtggttgtggggagcctggcagcatacaggtatagtgcaggg
atagcagagagttctcagtctcaaaacatatgtagcaaggagtgaaagtg
agggagatggagagagagagagacagagagacagagacacagagacacac
agagagacagagggagagagacagacagtcagagggagccagagagagag
agagagagagagagagagagagagagagagagagagagagatatttggga
atgacacatgggtttgaaacatcaaagcccgtcccccgttgtacagttcc
tctagcaggtcacaactcctaacttccaagcctcaccagacagcatcacc
aattggagaccaggtgtccgagagtcaggatggctgggtggggtgtggaa
catctcatccaaaccaccacatagtatgattgtgtattaggctgtctgca
gactagttttgtagacctcattttccctatgagatgagagccttgtactg
ttggaaaagtgagcttaacatatgaaatctgggggacacagcagcaatgg
cttagtggatagagcacctgctatgcagacatgcagacctgagttcagat
gctcagccttcctataaatgctggcatggtgatgcacacccacagtctca
gaactaggggatcgagataggcagggcctggagctccaggatcactgagg
gattgttgaaaaattaaaacggaaagaggaagatacccagtgtccgcctg
tagcctcttcatgggcccatgggtgcagctttgaatatccttacacgcac
accacacacacgcacacacacacacacacacacacacacagagtttatgg
tccctctcctcccactaaacaaactcatgaaatttcccatgacaagggag
cctatttaatatgggaatgcaccgaattcatttattctttgcctggtaat
ggataggttctacctgggttatacacatataaggttaaataaatgtaaaa
tgtctctcacttgtgaaggtctaggcacatccctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_67178506_67179700
seq2: B6Ng01-134D19.b_42_1262

seq1  GAATTCTACCCCCGTTTCCTGACAAAGATAGTCTAGGTGTCGTTTTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCCCCGTTTCCTGACAAAGATAGTCTAGGTGTCGTTTTCCTC  50

seq1  TGGAGCTTCCATATGACTGCCTATAAAGCTAGGAGGAGGATTTAGTAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTTCCATATGACTGCCTATAAAGCTAGGAGGAGGATTTAGTAACT  100

seq1  TGCAAGAATGGCTCCCAGAATTCAGAAGCCCACTCTAGTTAATACCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAATGGCTCCCAGAATTCAGAAGCCCACTCTAGTTAATACCATTT  150

seq1  GTTTATTATACATGCTATGATTTGGAAACAGGGAAGTAAAGAGGTTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTATACATGCTATGATTTGGAAACAGGGAAGTAAAGAGGTTTGTG  200

seq1  AATACAGCAGGGTGCATCAGTCCTATGTCTGCCCAACAAGACCCTCTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGCAGGGTGCATCAGTCCTATGTCTGCCCAACAAGACCCTCTAGC  250

seq1  ATCCACTGTCATCTATAACATTGATGGAGCATCCATGAGAGAGGTGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTGTCATCTATAACATTGATGGAGCATCCATGAGAGAGGTGATGT  300

seq1  TGACTAAACACTTGCCGGTATTTCATATTTAGCCTTCAGTGGTTAATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAACACTTGCCGGTATTTCATATTTAGCCTTCAGTGGTTAATTTC  350

seq1  CTGTAGATGGGTTTTGAGGGAGGCTGTAACTAGGCCTTTTAGGAGCAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGATGGGTTTTGAGGGAGGCTGTAACTAGGCCTTTTAGGAGCAGAC  400

seq1  TCTTAGCCGAATTATTGGCCATTAATCAAGGAACAGAGCATAAAATGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCCGAATTATTGGCCATTAATCAAGGAACAGAGCATAAAATGAAG  450

seq1  GTTTCACCCAATGTCTTGTGTGGTCATACAAAATTCTTAAACACTGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACCCAATGTCTTGTGTGGTCATACAAAATTCTTAAACACTGAATA  500

seq1  AAAGTATAAACAAAACAGGTTTATGTGACTCACCTCTCTGTAGACAGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATAAACAAAACAGGTTTATGTGACTCACCTCTCTGTAGACAGAAG  550

seq1  GTTAAAGAGAGCAAAGTGCTGGTGTCGTGGTGAGGGCCTTTGGTTTCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGAGAGCAAAGTGCTGGTGTCGTGGTGAGGGCCTTTGGTTTCATG  600

seq1  AAAACCCAGCTGTGAAGCAGAAACAGGCTGTACAGAAGAGAAACATCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCAGCTGTGAAGCAGAAACAGGCTGTACAGAAGAGAAACATCTGC  650

seq1  AAAGCCAGGCGAAGAGTGAGAAGGGAACCAGGCTTCTTTCAAAACAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGGCGAAGAGTGAGAAGGGAACCAGGCTTCTTTCAAAACAACTC  700

seq1  ATTCTCCTGGGTCCTAATCCACTTCTAGATCTTACATGCTAGCGTCAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTGGGTCCTAATCCACTTCTAGATCTTACATGCTAGCGTCAACC  750

seq1  TCACCAGTAAAGTAAGCCCCCTCCCCCTCACGACCCAGTTTCCTTCCACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGTAAAGTAAGCCCCCTCCCCCTCACGACCCAGTTTCCTTCCACC  800

seq1  AGATCCCACTTCTTAACAAGCTCACTGTCTCAACACTAGGGACCAAGTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCACTTCTTAACAAGCTCACTGTCTCAACACTAGGGACCAAGTTC  850

seq1  TCTGAGCATGAACCTTTGGAGGACAAGCCATACCAACCATAGTCTCTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCATGAACCTTTGGAGGACAAGCCATACCAACCATAGTCTCTATT  900

seq1  GCTGTAGAAAATCTCACCGAACTTATCCAATATCTAGTCTCGCTTCTAAG  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCTGTAGAAAATCTCACCGAACTTATCCCATATCTAGTCTCGCTTCTAAG  950

seq1  TTCCTCTTCATAAAATTTATTTTTTTAACACAATGAAGTATAGTTTACAT  1000
      || ||||||||||||||||||||||| |||||||||||||||||||| ||
seq2  TT-CTCTTCATAAAATTTATTTTTTT-ACACAATGAAGTATAGTTTAAAT  998

seq1  TGACGGCTGTCATCCTC-TATCTTGCAGTGCTGTAAAGGACTACTCAAGC  1049
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGACGGCTGTCATCCTCTTATCTTGCAGTGCTGTAAAGGACTACTCAAGC  1048

seq1  CTGGGGAATTTAT-ACACTAGAATCT--GTTTGGCTCCTGACT-CTGGA-  1094
      ||||||||||||| |||||||||| |   |||||||||||||| ||||| 
seq2  CTGGGGAATTTATAACACTAGAATTTTGTTTTGGCTCCTGACTCCTGGAG  1098

seq1  GGTTG-AGGCG-TCTAAAAGCG-ATC--ATGGTGTTTG-CCAAGCACC--  1136
      ||||| ||||| |||||||||| |||  |||  ||||| |||||||||  
seq2  GGTTGAAGGCGCTCTAAAAGCGAATCATATGTGGTTTGTCCAAGCACCCT  1148

seq1  -------TTCTTGCTGTGTCATGGTGGATGGAAGGAGGA----GGGGCAC  1175
              ||||| |||   ||| || |||| | || ||    |||||||
seq2  TTCTCTTGTCTTGGTGTTCAATGTTGCATGGTAAGAAGAGAAGGGGGCAC  1198

seq1  --ACAAGAAGGAACTG-CTTTTA  1195
         | | ||||||||| ||||||
seq2  CATCCAAAAGGAACTGTCTTTTA  1221