BAC Information

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BAC

Clone NameB6Ng01-135B21
Chromosome14 (Build37)
Map Location 82,273,017 - 82,274,141
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639207
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135B21.bB6Ng01-135B21.g
ACCDH935240DH935241
length1,2541,121
definitionDH935240|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B21, 5' end.DH935241|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattcccagcaaccacatggtggctcacaaccatctgcaatggg
atctgatgccttctcttggtgtgtgtgaagagagcaacatatttactaat
atacataaaataaaataaatctttaaaaaaaggaaaagaacaacatattc
agtaataactattgtccttgcaaactcaaattggcctcataggagatatt
agtttactataaactctcctcataattccttctaggtgttactttttatt
agttgttatcattttttgtgaacaaagacactttgaaatggtagttgttt
acagtcaatagttttatggctttgtaaatatgcagtgtttcttattaact
tatttttcttattggcttaaagacctcttcacatacatatatatatatac
atacatatatatatatatatatatatatatatatagtaaaatttttatag
ctttttattgtttttattccaaatgaaatgtgtaaaaacaagggagtaat
gcttttattttcttttttgaattgaaaattcttctctcatatagcacatc
ctgaccatggtttcccctccctctatttcagccagctacctctgtacctc
ccttcttctccacaatctactctccttatatcccttcaagaagtagcagg
cctcaaagagacaaccaaacacaacaaaataccggatacagtaaaacaag
gccaaagccctcatattgaggctggacaccgcaacccataaggggaagga
atctatgagcaggcaaaagagtcaaagacttaactgctttccctgttatg
agtcccataaaatcactatgataaaagcataacatatatgcagaagacct
aggatagatccttgtagtccctgtgcttgaaattcagtgtctatgaatcc
acatgatcactgcttaattgatttagtgggccatggtctcctggtatctt
attcctcctgactcctacaacttttctctcacagttctgccacatttcca
aaggaacaagtgaaggacctgatgagactgtcaattatactcttctctca
gatgctgtctggctgtaggtctctggaacatgtttccttctgtaaactga
caaatcaatttcttgtggagaacctatataaggaacaatctatggaaata
ggattccattaaaaggatatgttaatcaactatcaataccatcaacgact
acatcacaagttctagggtatattattggcaacctggttggcctcacacc
tagg
gaattctcatgaaattaatttacattaaaccccacaattctggaggcttg
aaaatccaagggcagaatattgtctttgttctctgatgagatacctgaag
cttttcagataattttgggattcagaaatgccaatgattggtcataagga
gaagagaaaagagacacacaaggagaaatcctgtagtaaccaacatccat
actacaaacttaaacctcattatgaatttgggtaggcagaaactatactg
ccatcaaaagtcttcccgagctttctttcacaaaaatgatcactttttct
tagggtgttttcacagcaataagacttcacttcactttttctcatgttgg
tatagccatgagcaatccacaaagaactcatccatataaatctaacatag
tgacttgtagaaaatagaatataaatggccatatcaaaagctttattttt
aatatggccactcatgctttgtcatttatcattcaattttctgatgcagt
ggtaactttataaacatgtttatctttttacataccctgacacccatgaa
ttcaatatggatttctataactctgaggcttaaaaatgtatgggctctgt
gtacttttaaccctccaggttgtagaaatgttccactgagctaaaagctt
taatttatcccaagagcttgattttgaaagaaaattttctcagtttcaaa
atgtttctgaaacagcttgtacactgactagtgaaaggaatagcaaggcc
aagcaggccattctccagtggctctctacaaatatgtgatgccacaattg
gggtcacagaccttcatctttgctctcatagtttttattgccctggtgtg
ttttgatgcactccaaagggaactgtcatcttatctcctttattccgcat
tttagaaacgagatttgcagaggatgctaaagaaagtaggcaagtagaat
ttccattttattcattctcaggctatttcctgcatatgaacataataagt
ccttattaataaattattcaatttgtaaaaacaggtaaccacaaaaataa
tatgtcataacgaatttatttaatttatttttatgacctcatctaaatta
tactcctgaaacaaatatagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_82273017_82274141
seq2: B6Ng01-135B21.g_67_1187

seq1  GAATTCTCATGAAATTAATTTACATTAAACCCCACAATTCTGGAGGCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGAAATTAATTTACATTAAACCCCACAATTCTGGAGGCTTG  50

seq1  AAAATCCAAGGGCAGAATATTGTCTTTGTTCTCTGATGAGATACCTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAAGGGCAGAATATTGTCTTTGTTCTCTGATGAGATACCTGAAG  100

seq1  CTTTTCAGATAATTTTGGGATTCAGAAATGCCAATGATTGGTCATAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGATAATTTTGGGATTCAGAAATGCCAATGATTGGTCATAAGGA  150

seq1  GAAGAGAAAAGAGACACACAAGGAGAAATCCTGTAGTAACCAACATCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAAAGAGACACACAAGGAGAAATCCTGTAGTAACCAACATCCAT  200

seq1  ACTACAAACTTAAACCTCATTATGAATTTGGGTAGGCAGAAACTATACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAACTTAAACCTCATTATGAATTTGGGTAGGCAGAAACTATACTG  250

seq1  CCATCAAAAGTCTTCCCGAGCTTTCTTTCACAAAAATGATCACTTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAAAAGTCTTCCCGAGCTTTCTTTCACAAAAATGATCACTTTTTCT  300

seq1  TAGGGTGTTTTCACAGCAATAAGACTTCACTTCACTTTTTCTCATGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTGTTTTCACAGCAATAAGACTTCACTTCACTTTTTCTCATGTTGG  350

seq1  TATAGCCATGAGCAATCCACAAAGAACTCATCCATATAAATCTAACATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCATGAGCAATCCACAAAGAACTCATCCATATAAATCTAACATAG  400

seq1  TGACTTGTAGAAAATAGAATATAAATGGCCATATCAAAAGCTTTATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGTAGAAAATAGAATATAAATGGCCATATCAAAAGCTTTATTTTT  450

seq1  AATATGGCCACTCATGCTTTGTCATTTATCATTCAATTTTCTGATGCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGCCACTCATGCTTTGTCATTTATCATTCAATTTTCTGATGCAGT  500

seq1  GGTAACTTTATAAACATGTTTATCTTTTTACATACCCTGACACCCATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACTTTATAAACATGTTTATCTTTTTACATACCCTGACACCCATGAA  550

seq1  TTCAATATGGATTTCTATAACTCTGAGGCTTAAAAATGTATGGGCTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATGGATTTCTATAACTCTGAGGCTTAAAAATGTATGGGCTCTGT  600

seq1  GTACTTTTAACCCTCCAGGTTGTAGAAATGTTCCACTGAGCTAAAAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTTAACCCTCCAGGTTGTAGAAATGTTCCACTGAGCTAAAAGCTT  650

seq1  TAATTTATCCCAAGAGCTTGATTTTGAAAGAAAATTTTCTCAGTTTCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATCCCAAGAGCTTGATTTTGAAAGAAAATTTTCTCAGTTTCAAA  700

seq1  ATGTTTCTGAAACAGCTTGTACACTGACTAGTGAAAGGAATAGCAAGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTGAAACAGCTTGTACACTGACTAGTGAAAGGAATAGCAAGGCC  750

seq1  AAGCAGGCCATTCTCCAGTGGCTCTCTACAAATATGTGATGCCACAATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGCCATTCTCCAGTGGCTCTCTACAAATATGTGATGCCACAATTG  800

seq1  GGGTCACAGACCTTCATCTTTGCTCTCATAGTTTTTATTGCCCTGGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACAGACCTTCATCTTTGCTCTCATAGTTTTTATTGCCCTGGTGTG  850

seq1  TTTTGATGCACTCCAAAGGGAACTGTCATCTTATCTCCTTTATTCCGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATGCACTCCAAAGGGAACTGTCATCTTATCTCCTTTATTCCGCAT  900

seq1  TTTAGAAACGAGATTTGCAGAGGATGCTAAAGAAAGTAAGGCAAGTAGAA  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTAGAAACGAGATTTGCAGAGGATGCTAAAGAAAGT-AGGCAAGTAGAA  949

seq1  TTTCCATTTTATTCATTCTCAGGCTATTTCCTGCATATGAACATATAAGG  1000
      |||||||||||||||||||||||||||||||||||||||||||||  | |
seq2  TTTCCATTTTATTCATTCTCAGGCTATTTCCTGCATATGAACATAATAAG  999

seq1  TCCTTATTAATAAATTATTC-ATTTGTAAAGACAGGTAAACACAAAAATA  1049
      |||||||||||||||||||| ||||||||| |||||||| ||||||||||
seq2  TCCTTATTAATAAATTATTCAATTTGTAAAAACAGGTAACCACAAAAATA  1049

seq1  ATTATGTCAATAACAGAATTTAATTTTAATTTA-TTTTATGACCTCATCT  1098
      | |||||| ||||| |||||||  ||||||||| ||||||||||||||||
seq2  A-TATGTC-ATAAC-GAATTTA--TTTAATTTATTTTTATGACCTCATCT  1094

seq1  AAATTAATACT-CTGAAACAAATATAGT  1125
      ||||| ||||| ||||||||||||||||
seq2  AAATT-ATACTCCTGAAACAAATATAGT  1121