BAC Information

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BAC

Clone NameB6Ng01-136P19
Chromosome14 (Build37)
Map Location 90,224,239 - 90,393,072
singlet/doubletdoublet
Overlap geneEG328451
Upstream genenone
Downstream geneLOC100043336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136P19.bB6Ng01-136P19.g
ACCDH936619DH936620
length1,1391,075
definitionDH936619|Mus musculus domesticus DNA, BAC clone: B6Ng01-136P19, 5' end.DH936620|Mus musculus domesticus DNA, BAC clone: B6Ng01-136P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,224,239 - 90,225,387)(90,391,992 - 90,393,072)
sequence
gaattcttccagtattcagcaaggggcagtgctagaataatatgtttaga
actcaaagcatcatctacatagtcatttaaattatgttaattacactatc
ataagcatttgtcaaacaataggaaaatgcctatgtaattaatgtctttc
ttgcatcaatttagtctttaattttttataatgaataacaaattttaaaa
catttgctcataatgccagctattcccttgagcttattacttgatgaaag
acaaccgatgccttcaattcattctccaaagacactaaatgttaaatcct
tcagagattcacctgctattatgaatttcttgtaccaacacagtctcatt
tataggaactattgtttgtgaaaatcctcatttgaaatttttataaatat
gaatatgtattcactgcatggtaatgcatccaacatattaaattgaaaat
gttggtaattgaaacccaagttgggcagaatataaacacaaagaattaaa
gaaatggtaaatgtcagcccaagccagtaatataattgcattatatatag
atttttataaaaaatttactcacaatttatttttaaaacagtttatatct
ttaaataaatatgatataattatttttaattgaattaactttagaaatgg
ggttgcctttgtattataatattcagactaaagaaataaatacattctat
taaagcaaaagacaaacagtaaagtgtttatctggaaatattttacatta
tttttaactgtatttagaaaatcgtattatgtcacccaatctataccagt
taataaatacatttttacataataacataatataaatataagttttatca
atttaaatatctaaaaggttcctaatattgtactcaaatacaaacactca
atggtttttctcatattttgaatgcttttattaaaaaaaaagctgatatt
ttccaattaatttataggtgattttcaaattgtctacataaatctgtgtc
tatttctatgtttctaaagacttatcagtgataaacatcacatttaattt
caaccaaaatgccagtagtaatgcagaacactgatgataaaaattccata
caaataatcagtatcgttcaatatatagaagtcaataat
gaattctctaggtatgcaccagcttgacttctttgtatttactgagttgt
aggattgttgtggatttcccctgaatgagaaagtccaatagatatttatg
gacagtcaaagtaatggactggaatgagagcataaaatatcaagagggaa
gaaagtgggaggctgttgtggaataaaatgaccatctgtagggttgtatg
gagtcctaactcagtagaatatgttatgtacatatatgaaaggcaatcta
agtatagtcaccaaataacagagccctcaatggccacctattgtcacaaa
atggagcatataatgccaagaattggttatatttggtcaaattaattcca
tggtaatactcaaacccaccgaggcaattggcaagattattagagactct
acaaacagatcataaagccccggtgctgaagacagcacctatttttgata
tttttattatcagttacttcacattattcatgaggttagagatgagttat
ggttttgataattgtgttaccattttaatgtatataatatcatactgaag
tcaacagtagaaggttatggtcatgatttctagagaaaaaaaggatatga
aggaacttcaaaaatatagttttgacaagagtaaaagttggttgcttatt
ttaaagttttaatataataagaatattttaaaaatattttttattattac
atattttcatcaattacatttccaatgctagcccaaaagtcccccatacc
ctcccccccacttccctacccacccacacccattttttcaccctggcatt
cccctgtactggggcatataaagtttgcaagtccaatgggcctctctttc
cagtgatggccgactaggccatcttttgatacatatgcagctagagtcaa
gagctccggggtactcttcataatgttaacattgaaggtagttaaatact
ttataagatttttctagatactagacaagaatatttaccagcttgctacc
tcaatgtcctgactaaaataatataatgtgactagtttttaattattaga
aaatgtatttactatgaaaattggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90224239_90225387
seq2: B6Ng01-136P19.b_45_1183

seq1  GAATTCTTCCAGTATTCAGCAAGGGGCAGTGCTAGAATAATATGTTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCAGTATTCAGCAAGGGGCAGTGCTAGAATAATATGTTTAGA  50

seq1  ACTCAAAGCATCATCTACATAGTCATTTAAATTATGTTAATTACACTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAGCATCATCTACATAGTCATTTAAATTATGTTAATTACACTATC  100

seq1  ATAAGCATTTGTCAAACAATAGGAAAATGCCTATGTAATTAATGTCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATTTGTCAAACAATAGGAAAATGCCTATGTAATTAATGTCTTTC  150

seq1  TTGCATCAATTTAGTCTTTAATTTTTTATAATGAATAACAAATTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATCAATTTAGTCTTTAATTTTTTATAATGAATAACAAATTTTAAAA  200

seq1  CATTTGCTCATAATGCCAGCTATTCCCTTGAGCTTATTACTTGATGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCTCATAATGCCAGCTATTCCCTTGAGCTTATTACTTGATGAAAG  250

seq1  ACAACCGATGCCTTCAATTCATTCTCCAAAGACACTAAATGTTAAATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCGATGCCTTCAATTCATTCTCCAAAGACACTAAATGTTAAATCCT  300

seq1  TCAGAGATTCACCTGCTATTATGAATTTCTTGTACCAACACAGTCTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATTCACCTGCTATTATGAATTTCTTGTACCAACACAGTCTCATT  350

seq1  TATAGGAACTATTGTTTGTGAAAATCCTCATTTGAAATTTTTATAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAACTATTGTTTGTGAAAATCCTCATTTGAAATTTTTATAAATAT  400

seq1  GAATATGTATTCACTGCATGGTAATGCATCCAACATATTAAATTGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGTATTCACTGCATGGTAATGCATCCAACATATTAAATTGAAAAT  450

seq1  GTTGGTAATTGAAACCCAAGTTGGGCAGAATATAAACACAAAGAATTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTAATTGAAACCCAAGTTGGGCAGAATATAAACACAAAGAATTAAA  500

seq1  GAAATGGTAAATGTCAGCCCAAGCCAGTAATATAATTGCATTATATATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGTAAATGTCAGCCCAAGCCAGTAATATAATTGCATTATATATAG  550

seq1  ATTTTTATAAAAAATTTACTCACAATTTATTTTTAAAACAGTTTATATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATAAAAAATTTACTCACAATTTATTTTTAAAACAGTTTATATCT  600

seq1  TTAAATAAATATGATATAATTATTTTTAATTGAATTAACTTTAGAAATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAAATATGATATAATTATTTTTAATTGAATTAACTTTAGAAATGG  650

seq1  GGTTGCCTTTGTATTATAATATTCAGACTAAAGAAATAAATACATTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCCTTTGTATTATAATATTCAGACTAAAGAAATAAATACATTCTAT  700

seq1  TAAAGCAAAAGACAAACAGTAAAGTGTTTATCTGGAAATATTTTACATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAAAGACAAACAGTAAAGTGTTTATCTGGAAATATTTTACATTA  750

seq1  TTTTTAACTGTATTTAGAAAATCGTATTATGTCACCCAATCTATACCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACTGTATTTAGAAAATCGTATTATGTCACCCAATCTATACCAGT  800

seq1  TAATAAATACATTTTTACATAATAACATAATATAAATATAAGTTTTATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATACATTTTTACATAATAACATAATATAAATATAAGTTTTATCA  850

seq1  ATTTAAATATCTAAAAGGTTCCTAATATTGTACTCAAATACAAACACTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATATCTAAAAGGTTCCTAATATTGTACTCAAATACAAACACTCA  900

seq1  ATGGTTTTTCTCATATTTTGAATGCTTTTATTAAAAAAAAAGCTGATATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTTCTCATATTTTGAATGCTTTTATTAAAAAAAAAGCTGATATT  950

seq1  TTCCAATTAATTTATAGGTGATTTTCAAATTGTCTACATAAATCTGTGTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTAATTTATAGGTGATTTTCAAATTGTCTACATAAATCTGTGTC  1000

seq1  TATTTCTTATTGTTTTCTAAAGACTTATCAGTGAT-AACATCACATCTAT  1049
      |||||| |||   |||||||||||||||||||||| |||||||||| || 
seq2  TATTTC-TAT--GTTTCTAAAGACTTATCAGTGATAAACATCACATTTAA  1047

seq1  TTTCAACCAAAAATGCCAGTTAGTAATGCAGAACACTGGATGATAAAAAT  1099
      |||||||| |||||||||| ||||||||||||||||| ||||||||||||
seq2  TTTCAACC-AAAATGCCAG-TAGTAATGCAGAACACT-GATGATAAAAAT  1094

seq1  ACCATACAAAATTAAAACCAGTTACCGTCCAATATATAGAAGTCAATAAT  1149
       ||||||||    | || ||| || ||| |||||||||||||||||||||
seq2  TCCATACAA----ATAATCAG-TATCGTTCAATATATAGAAGTCAATAAT  1139

seq1: chr14_90391992_90393072
seq2: B6Ng01-136P19.g_70_1144 (reverse)

seq1  ACCAATGTTTCATAGTAAATACAATTTTCTTAATATTTAAAAAACTAGTC  50
      |||||| ||||||||||||||| |||||| ||||| || |||||||||||
seq2  ACCAAT-TTTCATAGTAAATAC-ATTTTC-TAATAATT-AAAAACTAGTC  46

seq1  ACATTATATTATTTTAGTCA-GACATTGAGGTTAGCAAGCTGGTAATTAT  99
      |||||||||||||||||||| |||||||||| |||||||||||||| |||
seq2  ACATTATATTATTTTAGTCAGGACATTGAGG-TAGCAAGCTGGTAAATAT  95

seq1  TCTTGTCTAGTATCTAGAAAAATCTTATAAAGTAATTTAAGCTACCTTCA  149
      ||||||||||||||||||||||||||||||||| |||||| |||||||||
seq2  TCTTGTCTAGTATCTAGAAAAATCTTATAAAGT-ATTTAA-CTACCTTCA  143

seq1  ATGTTAACATTATGAAGAGTACCCCGGAGCTCTTGACTCTAGCTGCATAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAACATTATGAAGAGTACCCCGGAGCTCTTGACTCTAGCTGCATAT  193

seq1  GTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGG  243

seq1  ACTTGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGTGAAAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCAAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGTGAAAAAA  293

seq1  TGGGTGTGGGTGGGTAGGGAAGTGGGGGGGAGGGTATGGGGGACTTTTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGGGTGGGTAGGGAAGTGGGGGGGAGGGTATGGGGGACTTTTGG  343

seq1  GCTAGCATTGGAAATGTAATTGATGAAAATATGTAATAATAAAAAATATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCATTGGAAATGTAATTGATGAAAATATGTAATAATAAAAAATATT  393

seq1  TTTAAAATATTCTTATTATATTAAAACTTTAAAATAAGCAACCAACTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATATTCTTATTATATTAAAACTTTAAAATAAGCAACCAACTTTT  443

seq1  ACTCTTGTCAAAACTATATTTTTGAAGTTCCTTCATATCCTTTTTTTCTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGTCAAAACTATATTTTTGAAGTTCCTTCATATCCTTTTTTTCTC  493

seq1  TAGAAATCATGACCATAACCTTCTACTGTTGACTTCAGTATGATATTATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCATGACCATAACCTTCTACTGTTGACTTCAGTATGATATTATA  543

seq1  TACATTAAAATGGTAACACAATTATCAAAACCATAACTCATCTCTAACCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAAAATGGTAACACAATTATCAAAACCATAACTCATCTCTAACCT  593

seq1  CATGAATAATGTGAAGTAACTGATAATAAAAATATCAAAAATAGGTGCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATAATGTGAAGTAACTGATAATAAAAATATCAAAAATAGGTGCTG  643

seq1  TCTTCAGCACCGGGGCTTTATGATCTGTTTGTAGAGTCTCTAATAATCTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCACCGGGGCTTTATGATCTGTTTGTAGAGTCTCTAATAATCTT  693

seq1  GCCAATTGCCTCGGTGGGTTTGAGTATTACCATGGAATTAATTTGACCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATTGCCTCGGTGGGTTTGAGTATTACCATGGAATTAATTTGACCAA  743

seq1  ATATAACCAATTCTTGGCATTATATGCTCCATTTTGTGACAATAGGTGGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACCAATTCTTGGCATTATATGCTCCATTTTGTGACAATAGGTGGC  793

seq1  CATTGAGGGCTCTGTTATTTGGTGACTATACTTAGATTGCCTTTCATATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGGGCTCTGTTATTTGGTGACTATACTTAGATTGCCTTTCATATA  843

seq1  TGTACATAACATATTCTACTGAGTTAGGACTCCATACAACCCTACAGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATAACATATTCTACTGAGTTAGGACTCCATACAACCCTACAGATG  893

seq1  GTCATTTTATTCCACAACAGCCTCCCACTTTCTTCCCTCTTGATATTTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTATTCCACAACAGCCTCCCACTTTCTTCCCTCTTGATATTTTA  943

seq1  TGCTCTCATTCCAGTCCATTACTTTGACTGTCCATAAATATCTATTGGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCATTCCAGTCCATTACTTTGACTGTCCATAAATATCTATTGGAC  993

seq1  TTTCTCATTCAGGGGAAATCCACAACAATCCTACAACTCAGTAAATACAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATTCAGGGGAAATCCACAACAATCCTACAACTCAGTAAATACAA  1043

seq1  AGAAGTCAAGCTGGTGCATACCTAGAGAATTC  1081
      ||||||||||||||||||||||||||||||||
seq2  AGAAGTCAAGCTGGTGCATACCTAGAGAATTC  1075