BAC Information

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BAC

Clone NameB6Ng01-137C22
Chromosome14 (Build37)
Map Location 18,440,551 - 18,575,159
singlet/doubletdoublet
Overlap genenone
Upstream geneTpi-rs9
Downstream geneThrb, LOC627608, Nr1d2, LOC632287, Rpl15, Nkiras1, Ube2e1, LOC627717, LOC238963, Ube2e2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137C22.bB6Ng01-137C22.g
ACCDH936765DH936766
length550966
definitionDH936765|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C22, 5' end.DH936766|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,574,606 - 18,575,159)(18,440,551 - 18,441,513)
sequence
ataacttaacacgagaaggaaaaacacaaatgggatttttagaaaaaaaa
aaaaaagcaccatctcttttatctacatttcagtttacacttggcctcta
aaggcaggatgaatgcaataggttgagaaagggagtaaatagattgagca
ataaaaacccatttgataatatacagggctataaaaatgactacactgaa
actattagccaaagacaaataatacccacaggagagaagggagcaactct
cgctgagttgtaaggtctgtgacaggaactgcaaatgtaacattgaagag
acatcttccaaactcatggctttctgtggctctgttgcatctgttctcat
cttttctgtttttttctctctcttattattatttgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtccccaaggttgtcagttataaccattct
aactaccacttttccttttacttctctccattttgctcatagcctactct
atggctagtcttgttatccatgcttgctcagggatttctttctctccatc

gaattctgaatgcttgtaagaacatttcaagaaaataagacaagggtctt
gtgccctcagtctattttcaaaaccatggaatttctcttgaaatgtactt
ttatgcccctcccaggtgtagtgggtaggggtgaatttaatttagattat
tcattacaccaagatattaatatttgtttatatgcctcctttaaaaaaaa
aaacatgtttttgccatgtatggcttgttgatctgtggcttgcccaacat
gtgtagcctgcatgccactatgtgtcttacccatgtacctgtatacttta
ttcatgtgacttctcttaaccctcagagtaataaattgtctgatgctctg
agtaatgttcaatatttcatgagactttagtctgcctcctttttaggctc
tattttcccaggtccaacaaccaattagcgtggttaacatttgaggaaca
ttggaagtcctaggggaatcttctttaatagccaggaagagtaagtctcc
tcatccctgggcttctgctctgagactgcctttactattaattcagtgtt
gttgctttcgttcatatttttaactgtttaagctgctttttattttctga
cttaattttggtatgcattatgtatctaaggatttatctatttctttttt
tttttattagatattttctatatttacatttcaaatgctatcccgaaagg
ttccctatacactcccccgaccttactcccctacccatccactcccactt
cttggccctggagttcccctatactgggacatataataccaagtggccac
tcttcccagtgatggccgactaggcccttcttctgctacatatgcagcta
aagacatgagctctgggggtactggttaggtcatatggtgttccacctat
agggttgcaggcaacttcagctcctttgagtgcttttctttagctcctcc
atgggggggggggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_18574606_18575159
seq2: B6Ng01-137C22.b_46_601 (reverse)

seq1  GATGGAGAG-ATGGAATCCCTGAGCAAGC-TGGATAACAAGACTAGCCAT  48
      ||||||||| | | ||||||||||||||| ||||||||||||||||||||
seq2  GATGGAGAGAAAGAAATCCCTGAGCAAGCATGGATAACAAGACTAGCCAT  50

seq1  AGAGTAGGCTATGAGCAAAATGGAGAGAAGTAAAAGGAAAAGTGGTAGTT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGGCTATGAGCAAAATGGAGAGAAGTAAAAGGAAAAGTGGTAGTT  100

seq1  AGAATGGTTATAACTGACAACCTTGGGAACACACACACACACACACACAC  148
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGAATGGTTATAACTGACAACCTTGGGGACACACACACACACACACACAC  150

seq1  ACACACACACACACACAAATAATAATAAGAGAGAGAAAAAAACAGAAAAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACAAATAATAATAAGAGAGAGAAAAAAACAGAAAAG  200

seq1  ATGAGAACAGATGCAACAGAGCCACAGAAAGCCATGAGTTTGGAAGATGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAACAGATGCAACAGAGCCACAGAAAGCCATGAGTTTGGAAGATGT  250

seq1  CTCTTCAATGTTACATTTGCAGTTCCTGTCACAGACCTTACAACTCAGCG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCAATGTTACATTTGCAGTTCCTGTCACAGACCTTACAACTCAGCG  300

seq1  AGAGTTGCTCCCTTCTCTCCTGTGGGTATTATTTGTCTTTGGCTAATAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGCTCCCTTCTCTCCTGTGGGTATTATTTGTCTTTGGCTAATAGT  350

seq1  TTCAGTGTAGTCATTTTTATAGCCCTGTATATTATCAAATGGGTTTTTAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTAGTCATTTTTATAGCCCTGTATATTATCAAATGGGTTTTTAT  400

seq1  TGCTCAATCTATTTACTCCCTTTCTCAACCTATTGCATTCATCCTGCCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAATCTATTTACTCCCTTTCTCAACCTATTGCATTCATCCTGCCTT  450

seq1  TAGAGGCCAAGTGTAAACTGAAATGTAGATAAAAGAGATGGTGCTTTTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCCAAGTGTAAACTGAAATGTAGATAAAAGAGATGGTGCTTTTTT  500

seq1  TTTTTTTTCTAAAAATCCCATTTGTGTTTTTCCTTCTCGTGTTAAGTTAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTAAAAATCCCATTTGTGTTTTTCCTTCTCGTGTTAAGTTAT  550

seq1  GAATTC  554
      ||||||
seq2  GAATTC  556

seq1: chr14_18440551_18441513
seq2: B6Ng01-137C22.g_65_1030

seq1  GAATTCTGAATGCTTGTAAGAACATTTCAAGAAAATAAGACAAGGGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATGCTTGTAAGAACATTTCAAGAAAATAAGACAAGGGTCTT  50

seq1  GTGCCCTCAGTCTATTTTCAAAACCATGGAATTTCTCTTGAAATGTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCTCAGTCTATTTTCAAAACCATGGAATTTCTCTTGAAATGTACTT  100

seq1  TTATGCCCCTCCCAGGTGTAGTGGGTAGGGGTGAATTTAATTTAGATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCCCCTCCCAGGTGTAGTGGGTAGGGGTGAATTTAATTTAGATTAT  150

seq1  TCATTACACCAAGATATTAATATTTGTTTATATGCCTCCTTTAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACACCAAGATATTAATATTTGTTTATATGCCTCCTTTAAAAAAAA  200

seq1  AAACATGTTTTTGCCATGTATGGCTTGTTGATCTGTGGCTTGCCCAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTTTTTGCCATGTATGGCTTGTTGATCTGTGGCTTGCCCAACAT  250

seq1  GTGTAGCCTGCATGCCACTATGTGTCTTACCCATGTACCTGTATACTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGCCTGCATGCCACTATGTGTCTTACCCATGTACCTGTATACTTTA  300

seq1  TTCATGTGACTTCTCTTAACCCTCAGAGTAATAAATTGTCTGATGCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTGACTTCTCTTAACCCTCAGAGTAATAAATTGTCTGATGCTCTG  350

seq1  AGTAATGTTCAATATTTCATGAGACTTTAGTCTGCCTCCTTTTTAGGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGTTCAATATTTCATGAGACTTTAGTCTGCCTCCTTTTTAGGCTC  400

seq1  TATTTTCCCAGGTCCAACAACCAATTAGCGTGGTTAACATTTGAGGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCCAGGTCCAACAACCAATTAGCGTGGTTAACATTTGAGGAACA  450

seq1  TTGGAAGTCCTAGGGGAATCTTCTTTAATAGCCAGGAAGAGTAAGTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGTCCTAGGGGAATCTTCTTTAATAGCCAGGAAGAGTAAGTCTCC  500

seq1  TCATCCCTGGGCTTCTGCTCTGAGACTGCCTTTACTATTAATTCAGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTGGGCTTCTGCTCTGAGACTGCCTTTACTATTAATTCAGTGTT  550

seq1  GTTGCTTTCGTTCATATTTTTAACTGTTTAAGCTGCTTTTTATTTTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTTCGTTCATATTTTTAACTGTTTAAGCTGCTTTTTATTTTCTGA  600

seq1  CTTAATTTTGGTATGCATTATGTATCTAAGGATTTATCTATTTC-TTTTT  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTAATTTTGGTATGCATTATGTATCTAAGGATTTATCTATTTCTTTTTT  650

seq1  TTTTTATTAGATATTTTCTATATTTACATTTCAAATGCTATCCCGAAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAGATATTTTCTATATTTACATTTCAAATGCTATCCCGAAAGG  700

seq1  TTCCCTATACACTCCCCCGACCTTACTCCCCTACCCATCCACTCCCACTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTATACACTCCCCCGACCTTACTCCCCTACCCATCCACTCCCACTT  750

seq1  CTTGGCCCTGGAGTTCCCCTATACTGGGACATATAATACCAAGTGGCCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCCTGGAGTTCCCCTATACTGGGACATATAATACCAAGTGGCCAC  800

seq1  TCTTCCCAGTGATGGCCGACTAGG-CCATCTTCTGCTACATATGCAGCTA  848
      |||||||||||||||||||||||| || ||||||||||||||||||||||
seq2  TCTTCCCAGTGATGGCCGACTAGGCCCTTCTTCTGCTACATATGCAGCTA  850

seq1  AAGACATGAGCTCTGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTA  898
      ||||||||||||||||||||||||||||| ||||| || |||||||||||
seq2  AAGACATGAGCTCTGGGGGTACTGGTTAGGTCATA-TGGTGTTCCACCTA  899

seq1  TAGGGTTGCAGGCACCTTCAGCTCC-TTGAGTGC-TTTCTTTAGCTCCTC  946
      |||||||||||||| |||||||||| |||||||| |||||||||||||||
seq2  TAGGGTTGCAGGCAACTTCAGCTCCTTTGAGTGCTTTTCTTTAGCTCCTC  949

seq1  CATGGGGGGGGGGGGTC  963
      ||||||||||||||| |
seq2  CATGGGGGGGGGGGGGC  966