BAC Information

Click to search

BAC

Clone NameB6Ng01-137L18
Chromosome14 (Build37)14 (Build37)
Map Location 6,196,495 - 6,197,6775,805,398 - 5,806,547
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215, LOC100041226, ENSMUSG00000057445, LOC100041598, LOC100041243, EG666684, LOC100041268, LOC100041279, LOC100041651, LOC100041287, LOC100041299, LOC666637, EG622640
Downstream geneLOC100041333, LOC100041678, LOC100041702, LOC100041363, LOC100041721, LOC100041784, LOC100041735, LOC100041406, LOC100041825, LOC100041421, LOC100041817, LOC100041431, LOC100041438, LOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137L18.bB6Ng01-137L18.g
ACCDH937171DH937172
length1,1631,131
definitionDH937171|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L18, 5' end.DH937172|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(6,196,495 - 6,197,677)(5,805,398 - 5,806,547)
sequence
gaattctgtaaccaaaggtgtgctctataatggctcaccaatggagatct
caaagtaacagtaataaaaaggaattcgtgagcagcaggggagaaatatt
tgaaaatctaaaacactaaagaaagtcaaggaactttttatgaaccaaat
gagacaatgtgctatgtatttgaaattgtagtaggcattttgagaaatag
attttgatgcaggagacctgccataaattccaagtcagattgggcctgag
gtatgctaggggactccctcaaaacaaagaaacacactgaacaaagaaaa
gacaagtggatgtcccttaggtcagagaaccactgtgaaagctttgaact
aggagaagcagttagtaggtcagatactattttaaattggggattccttg
aaagtttctcagaagccatgatctttcaccagggttttcccctgagctgc
ctttagtgggaaatgaggctgcttttctttctttgcctacacagtatttc
cacccatcctgggtttcctctacagctgcagatgctgtagagatgcagtc
atttacttagcaggaaccagcttagactggctttgcttttcaaagttaca
ggccttaggagctggctactgaattctgtgttgatcagagcgggctgcaa
agctaggtttttataagtaagatacctgcactttaaggaattaattgcct
ggctcctggatgtgaagctgtgcaatgtgtctttaagcaatcagcatcct
ttgaaagagtaataaatggaacccgtattcttcaccaaataggcatgggc
cttagaccacctttcacttcagtcacccttgactggattctgggacatgt
tgctatataaaacctgaaagtacggcttttgagatggctcaatggggaag
ggcactgactgttctccaaaggtcctgagttcaaatcccagtaaccacat
ggtggctcacagccatccctaacgagatctgacttcctcttctgatttgt
ctgaagaaagctacagtgtacttacatataataaataattaaatctttaa
aaccttgaaagtttatttgtgggctgaaatacaggatagctgcagtgact
ttcacttattaaagagtgggaggactagatctattccattttgtcagctt
gtgccctctgtct
gaattcacccttagctcaaggtgagtgccaggactatggaggggctagaa
gaggggtcctctacaggagacttaaccacagctctgtgtgtctaagcctt
accccctgccatccccatcccaccacagcccactgtccctcacgcccttc
aggtccttgatgaagaagacaatccttgcttgtctaaactgttttattca
gggcagatgaaaatgcacatgtcttactctgggtgaaccagagattgaat
atctttcacagaattggagggaagctcattggctaatcacttagagccta
gttagataccccatcacaatagaaaactctatgcaatatcactggttgtt
atggtcctctggtgacacagtcaactgcctcacaaaggatagctatgtgc
actccaggcaagaatgtaaattggtggagccacaggcaaaacaacatgga
agttcctcaaaagaaatataaaaatgaggtagcttcctcatgaggtgttt
gagataattgtctcatattggcctgtaggcaagtctgtggggcattttct
tgattaaggattgatgtggtagggctaagcccactgcaagaagtggattg
ccttggcaggtggtcctgtggtgtaagaaagcaggctgaagaagccatga
ggagcaagcttgtaagcagggctccaccatggcgtcctgcactgacttca
gttcatgatgttctataactgtaagcttggagaaattctttactgcctgt
ggtagtcactgttctattgctgtgatgaaatactataaacaaggtaacat
acaatgaagcttttatctgagggcttgcttagagtttcattgagtccatg
gtcatcatgtttggaagtatggcccccagacaggcaggcctagtgctaga
gcacactaaaagcttactacatcctgatctgagggagaaagagattgaca
ctgattctgacttggtcttttgaatggctgagaagacttacgaacaacac
tgttccagagtaaaacatagaaaatacttcgtgttactctactaagagta
aagatttgtatgtatgaccttcaagtctctggaagaagaactagagaatt
ctagaagattgaagctctatgctcatggatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_6196495_6197677
seq2: B6Ng01-137L18.b_48_1210

seq1  GAATTCTGTAACCAAAGGTGTGCTCTATAATGGCTCACCAATGGAGATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAACCAAAGGTGTGCTCTATAATGGCTCACCAATGGAGATCT  50

seq1  CAAAGTAACAGTAATAAAAAGGAATTCGTGAGCAGCAGGGGAGAAATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTAACAGTAATAAAAAGGAATTCGTGAGCAGCAGGGGAGAAATATT  100

seq1  TGAAAATCTAAAACACTAAAGAAAGTCAAGGAACTTTTTATGAACCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATCTAAAACACTAAAGAAAGTCAAGGAACTTTTTATGAACCAAAT  150

seq1  GAGACAATGTGCTATGTATTTGAAATTGTAGTAGGCATTTTGAGAAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAATGTGCTATGTATTTGAAATTGTAGTAGGCATTTTGAGAAATAG  200

seq1  ATTTTGATGCAGGAGACCTGCCATAAATTCCAAGTCAGATTGGGCCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATGCAGGAGACCTGCCATAAATTCCAAGTCAGATTGGGCCTGAG  250

seq1  GTATGCTAGGGGACTCCCTCAAAACAAAGAAACACACTGAACAAAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTAGGGGACTCCCTCAAAACAAAGAAACACACTGAACAAAGAAAA  300

seq1  GACAAGTGGATGTCCCTTAGGTCAGAGAACCACTGTGAAAGCTTTGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTGGATGTCCCTTAGGTCAGAGAACCACTGTGAAAGCTTTGAACT  350

seq1  AGGAGAAGCAGTTAGTAGGTCAGATACTATTTTAAATTGGGGATTCCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAGCAGTTAGTAGGTCAGATACTATTTTAAATTGGGGATTCCTTG  400

seq1  AAAGTTTCTCAGAAGCCATGATCTTTCACCAGGGTTTTCCCCTGAGCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTCTCAGAAGCCATGATCTTTCACCAGGGTTTTCCCCTGAGCTGC  450

seq1  CTTTAGTGGGAAATGAGGCTGCTTTTCTTTCTTTGCCTACACAGTATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTGGGAAATGAGGCTGCTTTTCTTTCTTTGCCTACACAGTATTTC  500

seq1  CACCCATCCTGGGTTTCCTCTACAGCTGCAGATGCTGTAGAGATGCAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCATCCTGGGTTTCCTCTACAGCTGCAGATGCTGTAGAGATGCAGTC  550

seq1  ATTTACTTAGCAGGAACCAGCTTAGACTGGCTTTGCTTTTCAAAGTTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTAGCAGGAACCAGCTTAGACTGGCTTTGCTTTTCAAAGTTACA  600

seq1  GGCCTTAGGAGCTGGCTACTGAATTCTGTGTTGATCAGAGCGGGCTGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTAGGAGCTGGCTACTGAATTCTGTGTTGATCAGAGCGGGCTGCAA  650

seq1  AGCTAGGTTTTTATAAGTAAGATACCTGCACTTTAAGGAATTAATTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGTTTTTATAAGTAAGATACCTGCACTTTAAGGAATTAATTGCCT  700

seq1  GGCTCCTGGATGTGAAGCTGTGCAATGTGTCTTTAAGCAATCAGCATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTGGATGTGAAGCTGTGCAATGTGTCTTTAAGCAATCAGCATCCT  750

seq1  TTGAAAGAGTAATAAATGGAACCCGTATTCTTCACCAAATAGGCATGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGAGTAATAAATGGAACCCGTATTCTTCACCAAATAGGCATGGGC  800

seq1  CTTAGACCACCTTTCACTTCAGTCACCCTTGACTGGATTCTGGGACATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACCACCTTTCACTTCAGTCACCCTTGACTGGATTCTGGGACATGT  850

seq1  TGCTATATAAAACCTGAAAGTACGGCTTTTGAGATGGCTCAATGGGGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATATAAAACCTGAAAGTACGGCTTTTGAGATGGCTCAATGGGGAAG  900

seq1  GGCACTGACTGTTCTTCCAAAGGTCCTGAGTTCAAATCCCAGTAACCACA  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGCACTGACTGTTC-TCCAAAGGTCCTGAGTTCAAATCCCAGTAACCACA  949

seq1  TGGTGGCTCACAGCCATCCCTAACGAGATCTGACTTCCTCTTCTGATATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGGTGGCTCACAGCCATCCCTAACGAGATCTGACTTCCTCTTCTGATTTG  999

seq1  TCTGAAGACAGCTACAGTGTACTTACATATAATAAATAAATAAATCTTTA  1050
      |||||||| |||||||||||||||||||||||||||||| ||||||||| 
seq2  TCTGAAGAAAGCTACAGTGTACTTACATATAATAAATAATTAAATCTTT-  1048

seq1  AAAAAACCTGAAAGTTTAATGTGTGGGTTGAAATACAGGATAGCTGCCAA  1100
       |||| | ||||||||| || |||||| |||||||||||||||||||   
seq2  -AAAACCTTGAAAGTTT-ATTTGTGGGCTGAAATACAGGATAGCTGC---  1093

seq1  AGTGACCTTTCACTCTATAGAGTGTGGGGAAGAGAACATTAGAATCATAA  1150
      ||||| ||||||||   || || ||||    ||| ||  ||| ||| || 
seq2  AGTGA-CTTTCACTTATTAAAGAGTGG----GAGGAC--TAG-ATC-TAT  1134

seq1  TCACATTTTGGTCCCAGCTTGTGCCCTCTGTCT  1183
      || |||||||    |||||||||||||||||||
seq2  TC-CATTTTG---TCAGCTTGTGCCCTCTGTCT  1163

seq1: chr14_5805398_5806547
seq2: B6Ng01-137L18.g_78_1199

seq1  CTTAGCTTAAGGTGAGTGCCAGGACTATGGAGGGGCTAGAAGAGGGGTCC  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTCAAGGTGAGTGCCAGGACTATGGAGGGGCTAGAAGAGGGGTCC  50

seq1  TCTACAGGAGACTTAACAACAGCTCTGTGTGTCTAAGCCTTACCCCCTGC  100
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCTACAGGAGACTTAACCACAGCTCTGTGTGTCTAAGCCTTACCCCCTGC  100

seq1  CATCCCCATCCCACCACAGCCCACTGTCCCTCACGCCCTTCAGGTCCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCATCCCACCACAGCCCACTGTCCCTCACGCCCTTCAGGTCCTTG  150

seq1  ATGAAGAAGACAATCTTTGCTTGTCTAAACTGTTTTATTCAGGGCAGATG  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAGACAATCCTTGCTTGTCTAAACTGTTTTATTCAGGGCAGATG  200

seq1  AAAATGCACATGTCTTACTCTGGGTGAACCAGAGATTGAATATCTTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCACATGTCTTACTCTGGGTGAACCAGAGATTGAATATCTTTCAC  250

seq1  AGAATTGGAGGGAAGCTCATTGGCTAATCACTTAGAGCCTAGTTAGATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGGAGGGAAGCTCATTGGCTAATCACTTAGAGCCTAGTTAGATAC  300

seq1  CCCATCACAATAGAAAACTCTATGCAATATCACTGGTTGTTATGGTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCACAATAGAAAACTCTATGCAATATCACTGGTTGTTATGGTCCTC  350

seq1  TGGTGACACAGTCAACTGCCTCACAAAGGATAGCTATGTGCACTCCAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACACAGTCAACTGCCTCACAAAGGATAGCTATGTGCACTCCAGGC  400

seq1  AAGAATGTAAATTGGTGGAGCCACAGGCAAAACAACATGGAAGTTCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGTAAATTGGTGGAGCCACAGGCAAAACAACATGGAAGTTCCTCA  450

seq1  AAAGAAATATAAAAATGAGGTAGCTTCCTCATGAGGTGTTTGAGATAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATATAAAAATGAGGTAGCTTCCTCATGAGGTGTTTGAGATAATT  500

seq1  GTCTCATATTGGCCTGTAGGCAAGTCTGTGGGGCATTTTCTTGATTAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATATTGGCCTGTAGGCAAGTCTGTGGGGCATTTTCTTGATTAAGG  550

seq1  ATTGATGTGGTAGGGCTAAGCCCACTGCAAGAAGTGGATTGCCTTGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGTGGTAGGGCTAAGCCCACTGCAAGAAGTGGATTGCCTTGGCAG  600

seq1  GTGGTCCTGTGGTATAAGAAAGCAGGCTGAAGAAGCCATGAGGAGCAAGC  650
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTGGTCCTGTGGTGTAAGAAAGCAGGCTGAAGAAGCCATGAGGAGCAAGC  650

seq1  TTGTAAGCAGGGCTCCACCATGGCGTCCTGCACTGACTTCAGTTCATGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGCAGGGCTCCACCATGGCGTCCTGCACTGACTTCAGTTCATGAT  700

seq1  GGTCTATAACTGTAAGCTGGGAGAAATTCTTTACTGCCTGTGGTAGTCAC  750
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GTTCTATAACTGTAAGCTTGGAGAAATTCTTTACTGCCTGTGGTAGTCAC  750

seq1  TGTTCTATTGCTGTGATGAAATACTATAAACAAGGTAACATACAATGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATTGCTGTGATGAAATACTATAAACAAGGTAACATACAATGAAG  800

seq1  CTTTTATCTGAGGGCTTGCTTAGAGTTTCATAGAGTCCATGGTCATCATG  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTTTATCTGAGGGCTTGCTTAGAGTTTCATTGAGTCCATGGTCATCATG  850

seq1  TTTGGAAGTATGGCCCCCAGACAGGCAGGCCTAGTGCTAGAGCAACAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||| ||| ||
seq2  TTTGGAAGTATGGCCCCCAGACAGGCAGGCCTAGTGCTAGAGC-ACA-CT  898

seq1  AAGAGCTTACTAACATCCTGATCTGGAGGGAGAAAGAGATTGACACTGAT  950
      || |||||||| |||||||||||| |||||||||||||||||||||||||
seq2  AAAAGCTTACT-ACATCCTGATCT-GAGGGAGAAAGAGATTGACACTGAT  946

seq1  TCTGACTTGGTCTTTTGAAATGGGCTGAGAAAGAACTTACGGAAACAACA  1000
      |||||||||||||||||||   |||||||||   |||||||  |||||||
seq2  TCTGACTTGGTCTTTTGAA--TGGCTGAGAA--GACTTACG--AACAACA  990

seq1  CTGTTCACAAGAGTAAAAACCAATAGAAAATACCTTCGTGTTACTCTAAC  1050
      |||||  | |||||||||    |||||||||| |||||||||||||| ||
seq2  CTGTT--CCAGAGTAAAA---CATAGAAAATA-CTTCGTGTTACTCT-AC  1033

seq1  TAAGGAAGTAAAAGATCTGTATGATATGAACTTCAAGTCTCTGAAGAAAG  1100
      ||||  ||| |||||| |||||| ||||| ||||||||||||| |  |||
seq2  TAAG--AGT-AAAGATTTGTATG-TATGACCTTCAAGTCTCTGGAAGAAG  1079

seq1  ATATTAAAGAAGATCTCAGAAGATGGAAAGGTCTTCTATGCTCATGGATT  1150
      | | || ||||  ||| ||||||| |||      ||||||||||||||||
seq2  A-ACTAGAGAA-TTCT-AGAAGATTGAA----GCTCTATGCTCATGGATT  1122