BAC Information

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BAC

Clone NameB6Ng01-139A15
Chromosome14 (Build37)
Map Location 60,595,139 - 60,756,187
singlet/doubletdoublet
Overlap geneAtp8a2, LOC668162
Upstream gene1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream geneLOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep, LOC100043586, Tnfrsf19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139A15.bB6Ng01-139A15.g
ACCDH938126DH938127
length1,082906
definitionDH938126|Mus musculus domesticus DNA, BAC clone: B6Ng01-139A15, 5' end.DH938127|Mus musculus domesticus DNA, BAC clone: B6Ng01-139A15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,755,097 - 60,756,187)(60,595,139 - 60,596,043)
sequence
gaattctctgggtctcatatccttcaggggaggaaggagatggctaccaa
catttgggtatcgtcctgagcataattatgttcaagtatgaaaattatga
gaagcaggatagggcactggacatctaagacttaagatctagattttaat
ccgaatcccgtaggacatcatttgagttgtaataagaacaagatgctaaa
atggattctttttggaagaggctgtggaaaaaaattattgaagcatttat
ttttaaaaattgtctattggtttatttttccaaagtagcattttgcctga
atctctgaaaaacgtaagtgtaataatgttcaagcttcagtggccccagt
gccatggatttgcccttgagatcgctttcaggaagatgctcttgtttcgg
ttttccgagaacttcacacttgtgcgccacctctacctcattccactctt
ccctccctctccaactcctccatacccctcccaaactcacgttctcttct
tacttatgattgttacatgtatatatgtgtgtgcgtgtggctgagtccac
atgcacatgtatccagggtaaccgcgtgggatgggagagcctatgcagga
gttgtccctggaggaaaatgattctctccttcatctgggggaggagccat
atggaattacccctgtccatattgcaatgtcagttgatagcttgcagggc
ttgcttaggcaactatgttattgcaagttcacgggtacatttttcttgtc
atatctaggggacactatctgacagcagatgttcctgggcctctggctct
tacactccttccattcccttcttctgtgttttcttttcctataggtgtag
agttgtgttgcaggttcacttggggctgggcaaccatagtcatttattct
aagcctgtccacagttgtggatctctgaaatagttacagttttttctctc
agtggttgactaggtcagcatcatcttagaggtctacttcaccacttctt
tatagattcatcccctctggttcgtagctcacatcaaattcttatatcat
ttgttcatctttcccccggttggtatacttga
gaattccagggccttcactacagcgtcttccaaagccatgaattaccagg
accttgaacacaggactaaggggaaaaaaccatgttctttctcctcctgc
agaagcctggccattcctaagtacttagagcaaggcagttttctcttagg
aaataacatctatgggggttcaattcagaaagtgccggaaacacgtgctt
ggactggggaggtggctcaggtttaaagtattggtgtgtgtgtgaggccc
tgggttcaattcctagcttcaaacacacaagaaaatgaagcatacatgtg
taacctgtgtctgaatgtatattttaaaggtagaatgtcactgctccgcc
agcaagcaatagtattaatcagggttcattctatgagcagcacatagtga
ctcaaacccctggctacggccatactctacctgcccgttctaacatcacc
aagaggcagacccagagcaaagagagagaatggccatactgacagaaaat
gattctctaggggaaaaaaaaaggttatgcaggaaataggcattttgtaa
atttgtatggttttctgttctttgattcttatatttccaaatcctgaatt
aattaagaaatggagagaaaaaaaaaaacccgtcattgcttcagagtcta
cattcagatctttaaggaaaatcatgatatacttgaataagaataacgaa
gccacaactatgtacaatgaatttgtatctattaaaatttcaatgagcaa
tacaatgctttcaccacaactttacataaatattgaccctttcttatatt
ttcccatggaagcttttaactgagacccactcacaggacaaaagtaagtt
ttgcgatgcatatgctcgtgtgtgcgtgtgcatgtgcgtgtgcgtgtgcg
tgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60755097_60756187
seq2: B6Ng01-139A15.b_43_1124 (reverse)

seq1  TCAAGTATAACAACAGAGGGAAATGATTGAACAAATGATTATAAGAATTT  50
      ||||||||| |||| | |||||| || ||||||||||| |||||||||||
seq2  TCAAGTATACCAACCGGGGGAAA-GA-TGAACAAATGA-TATAAGAATTT  47

seq1  GAATGTGAGCTACAGAACCAGAGGGGATTGAATCTAATAAAGAAGTTGCT  100
      | ||||||||||| ||||||||||||| ||||||| ||||||||| || |
seq2  G-ATGTGAGCTAC-GAACCAGAGGGGA-TGAATCT-ATAAAGAAG-TGGT  92

seq1  GAAGTAGAACCTCTAAGATGATGCTGACCTAGTCAACCACTGAGAGAAAA  150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAG-ACCTCTAAGATGATGCTGACCTAGTCAACCACTGAGAGAAAA  141

seq1  AACTGTAACTATTACAGAGATCCACAACTGGTGGACAGGCATAGAATAAA  200
      ||||||||||||| ||||||||||||||| |||||||||| |||||||||
seq2  AACTGTAACTATTTCAGAGATCCACAACT-GTGGACAGGCTTAGAATAAA  190

seq1  TGACTATTGGTGCCCAGCCCCAAGTGAACCTGCAACACAAACTCTACACC  250
      ||||||| | |||||||||||||||||||||||||||| |||||||||||
seq2  TGACTATGGTTGCCCAGCCCCAAGTGAACCTGCAACAC-AACTCTACACC  239

seq1  TATAGGAAAAGAAAACACAGAAGAAGGG-ATGGAAGGAGTGTAAGAGCCA  299
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TATAGGAAAAGAAAACACAGAAGAAGGGAATGGAAGGAGTGTAAGAGCCA  289

seq1  GAGGCCCAGG-ACATCTGCTGTCAGATAGTGTCCCCTAGATATGACAAGA  348
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCCAGGAACATCTGCTGTCAGATAGTGTCCCCTAGATATGACAAGA  339

seq1  AAAATGTACCCGTGAACTTGCAATAACATAGTTGCCTAAGCAAGCCCTGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTACCCGTGAACTTGCAATAACATAGTTGCCTAAGCAAGCCCTGC  389

seq1  AAGCTATCAACTGACATTGCAATATGGACAGGGGTAATTCCATATGGCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATCAACTGACATTGCAATATGGACAGGGGTAATTCCATATGGCTC  439

seq1  CTCCCCCAGATGAAGGAGAGAATCATTTTCCTCCAGGGACAACTCCTGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCAGATGAAGGAGAGAATCATTTTCCTCCAGGGACAACTCCTGCA  489

seq1  TAGGCTCTCCCATCCCACGCGGTTACCCTGGATACATGTGCATGTGGACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTCTCCCATCCCACGCGGTTACCCTGGATACATGTGCATGTGGACT  539

seq1  CAGCCACACGCACACACATATATACATGTAACAATCATAAGTAAGAAGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACACGCACACACATATATACATGTAACAATCATAAGTAAGAAGAG  589

seq1  AACGTGAGTTTGGGAGGGGTATGGAGGAGTTGGAGAGGGAGGGAAGAGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGAGTTTGGGAGGGGTATGGAGGAGTTGGAGAGGGAGGGAAGAGTG  639

seq1  GAATGAGGTAGAGGTGGCGCACAAGTGTGAAGTTCTCGGAAAACCGAAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGTAGAGGTGGCGCACAAGTGTGAAGTTCTCGGAAAACCGAAAC  689

seq1  AAGAGCATCTTCCTGAAAGCGATCTCAAGGGCAAATCCATGGCACTGGGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCATCTTCCTGAAAGCGATCTCAAGGGCAAATCCATGGCACTGGGG  739

seq1  CCACTGAAGCTTGAACATTATTACACTTACGTTTTTCAGAGATTCAGGCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAAGCTTGAACATTATTACACTTACGTTTTTCAGAGATTCAGGCA  789

seq1  AAATGCTACTTTGGAAAAATAAACCAATAGACAATTTTTAAAAATAAATG  848
      |||||||||||||||||||||||||||||||||||||||||||       
seq2  AAATGCTACTTTGGAAAAATAAACCAATAGACAATTTTTAAAANNNNNNN  839

seq1  CTTCAATAATTTTTTTCCACAGCCTCTTCCAAAAAGAATCCATTTTAGCA  898
                ||||||||||||||||||||||||||||||||||||||||
seq2  NNNNNNNNNNTTTTTTCCACAGCCTCTTCCAAAAAGAATCCATTTTAGCA  889

seq1  TCTTGTTCTTATTACAACTCAAATGATGTCCTACGGGATTCGGATTAAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTCTTATTACAACTCAAATGATGTCCTACGGGATTCGGATTAAAA  939

seq1  TCTAGATCTTAAGTCTTAGATGTCCAGTGCCCTATCCTGCTTCTCATAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATCTTAAGTCTTAGATGTCCAGTGCCCTATCCTGCTTCTCATAAT  989

seq1  TTTCATACTTGAACATAATTATGCTCAGGACGATACCCAAATGTTGGTAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATACTTGAACATAATTATGCTCAGGACGATACCCAAATGTTGGTAG  1039

seq1  CCATCTCCTTCCTCCCCTGAAGGATATGAGACCCAGAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCCTTCCTCCCCTGAAGGATATGAGACCCAGAGAATTC  1082

seq1: chr14_60595139_60596043
seq2: B6Ng01-139A15.g_67_972

seq1  GAATTCCAGGGCCTTCACTACAGCGTCTTCCAAAGCCATGAATTACCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCCTTCACTACAGCGTCTTCCAAAGCCATGAATTACCAGG  50

seq1  ACCTTGAACACAGGACTAAGGGGAAAAAACCATGTTCTTTCTCCTCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAACACAGGACTAAGGGGAAAAAACCATGTTCTTTCTCCTCCTGC  100

seq1  AGAAGCCTGGCCATTCCTAAGTACTTAGAGCAAGGCAGTTTTCTCTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTGGCCATTCCTAAGTACTTAGAGCAAGGCAGTTTTCTCTTAGG  150

seq1  AAATAACATCTATGGGGGTTCAATTCAGAAAGTGCCGGAAACACGTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACATCTATGGGGGTTCAATTCAGAAAGTGCCGGAAACACGTGCTT  200

seq1  GGACTGGGGAGGTGGCTCAGGTTTAAAGTATTGGTGTGTGTGTGAGGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGGGGAGGTGGCTCAGGTTTAAAGTATTGGTGTGTGTGTGAGGCCC  250

seq1  TGGGTTCAATTCCTAGCTTCAAACACACAAGAAAATGAAGCATACATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCAATTCCTAGCTTCAAACACACAAGAAAATGAAGCATACATGTG  300

seq1  TAACCTGTGTCTGAATGTATATTTTAAAGGTAGAATGTCACTGCTCCGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGTGTCTGAATGTATATTTTAAAGGTAGAATGTCACTGCTCCGCC  350

seq1  AGCAAGCAATAGTATTAATCAGGGTTCATTCTATGAGCAGCACATAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCAATAGTATTAATCAGGGTTCATTCTATGAGCAGCACATAGTGA  400

seq1  CTCAAACCCCTGGCTACGGCCATACTCTACCTGCCCGTTCTAACATCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACCCCTGGCTACGGCCATACTCTACCTGCCCGTTCTAACATCACC  450

seq1  AAGAGGCAGACCCAGAGCAAAGAGAGAGAATGGCCATACTGACAGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCAGACCCAGAGCAAAGAGAGAGAATGGCCATACTGACAGAAAAT  500

seq1  GATTCTCTAGGGGAAAAAAAAAGGTTATGCAGGAAATAGGCATTTTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCTAGGGGAAAAAAAAAGGTTATGCAGGAAATAGGCATTTTGTAA  550

seq1  ATTTGTATGGTTTTCTGTTCTTTGATTCTTATATTTCCAAATCCTGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATGGTTTTCTGTTCTTTGATTCTTATATTTCCAAATCCTGAATT  600

seq1  AATTAAGAAATGGAGAGAAAAAAAAAAACCCGTCATTGCTTCAGAGTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAAATGGAGAGAAAAAAAAAAACCCGTCATTGCTTCAGAGTCTA  650

seq1  CATTCAGATCTTTAAGGAAAATCATGATATACTTGAATAAGAATAACGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGATCTTTAAGGAAAATCATGATATACTTGAATAAGAATAACGAA  700

seq1  GCCACAACTATGTACAATGAATTTGTATCTATTAAAATTTCAATGAGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAACTATGTACAATGAATTTGTATCTATTAAAATTTCAATGAGCAA  750

seq1  TACAATGCTTTCACCACAACTTTACATAAATATTGACCCTTTCTTATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGCTTTCACCACAACTTTACATAAATATTGACCCTTTCTTATATT  800

seq1  TTCCCATGGAAGC-TTTAACTGAGACCCACTCACAGGACAAAAGTAAGTT  849
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTCCCATGGAAGCTTTTAACTGAGACCCACTCACAGGACAAAAGTAAGTT  850

seq1  TTGCGATGCATATGCTCGTGTGTGCGTGTGCATGTGCGTGTGCGTGTGCG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGATGCATATGCTCGTGTGTGCGTGTGCATGTGCGTGTGCGTGTGCG  900

seq1  TGTGTG  905
      ||||||
seq2  TGTGTG  906