BAC Information

Click to search

BAC

Clone NameB6Ng01-139I15
Chromosome14 (Build37)
Map Location 74,699,782 - 74,700,870
singlet/doubletsinglet
Overlap genenone
Upstream geneRb1, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578, LOC629583
Downstream geneHtr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1, Cpb2, Zc3h13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139I15.bB6Ng01-139I15.g
ACCDH938496DH938497
length1,1181,078
definitionDH938496|Mus musculus domesticus DNA, BAC clone: B6Ng01-139I15, 5' end.DH938497|Mus musculus domesticus DNA, BAC clone: B6Ng01-139I15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactgggtggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcagaattgc
tctgtagtaaagctttaggtctggcatggtgattccaccagaagttcttt
ttatccttgagaagactttttgctatcctaggttttttgttattccagac
aaatttgcaaattgctcctttccattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttcctttcttcagagatttgaagtttatatac
agatctttcacctccttagttagagtcacgcccaagataattttatattt
atttgtgactattgagaaggtgttgtttcccttatttctttctcagcctg
ttattctttgaaagagaagggcatttgacttgtttgagttatttatatcc
agctaccttcaccgaagctgtttacagggttaggagtccctgggtgagtt
taggtcactttatatact
gaattccacagaccctccaaggatgtgcttcaaacaggagtctgtgcagt
taatacttagaaaagtgcttgagttctagcatgccagcactcttataaca
ccaaacatatgtgctgagagacagctgaggaggctatgtttccctaaaca
cctgtgaataaggatgtttagcaaacatgtatgtgctgcacagatatgca
aaccacagggacaggaagcagatcctgctgtcaaggcacctttctgtgac
agtggacaccagatatggcaaaggcacttggaagtattttcacagaagag
catgaagaacaatttggccccaagcctcatttgaaatgtgcgaggctcag
tactctggagtcaattagactcgatgtcgttctgcagcttatatgcttat
gaagaatatacttgtcacaagttactactaagtcactgattttgaacatc
tcttagtttaagattaatttcacattacatggagaaagtggtttgaatgt
gttaggtttcccatttattgctatctttttttttccctgtgttatataga
ttgatactatccctgtgctttgtcattataaatgaacctctctacctcaa
ggttgatttctgtcttcaaatacatatcatctggcaagcacacggataaa
ctgattttattgggttaatatttgatttgtgtgggttttttaccacttca
tttttaattctgaatgtaatatatccatgaacgttagatctgtgttctct
aaacacatgtatctagactcgcttttaaaatgtactttaaatttacatgt
ttagttaatgtgcatgttttttcaagtaagcaacattaaaaataaaccat
attaacattttatatccacatagtatataatttaatttcccccacacact
aatattttactcagcttctgtaggagtgaaattagcaattccaaatactc
tctggtaccctgtgtgttttgtagttttggtgttgtgtgactatgatctg
gccataacttacctctatcgtgacagctacttacatgcctcccactcaac
tgctttcatgctgtggacgacagtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74699782_74700870
seq2: B6Ng01-139I15.g_67_1144

seq1  GAATTCCACAGACCCTCCAAGGATGTGCTTCAAACAGGAGTCTGTGCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGACCCTCCAAGGATGTGCTTCAAACAGGAGTCTGTGCAGT  50

seq1  TAATACTTAGAAAAGTGCTTGAGTTCTAGCATGCCAGCACTCTTATAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTAGAAAAGTGCTTGAGTTCTAGCATGCCAGCACTCTTATAACA  100

seq1  CCAAACATATGTGCTGAGAGACAGCTGAGGAGGCTATGTTTCCCTAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACATATGTGCTGAGAGACAGCTGAGGAGGCTATGTTTCCCTAAACA  150

seq1  CCTGTGAATAAGGATGTTTAGCAAACATGTATGTGCTGCACAGATATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAATAAGGATGTTTAGCAAACATGTATGTGCTGCACAGATATGCA  200

seq1  AACCACAGGGACAGGAAGCAGATCCTGCTGTCAAGGCACCTTTCTGTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAGGGACAGGAAGCAGATCCTGCTGTCAAGGCACCTTTCTGTGAC  250

seq1  AGTGGACACCAGATATGGCAAAGGCACTTGGAAGTATTTTCACAGAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACACCAGATATGGCAAAGGCACTTGGAAGTATTTTCACAGAAGAG  300

seq1  CATGAAGAACAATTTGGCCCCAAGCCTCATTTGAAATGTGCGAGGCTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGAACAATTTGGCCCCAAGCCTCATTTGAAATGTGCGAGGCTCAG  350

seq1  TACTCTGGAGTCAATTAGACTCGATGTCGTTCTGCAGCTTATATGCTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGGAGTCAATTAGACTCGATGTCGTTCTGCAGCTTATATGCTTAT  400

seq1  GAAGAATATACTTGTCACAAGTTACTACTAAGTCACTGATTTTGAACATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATATACTTGTCACAAGTTACTACTAAGTCACTGATTTTGAACATC  450

seq1  TCTTAGTTTAAGATTAATTTCACATTACATGGAGAAAGTGGTTTGAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTTTAAGATTAATTTCACATTACATGGAGAAAGTGGTTTGAATGT  500

seq1  GTTAGGTTTCCCATTTATTGCTATCTTTTTTTTTCCCTGTGTTATATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGTTTCCCATTTATTGCTATCTTTTTTTTTCCCTGTGTTATATAGA  550

seq1  TTGATACTATCCCTGTGCTTTGTCATTATAAATGAACCTCTCTACCTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACTATCCCTGTGCTTTGTCATTATAAATGAACCTCTCTACCTCAA  600

seq1  GGTTGATTTCTGTCTTCAAATACATATCATCTGGCAAGCACACGGATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGATTTCTGTCTTCAAATACATATCATCTGGCAAGCACACGGATAAA  650

seq1  CTGATTTTATTGGGTTAATATTTGATTTGTGTGGGTTTTTTACCACTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTATTGGGTTAATATTTGATTTGTGTGGGTTTTTTACCACTTCA  700

seq1  TTTTTAATTCTGAATGTAATATATCCATGAACGTTAGATCTGTGTTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTCTGAATGTAATATATCCATGAACGTTAGATCTGTGTTCTCT  750

seq1  AAACACATGTATCTAGACTCGCTTTTAAAATGTACTTAAAATTTACATGT  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAACACATGTATCTAGACTCGCTTTTAAAATGTACTTTAAATTTACATGT  800

seq1  TTAGTTAATGTGCATG-TTTTTCAAGTAAGCAACATTAAAAATAAAACCA  849
      |||||||||||||||| |||||||||||||||||||||||||| ||||||
seq2  TTAGTTAATGTGCATGTTTTTTCAAGTAAGCAACATTAAAAAT-AAACCA  849

seq1  TATTAACATTTTATATCCACATAGTATATAATTTAATTTCCCCCACACAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAACATTTTATATCCACATAGTATATAATTTAATTTCCCCCACACAC  899

seq1  TAATATTTTACTCAGCTTCTGTAGAAGTGAAATTAGCAATTCCAAATACT  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAATATTTTACTCAGCTTCTGTAGGAGTGAAATTAGCAATTCCAAATACT  949

seq1  CTCTGGTACCCCTGTGTGTTTTTGTAGTTTTGGTGTTGTGTGACTATTGA  999
      |||||||| ||||||||| ||||||||||||||||||||||||||| |||
seq2  CTCTGGTA-CCCTGTGTG-TTTTGTAGTTTTGGTGTTGTGTGACTA-TGA  996

seq1  TCCTGGCCCATAGACTTACCTCTCATCCTTGACAGCTACTTACATGCCTC  1049
      | |||| ||||| |||||||||| || | |||||||||||||||||||||
seq2  T-CTGG-CCATA-ACTTACCTCT-AT-CGTGACAGCTACTTACATGCCTC  1041

seq1  CCACCTCTACTGCTTTTCATGCTGTGGACAGTCAGTGTGA  1089
      ||| ||| ||||| ||||||||||||||| | ||||||||
seq2  CCA-CTCAACTGC-TTTCATGCTGTGGAC-GACAGTGTGA  1078