BAC Information

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BAC

Clone NameB6Ng01-140F08
Chromosome14 (Build37)
Map Location 67,890,448 - 68,075,625
singlet/doubletdoublet
Overlap geneEbf2, EG628416, LOC100043046
Upstream genePtk2b, LOC100043676, Trim35, Stmn4, Adra1a, ENSMUSG00000057913, LOC668366, Dpysl2, EG432870, Pnma2, LOC672614, Bnip3l, Ppp2r2a
Downstream geneLOC100043056, Cdca2, Kctd9, Gnrh1, Dock5, Nefl, Nefm, LOC100043072
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140F08.bB6Ng01-140F08.g
ACCDH939093DH939094
length474111
definitionDH939093|Mus musculus domesticus DNA, BAC clone: B6Ng01-140F08, 5' end.DH939094|Mus musculus domesticus DNA, BAC clone: B6Ng01-140F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,075,146 - 68,075,625)(67,890,448 - 67,890,558)
sequence
ccttgtagatgaaagcgtttgtcagatatacattttaatctttacagagg
tacagggctgtttattttcatgtaggtaagatgggaagggctctgtggct
acacagcacctgaattctttcatgtgttgtatgtaggaggaattggaaaa
gagaggatgatcagttgtcacattttaaaattcagaagtaaaagcagaca
gatgtggtgatgtccagaagaatggcctctggggttcagttggattttga
tggaggtagaggaaaacaatgcacaggtctcgtggcccttgtccttgtca
gctctccctgatttgttgctctcctgtgtcaccctagcctttgcaggaaa
gggtcttctggggctggctgactgaaggtgactatcataagacatccttt
ccagatcccagcctgagggttcctcatcccttgacagaggcattggaaag
gtatagggaggggagagaagagga
aaatggtgagaagtgatctgaagagattatttatgaaaaatgttagtata
gataagggcagcatttaaagtctgtctatatttccttccttccttccttc
cttccttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_68075146_68075625
seq2: B6Ng01-140F08.b_50_529 (reverse)

seq1  TCCTCTTCTCTCCCCTCCCTATACCTTTCCAATGCCTCTGTCAAGGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCTCTCCCCTCCCTATACCTTTCCAATGCCTCTGTCAAGGGATG  50

seq1  AGGAACCCTCAGGCTGGGATCTGGAAAGGATGTCTTATGATAGTCACCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCCTCAGGCTGGGATCTGGAAAGGATGTCTTATGATAGTCACCTT  100

seq1  CAGTCAGCCAGCCCCAGAAGACCCTTTCCTGCAAAGGCTAGGGTGACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCCAGCCCCAGAAGACCCTTTCCTGCAAAGGCTAGGGTGACACA  150

seq1  GGAGAGCAACAAATCAGGGAGAGCTGACAAGGACAAGGGCCACGAGACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCAACAAATCAGGGAGAGCTGACAAGGACAAGGGCCACGAGACCT  200

seq1  GTGCATTGTTTTCCTCTACCTCCATCAAAATCCAACTGAACCCCAGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTGTTTTCCTCTACCTCCATCAAAATCCAACTGAACCCCAGAGGC  250

seq1  CATTCTTCTGGACATCACCACATCTGTCTGCTTTTACTTCTGAATTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTCTGGACATCACCACATCTGTCTGCTTTTACTTCTGAATTTTAA  300

seq1  AATGTGACAACTGATCATCCTCTCTTTTCCAATTCCTCCTACATACAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGACAACTGATCATCCTCTCTTTTCCAATTCCTCCTACATACAACA  350

seq1  CATGAAAGAATTCAGGTGCTGTGTAGCCACAGAGCCCTTCCCATCTTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGAATTCAGGTGCTGTGTAGCCACAGAGCCCTTCCCATCTTACC  400

seq1  TACATGAAAATAAACAGCCCTGTACCTCTGTAAAGATTAAAATGTATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAAAATAAACAGCCCTGTACCTCTGTAAAGATTAAAATGTATATC  450

seq1  TGACAAACGCTTTCATCTACAAGGGAATTC  480
      ||||||||||||||||||||||||||||||
seq2  TGACAAACGCTTTCATCTACAAGGGAATTC  480

seq1: chr14_67890448_67890558
seq2: B6Ng01-140F08.g_72_182

seq1  AAATGGTGAGAAGTGATCTGAAGAGATTATTTATGAAAAATGTTAGTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTGAGAAGTGATCTGAAGAGATTATTTATGAAAAATGTTAGTATA  50

seq1  GATAAGGGCAGCATTTAAAGTCTGTCTATATTTCCTTCCTTCCTTCCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGGGCAGCATTTAAAGTCTGTCTATATTTCCTTCCTTCCTTCCTTC  100

seq1  CTTCCTTCCTT  111
      |||||||||||
seq2  CTTCCTTCCTT  111