BAC Information

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BAC

Clone NameB6Ng01-141A13
Chromosome14 (Build37)
Map Location 10,349,315 - 10,350,357
singlet/doubletsinglet
Overlap genenone
Upstream gene4930452B06Rik, LOC100041948
Downstream geneFhit, LOC100042415
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141A13.bB6Ng01-141A13.g
ACCDH939604DH939605
length1,1961,023
definitionDH939604|Mus musculus domesticus DNA, BAC clone: B6Ng01-141A13, 5' end.DH939605|Mus musculus domesticus DNA, BAC clone: B6Ng01-141A13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttttgttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtctcatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccat
tttctcctctataagtttcagtgtctctggttttatgtggagttccttga
tccacttagatttgaccttaggacaaggagataggtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtggaagatcaaat
gaccataggtgtgtgggttcatttctgggtcttcaattctattccactgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggtacttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgagactgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttctcagagacttgaagtttatcatacat
atctttcactttcttattagagtcacaccagtatattttatgtatttgtg
actatgagagggtgttgtttccctaattcttctcagcctgtttattcttt
gtatagagaaaggccatgacttggttgagttatttatatccagctactca
cggagcctgttattaggttagggctcctggtgaatttaagggtcctataa
aatccatctatcactgcagaatggattttgactctcactgtccaatgtat
cccctgatctcctttgttgtcaatgtgctcggtgagacgtcatagc
gaattcatggcttgcggggatcagcactgtcctttctgtccatctgcttt
gacagcaattcctggatgctttactttcccctacactgtggcttttccaa
ggaacttaattggggtccatgtggtgtacataacaccctaatctaaggga
acactctgctagctcagtgttccacctaccccatcttctgtggtgcagat
ggcccttcttggtactgtgaaccaatagtgtcacctagtcagcctaattt
gggggctggtgcttccaggtgaattgaacttgactaataaagaaacaatg
cagaggaataagtaaatgctctatgactttgataggctgggtacctgcca
cccaagggaaggacctgtctgggggggctcatgtatattccatgtgagct
gctgctctgctgtgacctgtcatgctgggcaaaagtccttgttatatcct
attgtagtagctaggaaacaaggtatggctgtcagagtaagcaggacgtg
gacaggaatgaaagctttgctactgtcaagtcaggtgaggaaagagcatc
atcccaggccagaaaaagctcatgagctcaggtgaaggtttggtctcttt
ttgaaagagaatgacaagacttaggaacatttggtgtgagtatacaaatg
cacaactgtgaaaggaattctgcaagtcatgtgataagagctaaaccacc
ttcatttcttgaaatggtctagtctaccctatttgcttcttcccccatta
ccctgctttcccaaacctctgggaatgggtatgtcgtcaggactactgat
taagctcaaatgtggctctttcactgtaacgttgagatgacatggggaca
ttctggaaatgtgaagccatgggctagagccagtcctgaggggagggagg
tgttttcattttgacatcagtgtgtgtagaaagagtgctctgctgacctc
accaaactctgctttgtgacacttttcagctgaaatagccaagctgaaga
cgtcaggagtgatactgattcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_10349315_10350357
seq2: B6Ng01-141A13.g_68_1090 (reverse)

seq1  TCGAATTCAGTATCCACTCCTGACCTGTCTTTCAAGCTTTTGGCTATTCT  50
      ||||| ||||||| ||||||||||  |||||   |||  ||||||||| |
seq2  TCGAA-TCAGTAT-CACTCCTGAC--GTCTT--CAGC--TTGGCTATT-T  41

seq1  CAGCCTGGAAAGTTGTTCAACAAAGCAGAGGTTTGGGTGGAGGTCAGCAG  100
      ||| ||| |||| |||   |||||||||| ||||||   |||||||||||
seq2  CAG-CTGAAAAG-TGT--CACAAAGCAGA-GTTTGG--TGAGGTCAGCAG  84

seq1  AGCACTCTTTTCTACACACACTGATGTCAAAATGAAAACACCCTCCCTCC  150
      ||||||| |||||||||||||||||||||||||||||||| |||||||||
seq2  AGCACTC-TTTCTACACACACTGATGTCAAAATGAAAACA-CCTCCCTCC  132

seq1  CCTCAGGACTGGCTCTAGCCCATGGCCTTCACCATTTCCAGAATGTCCCC  200
      ||||||||||||||||||||||||| ||||| ||||||||||||||||||
seq2  CCTCAGGACTGGCTCTAGCCCATGG-CTTCA-CATTTCCAGAATGTCCCC  180

seq1  ATGTCATCTCAACGTTACAGTGAAAGAGCCACATTTGAGCTTAATCAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATCTCAACGTTACAGTGAAAGAGCCACATTTGAGCTTAATCAGTA  230

seq1  GTCCTGACGACATACCCATTCCCAGAGGTTTGGGAAAGCAGGGTAATGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGACGACATACCCATTCCCAGAGGTTTGGGAAAGCAGGGTAATGGG  280

seq1  GGAAGAAGCAAATAGGGTAGACTAGACCATTTCAAGAAATGAAGGTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGCAAATAGGGTAGACTAGACCATTTCAAGAAATGAAGGTGGTT  330

seq1  TAGCTCTTATCACATGACTTGCAGAATTCCTTTCACAGTTGTGCATTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTTATCACATGACTTGCAGAATTCCTTTCACAGTTGTGCATTTGT  380

seq1  ATACTCACACCAAATGTTCCTAAGTCTTGTCATTCTCTTTCAAAAAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCACACCAAATGTTCCTAAGTCTTGTCATTCTCTTTCAAAAAGAGA  430

seq1  CCAAACCTTCACCTGAGCTCATGAGCTTTTTCTGGCCTGGGATGATGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCTTCACCTGAGCTCATGAGCTTTTTCTGGCCTGGGATGATGCTC  480

seq1  TTTCCTCACCTGACTTGACAGTAGCAAAGCTTTCATTCCTGTCCACGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCACCTGACTTGACAGTAGCAAAGCTTTCATTCCTGTCCACGTCC  530

seq1  TGCTTACTCTGACAGCCATACCTTGTTTCCTAGCTACTACAATAGGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACTCTGACAGCCATACCTTGTTTCCTAGCTACTACAATAGGATAT  580

seq1  AACAAGGACTTTTGCCCAGCATGACAGGTCACAGCAGAGCAGCAGCTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGACTTTTGCCCAGCATGACAGGTCACAGCAGAGCAGCAGCTCAC  630

seq1  ATGGAATATACATGAGCCCCCCCAGACAGGTCCTTCCCTTGGGTGGCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATATACATGAGCCCCCCCAGACAGGTCCTTCCCTTGGGTGGCAGG  680

seq1  TACCCAGCCTATCAAAGTCATAGAGCATTTACTTATTCCTCTGCATTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGCCTATCAAAGTCATAGAGCATTTACTTATTCCTCTGCATTGTT  730

seq1  TCTTTATTAGTCAAGTTCAATTCACCTGGAAGCACCAGCCCCCAAATTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTAGTCAAGTTCAATTCACCTGGAAGCACCAGCCCCCAAATTAG  780

seq1  GCTGACTAGGTGACACTATTGGTTCACAGTACCAAGAAGGGCCATCTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTAGGTGACACTATTGGTTCACAGTACCAAGAAGGGCCATCTGCA  830

seq1  CCACAGAAGATGGGGTAGGTGGAACACTGAGCTAGCAGAGTGTTCCCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAAGATGGGGTAGGTGGAACACTGAGCTAGCAGAGTGTTCCCTTA  880

seq1  GATTAGGGTGTTATGTACACCACATGGACCCCAATTAAGTTCCTTGGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGGGTGTTATGTACACCACATGGACCCCAATTAAGTTCCTTGGAAA  930

seq1  AGCCACAGTGTAGGGGAAAGTAAAGCATCCAGGAATTGCTGTCAAAGCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAGTGTAGGGGAAAGTAAAGCATCCAGGAATTGCTGTCAAAGCAG  980

seq1  ATGGACAGAAAGGACAGTGCTGATCCCCGCAAGCCATGAATTC  1043
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAGAAAGGACAGTGCTGATCCCCGCAAGCCATGAATTC  1023